RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 MDS2Q8NDY4 140 aa8.35□□□□□ -1.07
GNE-206ENST00000543356 FAM83FQ8NEG4 500 aaPredicted RBP8.35□□□□□ -1.07
GNE-206ENST00000543356 OR14L1PQ8NHC6 308 aa8.35□□□□□ -1.07
GNE-206ENST00000543356 C4orf36Q96KX1 117 aa8.35□□□□□ -1.07
GNE-206ENST00000543356 DACH2Q96NX9 599 aa8.35□□□□□ -1.07
GNE-206ENST00000543356 AGAP4Q96P64 663 aa8.35□□□□□ -1.07
GNE-206ENST00000543356 KCNK17Q96T54 332 aa8.35□□□□□ -1.07
GNE-206ENST00000543356 NUAK2Q9H093 628 aa8.35□□□□□ -1.07
GNE-206ENST00000543356 TSPAN10Q9H1Z9 355 aaPredicted RBP8.35□□□□□ -1.07
GNE-206ENST00000543356 SRA1Q9HD15 236 aaKnown RBP8.35□□□□□ -1.07
GNE-206ENST00000543356 CCDC59Q9P031 241 aaKnown RBP8.35□□□□□ -1.07
GNE-206ENST00000543356 KLHL13Q9P2N7 655 aa8.35□□□□□ -1.07
GNE-206ENST00000543356 SSR3Q9UNL2 185 aa8.35□□□□□ -1.07
GNE-206ENST00000543356 ZNF292O60281 2723 aa8.35□□□□□ -1.07
GNE-206ENST00000543356 OR5H15A6NDH6 313 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 ZNF670-ZNF695F2Z2N8 137 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 EIF1BO60739 113 aaKnown RBP8.34□□□□□ -1.07
GNE-206ENST00000543356 RFPL3SP0C7P2 107 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 GALP22466 123 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 CRABP1P29762 137 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 CBX5P45973 191 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 RPS25P62851 125 aaKnown RBP8.34□□□□□ -1.07
GNE-206ENST00000543356 CSNK2A1P68400 391 aaPredicted RBP8.34□□□□□ -1.07
GNE-206ENST00000543356 H3F3AP84243 136 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 MFAP5Q13361 173 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 SOWAHCQ53LP3 525 aaPredicted RBP8.34□□□□□ -1.07
GNE-206ENST00000543356 SHEQ5VZ18 495 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 VASNQ6EMK4 673 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 FAM122CQ6P4D5 195 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 DNM1P34Q6PK57 102 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 LINC00696Q6ZRV3 163 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 ASB18Q6ZVZ8 466 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 AKAP14Q86UN6 197 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 CDC20BQ86Y33 519 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 RFLNBQ8N5W9 214 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 ASCC1Q8N9N2 400 aaKnown RBP8.34□□□□□ -1.07
GNE-206ENST00000543356 SMAP2Q8WU79 429 aaPredicted RBP8.34□□□□□ -1.07
GNE-206ENST00000543356 KLHL15Q96M94 604 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 OXGR1Q96P68 337 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 B4GALT7Q9UBV7 327 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 CDV3Q9UKY7 258 aaKnown RBP8.34□□□□□ -1.07
GNE-206ENST00000543356 COPS3Q9UNS2 423 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 RASD1Q9Y272 281 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 DOCK10Q96BY6 2186 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 FAM171A2A8MVW0 826 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 LINC01387J3KSC0 135 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 TRAF3IP2O43734 574 aaPredicted RBP8.34□□□□□ -1.07
GNE-206ENST00000543356 NME2P1O60361 137 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 F10P00742 488 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 OPN1LWP04000 364 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 GAAP10253 952 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 BTF3P20290 206 aaKnown RBP8.34□□□□□ -1.07
GNE-206ENST00000543356 NME2P22392 152 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 GDF1P27539 372 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 OPRL1P41146 370 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 RUNX1T1Q06455 604 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 CLN3Q13286 438 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 TOMM20Q15388 145 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 LYPD4Q6UWN0 246 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 ZFP41Q8N8Y5 198 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 ZNF511Q8NB15 262 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 TRMT61AQ96FX7 289 aaKnown RBP8.34□□□□□ -1.07
GNE-206ENST00000543356 INTS14Q96SY0 518 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 ZNF703Q9H7S9 590 aaPredicted RBP8.34□□□□□ -1.07
GNE-206ENST00000543356 KLF13Q9Y2Y9 288 aaPredicted RBP8.34□□□□□ -1.07
GNE-206ENST00000543356 NCKAP5O14513 1909 aa8.34□□□□□ -1.07
GNE-206ENST00000543356 TRDV1A0A1B0GX56 115 aa8.33□□□□□ -1.08
GNE-206ENST00000543356 ZNF814B7Z6K7 855 aa8.33□□□□□ -1.08
GNE-206ENST00000543356 ATP6V1G2-DDX39BF2Z307 99 aa8.33□□□□□ -1.08
GNE-206ENST00000543356 J3QLW9 94 aa8.33□□□□□ -1.08
GNE-206ENST00000543356 DLL1O00548 723 aa8.33□□□□□ -1.08
GNE-206ENST00000543356 PHYHO14832 338 aa8.33□□□□□ -1.08
GNE-206ENST00000543356 NKX2-8O15522 239 aa8.33□□□□□ -1.08
GNE-206ENST00000543356 SLC16A7O60669 478 aa8.33□□□□□ -1.08
GNE-206ENST00000543356 HPNP05981 417 aa8.33□□□□□ -1.08
GNE-206ENST00000543356 CTLA4P16410 223 aa8.33□□□□□ -1.08
GNE-206ENST00000543356 ZNF19P17023 458 aa8.33□□□□□ -1.08
GNE-206ENST00000543356 CELP19835 753 aa8.33□□□□□ -1.08
GNE-206ENST00000543356 FGF9P31371 208 aaPredicted RBP8.33□□□□□ -1.08
GNE-206ENST00000543356 HCCSP53701 268 aa8.33□□□□□ -1.08
GNE-206ENST00000543356 OR12D2P58182 307 aa8.33□□□□□ -1.08
GNE-206ENST00000543356 TAGLNQ01995 201 aaKnown RBP8.33□□□□□ -1.08
GNE-206ENST00000543356 POU4F3Q15319 338 aa8.33□□□□□ -1.08
GNE-206ENST00000543356 TRAM1Q15629 374 aa8.33□□□□□ -1.08
GNE-206ENST00000543356 ZNF684Q5T5D7 378 aa8.33□□□□□ -1.08
GNE-206ENST00000543356 YRDCQ86U90 279 aaKnown RBP8.33□□□□□ -1.08
GNE-206ENST00000543356 GGNQ86UU5 652 aa8.33□□□□□ -1.08
GNE-206ENST00000543356 SULF2Q8IWU5 870 aa8.33□□□□□ -1.08
GNE-206ENST00000543356 SFXN2Q96NB2 322 aa8.33□□□□□ -1.08
GNE-206ENST00000543356 NAA11Q9BSU3 229 aaPredicted RBP8.33□□□□□ -1.08
GNE-206ENST00000543356 MFRPQ9BY79 579 aa8.33□□□□□ -1.08
GNE-206ENST00000543356 SLIRPQ9GZT3 109 aaKnown RBP8.33□□□□□ -1.08
GNE-206ENST00000543356 RNF167Q9H6Y7 350 aa8.33□□□□□ -1.08
GNE-206ENST00000543356 WDR76Q9H967 626 aa8.33□□□□□ -1.08
GNE-206ENST00000543356 EXOSC4Q9NPD3 245 aaKnown RBP8.33□□□□□ -1.08
GNE-206ENST00000543356 POLE4Q9NR33 117 aa8.33□□□□□ -1.08
GNE-206ENST00000543356 TXNL4BQ9NX01 149 aaKnown RBP8.33□□□□□ -1.08
GNE-206ENST00000543356 MED29Q9NX70 200 aa8.33□□□□□ -1.08
GNE-206ENST00000543356 PLA2G3Q9NZ20 509 aa8.33□□□□□ -1.08
GNE-206ENST00000543356 TMEM14AQ9Y6G1 99 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms