RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 MICU2Q8IYU8 434 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 PRR22Q8IZ63 422 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 GTPBP8Q8N3Z3 284 aaPredicted RBP3.93□□□□□ -1.78
MDM2-228ENST00000542502 ZNF843Q8N446 348 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 LSMEM1Q8N8F7 131 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 FADS6Q8N9I5 356 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 OR5D16Q8NGK9 328 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 OR10A6Q8NH74 314 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 OR14L1PQ8NHC6 308 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 NEIL3Q8TAT5 605 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 PNPT1Q8TCS8 783 aaKnown RBP3.93□□□□□ -1.78
MDM2-228ENST00000542502 DNAJA4Q8WW22 397 aaPredicted RBP3.93□□□□□ -1.78
MDM2-228ENST00000542502 RAB8BQ92930 207 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 MCUR1Q96AQ8 359 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 SNRNP40Q96DI7 357 aaKnown RBP3.93□□□□□ -1.78
MDM2-228ENST00000542502 AURKBQ96GD4 344 aaPredicted RBP3.93□□□□□ -1.78
MDM2-228ENST00000542502 TMEM19Q96HH6 336 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 JSRP1Q96MG2 331 aaPredicted RBP3.93□□□□□ -1.78
MDM2-228ENST00000542502 GPR137Q96N19 417 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 ZNF583Q96ND8 569 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 ZFP3Q96NJ6 502 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 KCTD14Q9BQ13 255 aaPredicted RBP3.93□□□□□ -1.78
MDM2-228ENST00000542502 SLX1AQ9BQ83 275 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 BTBD10Q9BSF8 475 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 POLDIP3Q9BY77 421 aaKnown RBP3.93□□□□□ -1.78
MDM2-228ENST00000542502 TTTY12Q9BZ98 90 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 OR2B2Q9GZK3 357 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 SLC38A1Q9H2H9 487 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 UBQLN3Q9H347 655 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 EXO5Q9H790 373 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 YY1AP1Q9H869 796 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 GORASP2Q9H8Y8 452 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 ANKRA2Q9H9E1 313 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 LIN28AQ9H9Z2 209 aaKnown RBP3.93□□□□□ -1.78
MDM2-228ENST00000542502 FANCFQ9NPI8 374 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 SLC25A37Q9NYZ2 338 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 TMEM181Q9P2C4 612 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 RPS6KB2Q9UBS0 482 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 MKLN1Q9UL63 735 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 PCDHGB5Q9Y5G0 923 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 AP4B1Q9Y6B7 739 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 FASNP49327 2511 aaKnown RBP3.93□□□□□ -1.78
MDM2-228ENST00000542502 ZNF407Q9C0G0 2248 aa3.93□□□□□ -1.78
MDM2-228ENST00000542502 FREM3P0C091 2139 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 PLSCR5A0PG75 271 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 M0QX08 132 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 FXYD1O00168 92 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 AP3D1O14617 1153 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 ZNF208O43345 1280 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 SCO2O43819 266 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 OR2T1O43869 369 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 FCMRO60667 390 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 EIF1BO60739 113 aaKnown RBP3.92□□□□□ -1.78
MDM2-228ENST00000542502 ZNF354AO60765 605 aaPredicted RBP3.92□□□□□ -1.78
MDM2-228ENST00000542502 TIPRLO75663 272 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 KRT36O76013 467 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 MFN2O95140 757 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 F10P00742 488 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 IGKV1D-16P01601 117 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 CRHP06850 196 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 HEXAP06865 529 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 SPARCP09486 303 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 UMPSP11172 480 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 ABOP16442 354 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 POU1F1P28069 291 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 KDELR2P33947 212 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 ARL3P36405 182 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 SLC1A3P43003 542 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 DNASE1L1P49184 302 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 POLR2HP52434 150 aaKnown RBP3.92□□□□□ -1.78
MDM2-228ENST00000542502 DLX5P56178 289 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 RGS8P57771 180 aaPredicted RBP3.92□□□□□ -1.78
MDM2-228ENST00000542502 MTPNP58546 118 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 SELENOWP63302 87 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 CSNK2A1P68400 391 aaPredicted RBP3.92□□□□□ -1.78
MDM2-228ENST00000542502 ARF1P84077 181 aaKnown RBP3.92□□□□□ -1.78
MDM2-228ENST00000542502 LIPEQ05469 1076 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 TRAP1Q12931 704 aaKnown RBP3.92□□□□□ -1.78
MDM2-228ENST00000542502 SELENBP1Q13228 472 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 SKP2Q13309 424 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 SOWAHCQ53LP3 525 aaPredicted RBP3.92□□□□□ -1.78
MDM2-228ENST00000542502 CCNJQ5T5M9 372 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 MRPL2Q5T653 305 aaKnown RBP3.92□□□□□ -1.78
MDM2-228ENST00000542502 PRAMEF20Q5VT98 475 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 C3orf33Q6P1S2 294 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 ZNF613Q6PF04 617 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 ULK3Q6PHR2 472 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 C16orf47Q6ZP98 133 aaPredicted RBP3.92□□□□□ -1.78
MDM2-228ENST00000542502 Q6ZPB1 254 aaPredicted RBP3.92□□□□□ -1.78
MDM2-228ENST00000542502 Q6ZSV7 163 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 SLC46A3Q7Z3Q1 461 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 GRINAQ7Z429 371 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 MARCH3Q86UD3 253 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 SIAH3Q8IW03 269 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 MSRB3Q8IXL7 192 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 DEFB107AQ8IZN7 70 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 SLC43A2Q8N370 569 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 LINC00471Q8N535 108 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 TMEM251Q8N6I4 163 aa3.92□□□□□ -1.78
MDM2-228ENST00000542502 TMCO5AQ8N6Q1 288 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms