RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 ICMTO60725 284 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 RGS11O94810 467 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 RBMXP38159 391 aaKnown RBP14.66□□□□□ -0.06
VARS2-212ENST00000542001 CXCL12P48061 93 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 PRICKLE4Q2TBC4 344 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 GPR139Q6DWJ6 353 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 MAFIPQ8WZ33 124 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 GIMAP5Q96F15 307 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 CRISPLD2Q9H0B8 497 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 ASF1BQ9NVP2 202 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 WNT1P04628 370 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 ADRA2AP08913 450 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 HTR2CP28335 458 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 FMODQ06828 376 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 TDGQ13569 410 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 TOMM34Q15785 309 aaPredicted RBP14.66□□□□□ -0.06
VARS2-212ENST00000542001 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.66□□□□□ -0.06
VARS2-212ENST00000542001 MDGA2Q7Z553 956 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 PDZD9Q8IXQ8 264 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 C12orf45Q8N5I9 185 aaPredicted RBP14.66□□□□□ -0.06
VARS2-212ENST00000542001 OR5L2Q8NGL0 311 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 OR10K1Q8NGX5 313 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 SLC46A1Q96NT5 459 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 NPIPB8E9PQR5 432 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 JMJD7P0C870 316 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 KIR2DL1P43626 348 aaPredicted RBP14.66□□□□□ -0.06
VARS2-212ENST00000542001 HSD17B7P56937 341 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 GPR85P60893 370 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 EEF1A1P68104 462 aaKnown RBP14.66□□□□□ -0.06
VARS2-212ENST00000542001 UNQ6126/PRO20091Q6UXV3 157 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 FAM109AQ8N4B1 249 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 TSNAXQ99598 290 aaKnown RBP14.66□□□□□ -0.06
VARS2-212ENST00000542001 RABL2AQ9UBK7 228 aaPredicted RBP14.66□□□□□ -0.06
VARS2-212ENST00000542001 KCNN3Q9UGI6 736 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 TP53BP1Q12888 1972 aaPredicted RBP14.66□□□□□ -0.06
VARS2-212ENST00000542001 A0A0B4J2E0 115 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 A0A1B0GX12 115 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 TRIM64A6NGJ6 449 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 MPZL1O95297 269 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 S100A6P06703 90 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 PSG6Q00889 435 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 SLC22A8Q8TCC7 542 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 STT3BQ8TCJ2 826 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 DDIT4LQ96D03 193 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 SLC41A2Q96JW4 573 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 FKRPQ9H9S5 495 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 FSCN3Q9NQT6 498 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 CACNA1HO95180 2353 aa14.66□□□□□ -0.06
VARS2-212ENST00000542001 DOCK9Q9BZ29 2069 aa14.65□□□□□ -0.06
VARS2-212ENST00000542001 CIB4A0PJX0 185 aa14.65□□□□□ -0.06
VARS2-212ENST00000542001 CCR9P51686 369 aa14.65□□□□□ -0.06
VARS2-212ENST00000542001 TAS2R20P59543 309 aa14.65□□□□□ -0.06
VARS2-212ENST00000542001 CD226Q15762 336 aa14.65□□□□□ -0.06
VARS2-212ENST00000542001 TMEM201Q5SNT2 666 aa14.65□□□□□ -0.06
VARS2-212ENST00000542001 STEAP1BQ6NZ63 245 aa14.65□□□□□ -0.06
VARS2-212ENST00000542001 Q6ZTK2 550 aa14.65□□□□□ -0.06
VARS2-212ENST00000542001 ZPLD1Q8TCW7 415 aa14.65□□□□□ -0.06
VARS2-212ENST00000542001 ELP5Q8TE02 316 aa14.65□□□□□ -0.06
VARS2-212ENST00000542001 SFXN2Q96NB2 322 aa14.65□□□□□ -0.06
VARS2-212ENST00000542001 HIST1H2AAQ96QV6 131 aa14.65□□□□□ -0.06
VARS2-212ENST00000542001 ADGRL4Q9HBW9 690 aa14.65□□□□□ -0.06
VARS2-212ENST00000542001 TAS2R8Q9NYW2 309 aa14.65□□□□□ -0.06
VARS2-212ENST00000542001 C14orf166Q9Y224 244 aaKnown RBP14.65□□□□□ -0.06
VARS2-212ENST00000542001 LOC285556D6RIA3 1793 aa14.65□□□□□ -0.06
VARS2-212ENST00000542001 A0A1W2PPC4 97 aa14.65□□□□□ -0.06
VARS2-212ENST00000542001 C1QBP02746 253 aa14.65□□□□□ -0.06
VARS2-212ENST00000542001 SEMG1P04279 462 aa14.65□□□□□ -0.06
VARS2-212ENST00000542001 MLC1Q15049 377 aa14.65□□□□□ -0.06
VARS2-212ENST00000542001 TMEM91Q6ZNR0 172 aa14.65□□□□□ -0.06
VARS2-212ENST00000542001 OR7G1Q8NGA0 311 aa14.65□□□□□ -0.06
VARS2-212ENST00000542001 OR10AC1Q8NH08 325 aa14.65□□□□□ -0.06
VARS2-212ENST00000542001 ZBTB8AQ96BR9 441 aa14.65□□□□□ -0.06
VARS2-212ENST00000542001 URM1Q9BTM9 101 aaKnown RBP14.65□□□□□ -0.06
VARS2-212ENST00000542001 SLC23A1Q9UHI7 598 aa14.65□□□□□ -0.06
VARS2-212ENST00000542001 TRAV36DV7A0A075B6V5 113 aa14.65□□□□□ -0.06
VARS2-212ENST00000542001 TMEM82A0PJX8 343 aa14.65□□□□□ -0.06
VARS2-212ENST00000542001 CD3DP04234 171 aa14.65□□□□□ -0.06
VARS2-212ENST00000542001 STAC2Q6ZMT1 411 aa14.65□□□□□ -0.06
VARS2-212ENST00000542001 TRAPPC6BQ86SZ2 158 aa14.65□□□□□ -0.06
VARS2-212ENST00000542001 CRIPAKQ8N1N5 446 aa14.65□□□□□ -0.06
VARS2-212ENST00000542001 RELL2Q8NC24 303 aaPredicted RBP14.65□□□□□ -0.06
VARS2-212ENST00000542001 STEAP2Q8NFT2 490 aa14.65□□□□□ -0.06
VARS2-212ENST00000542001 NUDCD2Q8WVJ2 157 aa14.65□□□□□ -0.06
VARS2-212ENST00000542001 DCUN1D4Q92564 292 aa14.65□□□□□ -0.06
VARS2-212ENST00000542001 C3orf49Q96BT1 292 aa14.65□□□□□ -0.06
VARS2-212ENST00000542001 IGHV3-64DA0A0J9YX35 117 aa14.64□□□□□ -0.07
VARS2-212ENST00000542001 A0A1W2PQF6 199 aa14.64□□□□□ -0.07
VARS2-212ENST00000542001 IFNA21P01568 189 aa14.64□□□□□ -0.07
VARS2-212ENST00000542001 CLDN17P56750 224 aa14.64□□□□□ -0.07
VARS2-212ENST00000542001 FZD2Q14332 565 aa14.64□□□□□ -0.07
VARS2-212ENST00000542001 FAM69AQ5T7M9 428 aa14.64□□□□□ -0.07
VARS2-212ENST00000542001 SLC16A9Q7RTY1 509 aa14.64□□□□□ -0.07
VARS2-212ENST00000542001 TMEM185AQ8NFB2 350 aa14.64□□□□□ -0.07
VARS2-212ENST00000542001 NUDT9Q9BW91 350 aa14.64□□□□□ -0.07
VARS2-212ENST00000542001 ZNF442Q9H7R0 627 aa14.64□□□□□ -0.07
VARS2-212ENST00000542001 APMAPQ9HDC9 416 aa14.64□□□□□ -0.07
VARS2-212ENST00000542001 HRASLSQ9HDD0 168 aa14.64□□□□□ -0.07
VARS2-212ENST00000542001 CYSLTR2Q9NS75 346 aa14.64□□□□□ -0.07
VARS2-212ENST00000542001 DNAJB12Q9NXW2 375 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms