RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 TIPARPQ7Z3E1 657 aaKnown RBP12.69□□□□□ -0.38
LDB3-207ENST00000542786 LRRTM1Q86UE6 522 aa12.69□□□□□ -0.38
LDB3-207ENST00000542786 OR10AC1Q8NH08 325 aa12.69□□□□□ -0.38
LDB3-207ENST00000542786 OR5AK2Q8NH90 309 aa12.69□□□□□ -0.38
LDB3-207ENST00000542786 RNF128Q8TEB7 428 aa12.69□□□□□ -0.38
LDB3-207ENST00000542786 CMKLR1Q99788 373 aa12.69□□□□□ -0.38
LDB3-207ENST00000542786 ELOVL3Q9HB03 270 aa12.69□□□□□ -0.38
LDB3-207ENST00000542786 SERINC1Q9NRX5 453 aa12.69□□□□□ -0.38
LDB3-207ENST00000542786 SACM1LQ9NTJ5 587 aa12.69□□□□□ -0.38
LDB3-207ENST00000542786 COA3Q9Y2R0 106 aaPredicted RBP12.69□□□□□ -0.38
LDB3-207ENST00000542786 PCDHGA9Q9Y5G4 932 aaKnown RBP12.69□□□□□ -0.38
LDB3-207ENST00000542786 LINC00854A0A1B0GVQ3 168 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 A0A1W2PNU3 283 aaPredicted RBP12.68□□□□□ -0.38
LDB3-207ENST00000542786 NPIPA5E9PKD4 350 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 SRSF10O75494 262 aaKnown RBP12.68□□□□□ -0.38
LDB3-207ENST00000542786 MPZL1O95297 269 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 CCL3P10147 92 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 ADRA2CP18825 462 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 ADH6P28332 368 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 KIR2DL3P43628 341 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 POU3F1Q03052 451 aaPredicted RBP12.68□□□□□ -0.38
LDB3-207ENST00000542786 WDR38Q5JTN6 314 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 TEX30Q5JUR7 227 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 PRAMEF20Q5VT98 475 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 AGAP6Q5VW22 663 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 SLC18B1Q6NT16 456 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 C3orf33Q6P1S2 294 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 LRRN1Q6UXK5 716 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 ZNF454Q8N9F8 522 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 OR5M1Q8NGP8 315 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 PAQR8Q8TEZ7 354 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 ZC3HAV1LQ96H79 300 aaKnown RBP12.68□□□□□ -0.38
LDB3-207ENST00000542786 AGAP4Q96P64 663 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 DCBLD2Q96PD2 775 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 ABHD1Q96SE0 405 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 MRPL13Q9BYD1 178 aaKnown RBP12.68□□□□□ -0.38
LDB3-207ENST00000542786 SLC25A18Q9H1K4 315 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 MED29Q9NX70 200 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 NPIPA1Q9UND3 350 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 TMEM212A6NML5 194 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 CENPBD1B2RD01 187 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 ZNF814B7Z6K7 855 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 MASP2O00187 686 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 TRAF3IP2O43734 574 aaPredicted RBP12.68□□□□□ -0.38
LDB3-207ENST00000542786 LANCL1O43813 399 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 PNPP00491 289 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 CSRP1P21291 193 aaKnown RBP12.68□□□□□ -0.38
LDB3-207ENST00000542786 CCR9P51686 369 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 Q0VFX4 171 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 DCAF12Q5T6F0 453 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 CDCP2Q5VXM1 449 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 PLCZ1Q86YW0 608 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 ZNF679Q8IYX0 411 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 GTPBP8Q8N3Z3 284 aaPredicted RBP12.68□□□□□ -0.38
LDB3-207ENST00000542786 ZNF248Q8NDW4 579 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 OR4K17Q8NGC6 315 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 NSMAFQ92636 917 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 HPS1Q92902 700 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 C5orf34Q96MH7 638 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 WACQ9BTA9 647 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 ABHD6Q9BV23 337 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 ZNF160Q9HCG1 818 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 SPATA2Q9UM82 520 aa12.68□□□□□ -0.38
LDB3-207ENST00000542786 RALGAPA1Q6GYQ0 2036 aa12.67□□□□□ -0.38
LDB3-207ENST00000542786 A0A087WZY1 265 aa12.67□□□□□ -0.38
LDB3-207ENST00000542786 IFITM5A6NNB3 132 aa12.67□□□□□ -0.38
LDB3-207ENST00000542786 AIPO00170 330 aa12.67□□□□□ -0.38
LDB3-207ENST00000542786 CDX4O14627 284 aaPredicted RBP12.67□□□□□ -0.38
LDB3-207ENST00000542786 SLC43A1O75387 559 aa12.67□□□□□ -0.38
LDB3-207ENST00000542786 ZNF432O94892 652 aa12.67□□□□□ -0.38
LDB3-207ENST00000542786 IGHEP01854 428 aa12.67□□□□□ -0.38
LDB3-207ENST00000542786 HLA-DQA2P01906 255 aa12.67□□□□□ -0.38
LDB3-207ENST00000542786 SPARCP09486 303 aa12.67□□□□□ -0.38
LDB3-207ENST00000542786 DPP4P27487 766 aa12.67□□□□□ -0.38
LDB3-207ENST00000542786 MAP2K3P46734 347 aa12.67□□□□□ -0.38
LDB3-207ENST00000542786 PITPNBP48739 271 aa12.67□□□□□ -0.38
LDB3-207ENST00000542786 GLO1Q04760 184 aa12.67□□□□□ -0.38
LDB3-207ENST00000542786 MFGE8Q08431 387 aaPredicted RBP12.67□□□□□ -0.38
LDB3-207ENST00000542786 RASGEF1BQ0VAM2 473 aa12.67□□□□□ -0.38
LDB3-207ENST00000542786 CARTPTQ16568 116 aa12.67□□□□□ -0.38
LDB3-207ENST00000542786 TRIQKQ629K1 86 aa12.67□□□□□ -0.38
LDB3-207ENST00000542786 DND1Q8IYX4 353 aaKnown RBP12.67□□□□□ -0.38
LDB3-207ENST00000542786 LGALS14Q8TCE9 139 aa12.67□□□□□ -0.38
LDB3-207ENST00000542786 ST7LQ8TDW4 575 aa12.67□□□□□ -0.38
LDB3-207ENST00000542786 CT55Q8WUE5 264 aa12.67□□□□□ -0.38
LDB3-207ENST00000542786 MCHR2Q969V1 340 aa12.67□□□□□ -0.38
LDB3-207ENST00000542786 ZBTB8AQ96BR9 441 aa12.67□□□□□ -0.38
LDB3-207ENST00000542786 SMAD5Q99717 465 aaKnown RBP12.67□□□□□ -0.38
LDB3-207ENST00000542786 MMP28Q9H239 520 aa12.67□□□□□ -0.38
LDB3-207ENST00000542786 CDCP1Q9H5V8 836 aa12.67□□□□□ -0.38
LDB3-207ENST00000542786 NPAP1Q9NZP6 1156 aa12.67□□□□□ -0.38
LDB3-207ENST00000542786 RPH3AQ9Y2J0 694 aaPredicted RBP12.67□□□□□ -0.38
LDB3-207ENST00000542786 NCOR1O75376 2440 aa12.67□□□□□ -0.38
LDB3-207ENST00000542786 WDR87Q6ZQQ6 2873 aa12.66□□□□□ -0.38
LDB3-207ENST00000542786 NSG1A0A0A6YYJ2 146 aa12.66□□□□□ -0.38
LDB3-207ENST00000542786 A0A0B4J293 547 aa12.66□□□□□ -0.38
LDB3-207ENST00000542786 A0A1B0GVC2 190 aa12.66□□□□□ -0.38
LDB3-207ENST00000542786 A6NIN4 97 aa12.66□□□□□ -0.38
LDB3-207ENST00000542786 GPR171O14626 319 aa12.66□□□□□ -0.38
LDB3-207ENST00000542786 PDCD5O14737 125 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms