RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-223	ENST00000544268	CD3G	P09693	182 aa		13.6	□□□□□ -0.23
CHFR-223	ENST00000544268	SNRPB	P14678	240 aa	Known RBP	13.6	□□□□□ -0.23
CHFR-223	ENST00000544268	MPL	P40238	635 aa		13.6	□□□□□ -0.23
CHFR-223	ENST00000544268	TMEM44	Q2T9K0	475 aa		13.6	□□□□□ -0.23
CHFR-223	ENST00000544268	ACSM3	Q53FZ2	586 aa		13.6	□□□□□ -0.23
CHFR-223	ENST00000544268	IZUMO1	Q8IYV9	350 aa		13.6	□□□□□ -0.23
CHFR-223	ENST00000544268	SPIC	Q8N5J4	248 aa		13.6	□□□□□ -0.23
CHFR-223	ENST00000544268	VSTM2L	Q96N03	204 aa		13.6	□□□□□ -0.23
CHFR-223	ENST00000544268	TSSK2	Q96PF2	358 aa		13.6	□□□□□ -0.23
CHFR-223	ENST00000544268	DMRTA2	Q96SC8	542 aa		13.6	□□□□□ -0.23
CHFR-223	ENST00000544268	JAM3	Q9BX67	310 aa		13.6	□□□□□ -0.23
CHFR-223	ENST00000544268	BEX1	Q9HBH7	125 aa		13.6	□□□□□ -0.23
CHFR-223	ENST00000544268	DHCR7	Q9UBM7	475 aa	Known RBP	13.6	□□□□□ -0.23
CHFR-223	ENST00000544268	ERVK-19	Q9WJR5	959 aa		13.6	□□□□□ -0.23
CHFR-223	ENST00000544268	SLC22A31	A6NKX4	558 aa		13.6	□□□□□ -0.23
CHFR-223	ENST00000544268	PRR32	B1ATL7	298 aa		13.6	□□□□□ -0.23
CHFR-223	ENST00000544268		H3BSH0	61 aa		13.6	□□□□□ -0.23
CHFR-223	ENST00000544268	MT-ND5	P03915	603 aa		13.6	□□□□□ -0.23
CHFR-223	ENST00000544268	GIP	P09681	153 aa	Predicted RBP	13.6	□□□□□ -0.23
CHFR-223	ENST00000544268	SLC35E2	P0CK97	266 aa		13.6	□□□□□ -0.23
CHFR-223	ENST00000544268	CT45A8	P0DMV1	189 aa		13.6	□□□□□ -0.23
CHFR-223	ENST00000544268	CT45A9	P0DMV2	189 aa		13.6	□□□□□ -0.23
CHFR-223	ENST00000544268	GABRA1	P14867	456 aa		13.6	□□□□□ -0.23
CHFR-223	ENST00000544268	MMP15	P51511	669 aa		13.6	□□□□□ -0.23
CHFR-223	ENST00000544268	RAP2B	P61225	183 aa		13.6	□□□□□ -0.23
CHFR-223	ENST00000544268	STX4	Q12846	297 aa		13.6	□□□□□ -0.23
CHFR-223	ENST00000544268	SNTB2	Q13425	540 aa	Known RBP	13.6	□□□□□ -0.23
CHFR-223	ENST00000544268	SQSTM1	Q13501	440 aa		13.6	□□□□□ -0.23
CHFR-223	ENST00000544268	CT45A2	Q5DJT8	189 aa		13.6	□□□□□ -0.23
CHFR-223	ENST00000544268	RAB11FIP2	Q7L804	512 aa		13.6	□□□□□ -0.23
CHFR-223	ENST00000544268	KMT5C	Q86Y97	462 aa		13.6	□□□□□ -0.23
CHFR-223	ENST00000544268	FAM71C	Q8NEG0	241 aa		13.6	□□□□□ -0.23
CHFR-223	ENST00000544268	GCDH	Q92947	438 aa	Predicted RBP	13.6	□□□□□ -0.23
CHFR-223	ENST00000544268	FGF21	Q9NSA1	209 aa		13.6	□□□□□ -0.23
CHFR-223	ENST00000544268	ADAMTS20	P59510	1910 aa		13.6	□□□□□ -0.23
CHFR-223	ENST00000544268	ZNF749	O43361	778 aa		13.59	□□□□□ -0.23
CHFR-223	ENST00000544268	PLPP2	O43688	288 aa		13.59	□□□□□ -0.23
CHFR-223	ENST00000544268	FZD7	O75084	574 aa		13.59	□□□□□ -0.23
CHFR-223	ENST00000544268	HP	P00738	406 aa		13.59	□□□□□ -0.23
CHFR-223	ENST00000544268	PPP3CB	P16298	524 aa		13.59	□□□□□ -0.23
CHFR-223	ENST00000544268	OR1D4	P47884	311 aa		13.59	□□□□□ -0.23
CHFR-223	ENST00000544268	HFE	Q30201	348 aa		13.59	□□□□□ -0.23
CHFR-223	ENST00000544268	OR7E24	Q6IFN5	339 aa		13.59	□□□□□ -0.23
CHFR-223	ENST00000544268	ZNF613	Q6PF04	617 aa		13.59	□□□□□ -0.23
CHFR-223	ENST00000544268		Q6ZTK2	550 aa		13.59	□□□□□ -0.23
CHFR-223	ENST00000544268	OR5M9	Q8NGP3	310 aa		13.59	□□□□□ -0.23
CHFR-223	ENST00000544268	OR51Q1	Q8NH59	317 aa		13.59	□□□□□ -0.23
CHFR-223	ENST00000544268	C16orf52	Q8NHV5	167 aa		13.59	□□□□□ -0.23
CHFR-223	ENST00000544268	TRMT10A	Q8TBZ6	339 aa	Known RBP	13.59	□□□□□ -0.23
CHFR-223	ENST00000544268	IFI44	Q8TCB0	444 aa		13.59	□□□□□ -0.23
CHFR-223	ENST00000544268	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	13.59	□□□□□ -0.23
CHFR-223	ENST00000544268	NAT6	Q93015	286 aa		13.59	□□□□□ -0.23
CHFR-223	ENST00000544268	ZNF426	Q9BUY5	554 aa		13.59	□□□□□ -0.23
CHFR-223	ENST00000544268	C20orf85	Q9H1P6	137 aa		13.59	□□□□□ -0.23
CHFR-223	ENST00000544268	ST6GALNAC2	Q9UJ37	374 aa		13.59	□□□□□ -0.23
CHFR-223	ENST00000544268		R4GN57	208 aa		13.59	□□□□□ -0.23
CHFR-223	ENST00000544268		A0A1B0GWJ7	208 aa		13.59	□□□□□ -0.23
CHFR-223	ENST00000544268		H0YIG0	161 aa		13.59	□□□□□ -0.23
CHFR-223	ENST00000544268	SUSD5	O60279	629 aa		13.59	□□□□□ -0.23
CHFR-223	ENST00000544268	CLN5	O75503	358 aa		13.59	□□□□□ -0.23
CHFR-223	ENST00000544268	WISP1	O95388	367 aa		13.59	□□□□□ -0.23
CHFR-223	ENST00000544268	GDI2	P50395	445 aa	Known RBP	13.59	□□□□□ -0.23
CHFR-223	ENST00000544268	ERVK-25	P63136	954 aa		13.59	□□□□□ -0.23
CHFR-223	ENST00000544268	DYRK1A	Q13627	763 aa		13.59	□□□□□ -0.23
CHFR-223	ENST00000544268	GK2	Q14410	553 aa	Predicted RBP	13.59	□□□□□ -0.23
CHFR-223	ENST00000544268	ZNF501	Q96CX3	271 aa	Predicted RBP	13.59	□□□□□ -0.23
CHFR-223	ENST00000544268	PELI1	Q96FA3	418 aa		13.59	□□□□□ -0.23
CHFR-223	ENST00000544268	RBM18	Q96H35	190 aa	Known RBP	13.59	□□□□□ -0.23
CHFR-223	ENST00000544268	ARL5B	Q96KC2	179 aa		13.59	□□□□□ -0.23
CHFR-223	ENST00000544268	OR14A2	Q96R54	314 aa		13.59	□□□□□ -0.23
CHFR-223	ENST00000544268	MGAT4C	Q9UBM8	478 aa		13.59	□□□□□ -0.23
CHFR-223	ENST00000544268	CHRNA9	Q9UGM1	479 aa		13.59	□□□□□ -0.23
CHFR-223	ENST00000544268	IGHV5-10-1	A0A0J9YXX1	117 aa		13.58	□□□□□ -0.24
CHFR-223	ENST00000544268		A0A1B0GW55	424 aa		13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	OR6C68	A6NDL8	312 aa		13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	ANKRD61	A6NGH8	418 aa		13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	MT-ND4	P03905	459 aa		13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	IFNA4	P05014	189 aa		13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	GLA	P06280	429 aa		13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	ANKRD34C	P0C6C1	535 aa		13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	DUX4L2	P0CJ85	424 aa		13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	DUX4L3	P0CJ86	424 aa		13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	DUX4L4	P0CJ87	422 aa		13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	DUX4L5	P0CJ88	424 aa		13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	DUX4L6	P0CJ89	424 aa		13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	DUX4L7	P0CJ90	424 aa		13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	ATF1	P18846	271 aa		13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	RORA	P35398	523 aa		13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	PITPNA	Q00169	270 aa		13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	STPG1	Q5TH74	334 aa		13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	DMKN	Q6E0U4	476 aa	Predicted RBP	13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	TMUB2	Q71RG4	321 aa		13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	PRSS45	Q7RTY3	260 aa		13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	MAMDC2	Q7Z304	686 aa	Predicted RBP	13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	ZNF595	Q8IYB9	648 aa		13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	OR6K6	Q8NGW6	343 aa		13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	SEMA4C	Q9C0C4	833 aa		13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	DUX4	Q9UBX2	424 aa		13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	SERTAD3	Q9UJW9	196 aa		13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	MRPS33	Q9Y291	106 aa	Known RBP	13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms