RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 ARL8BQ9NVJ2 186 aa20.14■□□□□ 0.81
CHFR-222ENST00000544093 NDUFAF4Q9P032 175 aa20.14■□□□□ 0.81
CHFR-222ENST00000544093 CSPG4Q6UVK1 2322 aa20.14■□□□□ 0.81
CHFR-222ENST00000544093 RNF223E7ERA6 249 aa20.13■□□□□ 0.81
CHFR-222ENST00000544093 ZNF35P13682 527 aa20.13■□□□□ 0.81
CHFR-222ENST00000544093 PPOXP50336 477 aa20.13■□□□□ 0.81
CHFR-222ENST00000544093 SMIM11AP58511 58 aa20.13■□□□□ 0.81
CHFR-222ENST00000544093 CTXN1P60606 82 aa20.13■□□□□ 0.81
CHFR-222ENST00000544093 RPS23P62266 143 aaKnown RBP20.13■□□□□ 0.81
CHFR-222ENST00000544093 MXRA7P84157 204 aa20.13■□□□□ 0.81
CHFR-222ENST00000544093 GALK2Q01415 458 aa20.13■□□□□ 0.81
CHFR-222ENST00000544093 SNTB2Q13425 540 aaKnown RBP20.13■□□□□ 0.81
CHFR-222ENST00000544093 THEM4Q5T1C6 240 aa20.13■□□□□ 0.81
CHFR-222ENST00000544093 SLC16A14Q7RTX9 510 aa20.13■□□□□ 0.81
CHFR-222ENST00000544093 OR4K5Q8NGD3 323 aa20.13■□□□□ 0.81
CHFR-222ENST00000544093 OR51A7Q8NH64 312 aa20.13■□□□□ 0.81
CHFR-222ENST00000544093 SLC7A13Q8TCU3 470 aa20.13■□□□□ 0.81
CHFR-222ENST00000544093 RBP7Q96R05 134 aa20.13■□□□□ 0.81
CHFR-222ENST00000544093 KCNK17Q96T54 332 aa20.13■□□□□ 0.81
CHFR-222ENST00000544093 CDRT15Q96T59 188 aa20.13■□□□□ 0.81
CHFR-222ENST00000544093 KCNN2Q9H2S1 579 aa20.13■□□□□ 0.81
CHFR-222ENST00000544093 MYOZ1Q9NP98 299 aaPredicted RBP20.13■□□□□ 0.81
CHFR-222ENST00000544093 CD300AQ9UGN4 299 aa20.13■□□□□ 0.81
CHFR-222ENST00000544093 HIVEP2P31629 2446 aa20.13■□□□□ 0.81
CHFR-222ENST00000544093 TRAV27A0A087WT01 109 aa20.12■□□□□ 0.81
CHFR-222ENST00000544093 FAM107AO95990 144 aa20.12■□□□□ 0.81
CHFR-222ENST00000544093 ERCC1P07992 297 aaPredicted RBP20.12■□□□□ 0.81
CHFR-222ENST00000544093 TCN1P20061 433 aaPredicted RBP20.12■□□□□ 0.81
CHFR-222ENST00000544093 THBS4P35443 961 aa20.12■□□□□ 0.81
CHFR-222ENST00000544093 MRPS34P82930 218 aaKnown RBP20.12■□□□□ 0.81
CHFR-222ENST00000544093 LSM11P83369 360 aaKnown RBP eCLIP20.12■□□□□ 0.81
CHFR-222ENST00000544093 CD47Q08722 323 aa20.12■□□□□ 0.81
CHFR-222ENST00000544093 RBM15BQ8NDT2 890 aaKnown RBP20.12■□□□□ 0.81
CHFR-222ENST00000544093 OR10H5Q8NGA6 315 aa20.12■□□□□ 0.81
CHFR-222ENST00000544093 MCUR1Q96AQ8 359 aa20.12■□□□□ 0.81
CHFR-222ENST00000544093 MS4A3Q96HJ5 214 aa20.12■□□□□ 0.81
CHFR-222ENST00000544093 PYURFQ96I23 114 aa20.12■□□□□ 0.81
CHFR-222ENST00000544093 C7orf34Q96L11 122 aa20.12■□□□□ 0.81
CHFR-222ENST00000544093 NSMCE2Q96MF7 247 aa20.12■□□□□ 0.81
CHFR-222ENST00000544093 SIAEQ9HAT2 523 aa20.12■□□□□ 0.81
CHFR-222ENST00000544093 SLC7A8Q9UHI5 535 aa20.12■□□□□ 0.81
CHFR-222ENST00000544093 CMAHPQ9Y471 501 aa20.12■□□□□ 0.81
CHFR-222ENST00000544093 SLC22A23A1A5C7 686 aa20.11■□□□□ 0.81
CHFR-222ENST00000544093 SLC25A16P16260 332 aa20.11■□□□□ 0.81
CHFR-222ENST00000544093 FUT4P22083 530 aa20.11■□□□□ 0.81
CHFR-222ENST00000544093 GLRXP35754 106 aa20.11■□□□□ 0.81
CHFR-222ENST00000544093 GUCA1AP43080 201 aaPredicted RBP20.11■□□□□ 0.81
CHFR-222ENST00000544093 EVX1P49640 407 aa20.11■□□□□ 0.81
CHFR-222ENST00000544093 MYBPC1Q00872 1141 aa20.11■□□□□ 0.81
CHFR-222ENST00000544093 PLP2Q04941 152 aa20.11■□□□□ 0.81
CHFR-222ENST00000544093 TOP3AQ13472 1001 aaPredicted RBP20.11■□□□□ 0.81
CHFR-222ENST00000544093 ZBED5Q49AG3 693 aa20.11■□□□□ 0.81
CHFR-222ENST00000544093 FGD3Q5JSP0 725 aa20.11■□□□□ 0.81
CHFR-222ENST00000544093 KRT80Q6KB66 452 aa20.11■□□□□ 0.81
CHFR-222ENST00000544093 TBPL2Q6SJ96 375 aa20.11■□□□□ 0.81
CHFR-222ENST00000544093 TSEN54Q7Z6J9 526 aaKnown RBP20.11■□□□□ 0.81
CHFR-222ENST00000544093 DEFB107AQ8IZN7 70 aa20.11■□□□□ 0.81
CHFR-222ENST00000544093 LRRC75AQ8NAA5 344 aa20.11■□□□□ 0.81
CHFR-222ENST00000544093 OR13C2Q8NGS9 318 aa20.11■□□□□ 0.81
CHFR-222ENST00000544093 FAM168AQ92567 244 aa20.11■□□□□ 0.81
CHFR-222ENST00000544093 HDAC2Q92769 488 aaKnown RBP20.11■□□□□ 0.81
CHFR-222ENST00000544093 NMD3Q96D46 503 aaKnown RBP20.11■□□□□ 0.81
CHFR-222ENST00000544093 TNFRSF13CQ96RJ3 184 aa20.11■□□□□ 0.81
CHFR-222ENST00000544093 SH3GL3Q99963 347 aa20.11■□□□□ 0.81
CHFR-222ENST00000544093 RAB1BQ9H0U4 201 aa20.11■□□□□ 0.81
CHFR-222ENST00000544093 RNF121Q9H920 327 aa20.11■□□□□ 0.81
CHFR-222ENST00000544093 hCG_2039718K7EN88 272 aa20.1■□□□□ 0.81
CHFR-222ENST00000544093 AHCYL1O43865 530 aa20.1■□□□□ 0.81
CHFR-222ENST00000544093 RPL4P36578 427 aaKnown RBP20.1■□□□□ 0.81
CHFR-222ENST00000544093 GPR4P46093 362 aa20.1■□□□□ 0.81
CHFR-222ENST00000544093 VLDLRP98155 873 aa20.1■□□□□ 0.81
CHFR-222ENST00000544093 RAB39AQ14964 217 aa20.1■□□□□ 0.81
CHFR-222ENST00000544093 KRTAP21-3Q3LHN1 58 aa20.1■□□□□ 0.81
CHFR-222ENST00000544093 PODNL1Q6PEZ8 512 aa20.1■□□□□ 0.81
CHFR-222ENST00000544093 ARHGAP24Q8N264 748 aa20.1■□□□□ 0.81
CHFR-222ENST00000544093 OR1J2Q8NGS2 313 aa20.1■□□□□ 0.81
CHFR-222ENST00000544093 ZNF519Q8TB69 540 aa20.1■□□□□ 0.81
CHFR-222ENST00000544093 DHRS1Q96LJ7 313 aa20.1■□□□□ 0.81
CHFR-222ENST00000544093 LRMDAQ9H2I8 198 aa20.1■□□□□ 0.81
CHFR-222ENST00000544093 GRHPRQ9UBQ7 328 aa20.1■□□□□ 0.81
CHFR-222ENST00000544093 ZNF346Q9UL40 294 aaKnown RBP20.1■□□□□ 0.81
CHFR-222ENST00000544093 IQCMA0A1B0GVH7 501 aa20.09■□□□□ 0.81
CHFR-222ENST00000544093 NDUFS8O00217 210 aa20.09■□□□□ 0.81
CHFR-222ENST00000544093 ARPC2O15144 300 aa20.09■□□□□ 0.81
CHFR-222ENST00000544093 SLC2A10O95528 541 aa20.09■□□□□ 0.81
CHFR-222ENST00000544093 TP53P04637 393 aaPredicted RBP20.09■□□□□ 0.81
CHFR-222ENST00000544093 CD14P08571 375 aa20.09■□□□□ 0.81
CHFR-222ENST00000544093 FHL1Q13642 323 aa20.09■□□□□ 0.81
CHFR-222ENST00000544093 Q71RC1 249 aaPredicted RBP20.09■□□□□ 0.81
CHFR-222ENST00000544093 ZNF584Q8IVC4 421 aa20.09■□□□□ 0.81
CHFR-222ENST00000544093 FITM2Q8N6M3 262 aa20.09■□□□□ 0.81
CHFR-222ENST00000544093 ZNF525Q8N782 197 aa20.09■□□□□ 0.81
CHFR-222ENST00000544093 FAM86B1Q8N7N1 296 aa20.09■□□□□ 0.81
CHFR-222ENST00000544093 ARIH2OSQ8N7S6 290 aa20.09■□□□□ 0.81
CHFR-222ENST00000544093 SLC30A7Q8NEW0 376 aa20.09■□□□□ 0.81
CHFR-222ENST00000544093 POM121Q96HA1 1249 aa20.09■□□□□ 0.81
CHFR-222ENST00000544093 TSPAN32Q96QS1 320 aa20.09■□□□□ 0.81
CHFR-222ENST00000544093 VRK1Q99986 396 aaPredicted RBP20.09■□□□□ 0.81
CHFR-222ENST00000544093 CR1P17927 2039 aa20.09■□□□□ 0.81
CHFR-222ENST00000544093 XKRYO14609 159 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms