RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 PPIL3Q9H2H8 161 aaKnown RBP7.79□□□□□ -1.16
THBS3-210ENST00000541576 ZNF552Q9H707 407 aaPredicted RBP7.79□□□□□ -1.16
THBS3-210ENST00000541576 SMURF1Q9HCE7 757 aa7.79□□□□□ -1.16
THBS3-210ENST00000541576 MCUBQ9NWR8 336 aa7.79□□□□□ -1.16
THBS3-210ENST00000541576 SLC23A1Q9UHI7 598 aa7.79□□□□□ -1.16
THBS3-210ENST00000541576 HDGFL3Q9Y3E1 203 aa7.79□□□□□ -1.16
THBS3-210ENST00000541576 A0A1W2PNR3 127 aa7.79□□□□□ -1.16
THBS3-210ENST00000541576 OR6C68A6NDL8 312 aa7.79□□□□□ -1.16
THBS3-210ENST00000541576 FABP12A6NFH5 140 aa7.79□□□□□ -1.16
THBS3-210ENST00000541576 ATP6V1G2-DDX39BF2Z307 99 aa7.79□□□□□ -1.16
THBS3-210ENST00000541576 ZNF780AO75290 641 aaPredicted RBP7.79□□□□□ -1.16
THBS3-210ENST00000541576 TRAPPC6AO75865 159 aa7.79□□□□□ -1.16
THBS3-210ENST00000541576 TOXO94900 526 aa7.79□□□□□ -1.16
THBS3-210ENST00000541576 NAT2P11245 290 aa7.79□□□□□ -1.16
THBS3-210ENST00000541576 SLC2A5P22732 501 aa7.79□□□□□ -1.16
THBS3-210ENST00000541576 GDF1P27539 372 aa7.79□□□□□ -1.16
THBS3-210ENST00000541576 SHC1P29353 583 aa7.79□□□□□ -1.16
THBS3-210ENST00000541576 RPS19P39019 145 aaKnown RBP7.79□□□□□ -1.16
THBS3-210ENST00000541576 CDKN2AP42771 156 aaKnown RBP7.79□□□□□ -1.16
THBS3-210ENST00000541576 RGS6P49758 472 aa7.79□□□□□ -1.16
THBS3-210ENST00000541576 ARG2P78540 354 aa7.79□□□□□ -1.16
THBS3-210ENST00000541576 C19orf57Q0VDD7 668 aa7.79□□□□□ -1.16
THBS3-210ENST00000541576 DEFB109BQ30KR1 87 aa7.79□□□□□ -1.16
THBS3-210ENST00000541576 ZNF57Q68EA5 555 aaPredicted RBP7.79□□□□□ -1.16
THBS3-210ENST00000541576 LEG1Q6P5S2 330 aa7.79□□□□□ -1.16
THBS3-210ENST00000541576 SULF2Q8IWU5 870 aa7.79□□□□□ -1.16
THBS3-210ENST00000541576 ZNF248Q8NDW4 579 aa7.79□□□□□ -1.16
THBS3-210ENST00000541576 ZNRF4Q8WWF5 429 aa7.79□□□□□ -1.16
THBS3-210ENST00000541576 CRELD1Q96HD1 420 aa7.79□□□□□ -1.16
THBS3-210ENST00000541576 C5orf34Q96MH7 638 aa7.79□□□□□ -1.16
THBS3-210ENST00000541576 TEAD3Q99594 435 aa7.79□□□□□ -1.16
THBS3-210ENST00000541576 MGLLQ99685 303 aa7.79□□□□□ -1.16
THBS3-210ENST00000541576 BCL7BQ9BQE9 202 aa7.79□□□□□ -1.16
THBS3-210ENST00000541576 RNF32Q9H0A6 362 aa7.79□□□□□ -1.16
THBS3-210ENST00000541576 CHST11Q9NPF2 352 aa7.79□□□□□ -1.16
THBS3-210ENST00000541576 ZNF222Q9UK12 451 aa7.79□□□□□ -1.16
THBS3-210ENST00000541576 ZNF346Q9UL40 294 aaKnown RBP7.79□□□□□ -1.16
THBS3-210ENST00000541576 B3GALT5Q9Y2C3 310 aa7.79□□□□□ -1.16
THBS3-210ENST00000541576 LSM2Q9Y333 95 aaKnown RBP7.79□□□□□ -1.16
THBS3-210ENST00000541576 LOC400499M0QZD8 3231 aa7.79□□□□□ -1.16
THBS3-210ENST00000541576 KLK10O43240 276 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 AKR7A3O95154 331 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 CDRT1O95170 752 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 SP1P08047 785 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 CD46P15529 392 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 MYL12AP19105 171 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 TUBA1BP68363 451 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 GPR50Q13585 617 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 ACKR1Q16570 336 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 TATDN3Q17R31 274 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 RNLSQ5VYX0 342 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 SLC25A25Q6KCM7 469 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 TUBA1AQ71U36 451 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 KDM8Q8N371 416 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 NANOGP1Q8N7R0 232 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 ZFP41Q8N8Y5 198 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 MDS2Q8NDY4 140 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 OR51G2Q8NGK0 314 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 ST8SIA2Q92186 375 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 SMPDL3BQ92485 455 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 HAS2Q92819 552 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 DHRS9Q9BPW9 319 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 ZNF649Q9BS31 505 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.78□□□□□ -1.16
THBS3-210ENST00000541576 B4GALT7Q9UBV7 327 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 EXOGQ9Y2C4 368 aaKnown RBP7.78□□□□□ -1.16
THBS3-210ENST00000541576 KLF13Q9Y2Y9 288 aaPredicted RBP7.78□□□□□ -1.16
THBS3-210ENST00000541576 FAM240BA0A1B0GVZ2 78 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 A0A1W2PRG6 482 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 MS4A18H0YCH9 400 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 J3QRE1 110 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 SULT2B1O00204 365 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 XKRYO14609 159 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 NME2P1O60361 137 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 FZD7O75084 574 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 LIMS3P0CW19 117 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 LIMS4P0CW20 117 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 NME2P22392 152 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 CD79BP40259 229 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 B3GALT5-AS1P59052 145 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 RAC1P63000 192 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 LGALS3BPQ08380 585 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 ZP4Q12836 540 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 MS4A18Q3C1V0 323 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 MESTQ5EB52 335 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 LIPKQ5VXJ0 399 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 TMPPEQ6ZT21 453 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 ASB18Q6ZVZ8 466 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 GALNTL5Q7Z4T8 443 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 LHFPL3Q86UP9 236 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 FDCSPQ8NFU4 85 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 OR51L1Q8NGJ5 315 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 SMAP2Q8WU79 429 aaPredicted RBP7.78□□□□□ -1.16
THBS3-210ENST00000541576 MIB2Q96AX9 1013 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 SFXN2Q96NB2 322 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 TXNIPQ9H3M7 391 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 TNFRSF10DQ9UBN6 386 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 KCNN3Q9UGI6 736 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 CLEC4AQ9UMR7 237 aa7.78□□□□□ -1.16
THBS3-210ENST00000541576 TRAPPC4Q9Y296 219 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms