RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 LRBAP50851 2863 aa13.18□□□□□ -0.3
CD9-210ENST00000543916 NR2C1P13056 603 aa13.18□□□□□ -0.3
CD9-210ENST00000543916 ANXA8P13928 327 aa13.18□□□□□ -0.3
CD9-210ENST00000543916 HIST1H1CP16403 213 aaKnown RBP13.18□□□□□ -0.3
CD9-210ENST00000543916 ZNF23P17027 643 aa13.18□□□□□ -0.3
CD9-210ENST00000543916 CDAP32320 146 aa13.18□□□□□ -0.3
CD9-210ENST00000543916 DAPP51397 102 aa13.18□□□□□ -0.3
CD9-210ENST00000543916 ZNF84P51523 738 aa13.18□□□□□ -0.3
CD9-210ENST00000543916 ARHGDIAP52565 204 aa13.18□□□□□ -0.3
CD9-210ENST00000543916 UBE2NP61088 152 aaKnown RBP13.18□□□□□ -0.3
CD9-210ENST00000543916 SLC36A3Q495N2 470 aa13.18□□□□□ -0.3
CD9-210ENST00000543916 THEM4Q5T1C6 240 aa13.18□□□□□ -0.3
CD9-210ENST00000543916 SLC35F1Q5T1Q4 408 aa13.18□□□□□ -0.3
CD9-210ENST00000543916 FBXW10Q5XX13 1052 aa13.18□□□□□ -0.3
CD9-210ENST00000543916 SSX8Q7RTT4 187 aa13.18□□□□□ -0.3
CD9-210ENST00000543916 ADCK1Q86TW2 530 aa13.18□□□□□ -0.3
CD9-210ENST00000543916 HIPK1Q86Z02 1210 aa13.18□□□□□ -0.3
CD9-210ENST00000543916 SLC22A24Q8N4F4 322 aa13.18□□□□□ -0.3
CD9-210ENST00000543916 ATG16L2Q8NAA4 619 aa13.18□□□□□ -0.3
CD9-210ENST00000543916 OR4Q3Q8NH05 313 aa13.18□□□□□ -0.3
CD9-210ENST00000543916 FNDC8Q8TC99 324 aa13.18□□□□□ -0.3
CD9-210ENST00000543916 NSMAFQ92636 917 aa13.18□□□□□ -0.3
CD9-210ENST00000543916 CENPNQ96H22 339 aaPredicted RBP13.18□□□□□ -0.3
CD9-210ENST00000543916 RBP7Q96R05 134 aa13.18□□□□□ -0.3
CD9-210ENST00000543916 TSSK6Q9BXA6 273 aa13.18□□□□□ -0.3
CD9-210ENST00000543916 CLEC4MQ9H2X3 399 aaPredicted RBP13.18□□□□□ -0.3
CD9-210ENST00000543916 NGBQ9NPG2 151 aa13.18□□□□□ -0.3
CD9-210ENST00000543916 OBP2BQ9NPH6 170 aa13.18□□□□□ -0.3
CD9-210ENST00000543916 ZNF224Q9NZL3 707 aa13.18□□□□□ -0.3
CD9-210ENST00000543916 VSX1Q9NZR4 365 aaPredicted RBP13.18□□□□□ -0.3
CD9-210ENST00000543916 PRR14LQ5THK1 2151 aa13.18□□□□□ -0.3
CD9-210ENST00000543916 DPRXA6NFQ7 191 aa13.17□□□□□ -0.3
CD9-210ENST00000543916 ERICH4A6NGS2 130 aa13.17□□□□□ -0.3
CD9-210ENST00000543916 G3V2T6 193 aa13.17□□□□□ -0.3
CD9-210ENST00000543916 M0R1B8 84 aa13.17□□□□□ -0.3
CD9-210ENST00000543916 IDH3BO43837 385 aa13.17□□□□□ -0.3
CD9-210ENST00000543916 AHCYL1O43865 530 aa13.17□□□□□ -0.3
CD9-210ENST00000543916 WNT11O96014 354 aa13.17□□□□□ -0.3
CD9-210ENST00000543916 HLA-HP01893 362 aa13.17□□□□□ -0.3
CD9-210ENST00000543916 HOXB1P14653 301 aaPredicted RBP13.17□□□□□ -0.3
CD9-210ENST00000543916 NOS3P29474 1203 aa13.17□□□□□ -0.3
CD9-210ENST00000543916 BSPH1Q075Z2 132 aa13.17□□□□□ -0.3
CD9-210ENST00000543916 DBPQ10586 325 aaPredicted RBP13.17□□□□□ -0.3
CD9-210ENST00000543916 ETFDHQ16134 617 aa13.17□□□□□ -0.3
CD9-210ENST00000543916 NCMAPQ5T1S8 102 aa13.17□□□□□ -0.3
CD9-210ENST00000543916 C1QTNF12Q5T7M4 302 aa13.17□□□□□ -0.3
CD9-210ENST00000543916 CDC20BQ86Y33 519 aa13.17□□□□□ -0.3
CD9-210ENST00000543916 SKA3Q8IX90 412 aa13.17□□□□□ -0.3
CD9-210ENST00000543916 SDR9C7Q8NEX9 313 aa13.17□□□□□ -0.3
CD9-210ENST00000543916 OR4K13Q8NH42 304 aa13.17□□□□□ -0.3
CD9-210ENST00000543916 NABP1Q96AH0 204 aa13.17□□□□□ -0.3
CD9-210ENST00000543916 NMNAT3Q96T66 252 aa13.17□□□□□ -0.3
CD9-210ENST00000543916 SH3GL3Q99963 347 aa13.17□□□□□ -0.3
CD9-210ENST00000543916 GABARAPL1Q9H0R8 117 aa13.17□□□□□ -0.3
CD9-210ENST00000543916 SYT4Q9H2B2 425 aa13.17□□□□□ -0.3
CD9-210ENST00000543916 ZNF556Q9HAH1 456 aa13.17□□□□□ -0.3
CD9-210ENST00000543916 NOX3Q9HBY0 568 aa13.17□□□□□ -0.3
CD9-210ENST00000543916 S100A14Q9HCY8 104 aa13.17□□□□□ -0.3
CD9-210ENST00000543916 KIF17Q9P2E2 1029 aa13.17□□□□□ -0.3
CD9-210ENST00000543916 OAZ3Q9UMX2 235 aa13.17□□□□□ -0.3
CD9-210ENST00000543916 RAI1Q7Z5J4 1906 aaPredicted RBP13.17□□□□□ -0.3
CD9-210ENST00000543916 SAC3D1A6NKF1 404 aa13.16□□□□□ -0.3
CD9-210ENST00000543916 H3BN98 237 aa13.16□□□□□ -0.3
CD9-210ENST00000543916 PLAUP00749 431 aa13.16□□□□□ -0.3
CD9-210ENST00000543916 OSMP13725 252 aa13.16□□□□□ -0.3
CD9-210ENST00000543916 CTLA4P16410 223 aa13.16□□□□□ -0.3
CD9-210ENST00000543916 CAPZA2P47755 286 aa13.16□□□□□ -0.3
CD9-210ENST00000543916 NR1H2P55055 460 aa13.16□□□□□ -0.3
CD9-210ENST00000543916 MRPS34P82930 218 aaKnown RBP13.16□□□□□ -0.3
CD9-210ENST00000543916 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.16□□□□□ -0.3
CD9-210ENST00000543916 LEG1Q6P5S2 330 aa13.16□□□□□ -0.3
CD9-210ENST00000543916 FOXL2NBQ6ZUU3 175 aa13.16□□□□□ -0.3
CD9-210ENST00000543916 MDP1Q86V88 176 aa13.16□□□□□ -0.3
CD9-210ENST00000543916 JAZF1Q86VZ6 243 aa13.16□□□□□ -0.3
CD9-210ENST00000543916 ZDHHC13Q8IUH4 622 aa13.16□□□□□ -0.3
CD9-210ENST00000543916 C10orf67Q8IYJ2 551 aa13.16□□□□□ -0.3
CD9-210ENST00000543916 SVOPLQ8N434 492 aa13.16□□□□□ -0.3
CD9-210ENST00000543916 LNX2Q8N448 690 aa13.16□□□□□ -0.3
CD9-210ENST00000543916 IQCF1Q8N6M8 205 aa13.16□□□□□ -0.3
CD9-210ENST00000543916 ICA1LQ8NDH6 482 aa13.16□□□□□ -0.3
CD9-210ENST00000543916 OR52E2Q8NGJ4 325 aa13.16□□□□□ -0.3
CD9-210ENST00000543916 FGFBP3Q8TAT2 258 aa13.16□□□□□ -0.3
CD9-210ENST00000543916 TEX47Q8TBZ9 253 aa13.16□□□□□ -0.3
CD9-210ENST00000543916 FOXN4Q96NZ1 517 aa13.16□□□□□ -0.3
CD9-210ENST00000543916 TSSK2Q96PF2 358 aa13.16□□□□□ -0.3
CD9-210ENST00000543916 TMEM204Q9BSN7 226 aa13.16□□□□□ -0.3
CD9-210ENST00000543916 NUAK2Q9H093 628 aa13.16□□□□□ -0.3
CD9-210ENST00000543916 FN3KQ9H479 309 aa13.16□□□□□ -0.3
CD9-210ENST00000543916 ESRP2Q9H6T0 727 aaKnown RBP13.16□□□□□ -0.3
CD9-210ENST00000543916 B3GNT2Q9NY97 397 aa13.16□□□□□ -0.3
CD9-210ENST00000543916 ITPR2Q14571 2701 aa13.15□□□□□ -0.3
CD9-210ENST00000543916 IGHV1-18A0A0C4DH31 117 aa13.15□□□□□ -0.3
CD9-210ENST00000543916 A0A1W2PPL8 197 aa13.15□□□□□ -0.3
CD9-210ENST00000543916 DCTN6O00399 190 aa13.15□□□□□ -0.3
CD9-210ENST00000543916 SLC16A7O60669 478 aa13.15□□□□□ -0.3
CD9-210ENST00000543916 MITFO75030 526 aaPredicted RBP13.15□□□□□ -0.3
CD9-210ENST00000543916 SCG5P05408 212 aa13.15□□□□□ -0.3
CD9-210ENST00000543916 PATE4P0C8F1 98 aa13.15□□□□□ -0.3
CD9-210ENST00000543916 OR8G3PP0DMU2 310 aa13.15□□□□□ -0.3
CD9-210ENST00000543916 CD79AP11912 226 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms