RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 CENPBD1B2RD01 187 aa12.69□□□□□ -0.38
CYB561A3-216ENST00000540755 H0YC42 278 aa12.69□□□□□ -0.38
CYB561A3-216ENST00000540755 SMAD9O15198 467 aaKnown RBP12.69□□□□□ -0.38
CYB561A3-216ENST00000540755 CXCL13O43927 109 aa12.69□□□□□ -0.38
CYB561A3-216ENST00000540755 GABARAPO95166 117 aa12.69□□□□□ -0.38
CYB561A3-216ENST00000540755 ACTL6AO96019 429 aa12.69□□□□□ -0.38
CYB561A3-216ENST00000540755 TFP02787 698 aa12.69□□□□□ -0.38
CYB561A3-216ENST00000540755 SCG5P05408 212 aa12.69□□□□□ -0.38
CYB561A3-216ENST00000540755 HSMCR30P0CW71 290 aa12.69□□□□□ -0.38
CYB561A3-216ENST00000540755 CD97P48960 835 aa12.69□□□□□ -0.38
CYB561A3-216ENST00000540755 ZNF85Q03923 595 aa12.69□□□□□ -0.38
CYB561A3-216ENST00000540755 TLE1Q04724 770 aa12.69□□□□□ -0.38
CYB561A3-216ENST00000540755 ACSM1Q08AH1 577 aa12.69□□□□□ -0.38
CYB561A3-216ENST00000540755 DOC2BQ14184 412 aa12.69□□□□□ -0.38
CYB561A3-216ENST00000540755 SLC17A1Q14916 467 aa12.69□□□□□ -0.38
CYB561A3-216ENST00000540755 TIMM50Q3ZCQ8 353 aa12.69□□□□□ -0.38
CYB561A3-216ENST00000540755 OR2G6Q5TZ20 316 aa12.69□□□□□ -0.38
CYB561A3-216ENST00000540755 DNM1P34Q6PK57 102 aa12.69□□□□□ -0.38
CYB561A3-216ENST00000540755 SLC35F2Q8IXU6 374 aa12.69□□□□□ -0.38
CYB561A3-216ENST00000540755 UBQLNLQ8IYU4 475 aa12.69□□□□□ -0.38
CYB561A3-216ENST00000540755 MEIOBQ8N635 442 aa12.69□□□□□ -0.38
CYB561A3-216ENST00000540755 FNDC8Q8TC99 324 aa12.69□□□□□ -0.38
CYB561A3-216ENST00000540755 UCN2Q96RP3 112 aa12.69□□□□□ -0.38
CYB561A3-216ENST00000540755 ALG8Q9BVK2 526 aa12.69□□□□□ -0.38
CYB561A3-216ENST00000540755 NAA50Q9GZZ1 169 aaKnown RBP12.69□□□□□ -0.38
CYB561A3-216ENST00000540755 PAQR5Q9NXK6 330 aaPredicted RBP12.69□□□□□ -0.38
CYB561A3-216ENST00000540755 USP9YO00507 2555 aaPredicted RBP12.69□□□□□ -0.38
CYB561A3-216ENST00000540755 ALPK2Q86TB3 2170 aa12.68□□□□□ -0.38
CYB561A3-216ENST00000540755 IGHV3-15A0A0B4J1V0 119 aa12.68□□□□□ -0.38
CYB561A3-216ENST00000540755 FAM171A2A8MVW0 826 aa12.68□□□□□ -0.38
CYB561A3-216ENST00000540755 CCRL2O00421 344 aa12.68□□□□□ -0.38
CYB561A3-216ENST00000540755 SELENOFO60613 162 aa12.68□□□□□ -0.38
CYB561A3-216ENST00000540755 SLC16A7O60669 478 aa12.68□□□□□ -0.38
CYB561A3-216ENST00000540755 IGHG1P01857 330 aa12.68□□□□□ -0.38
CYB561A3-216ENST00000540755 PGA4P0DJD7 388 aa12.68□□□□□ -0.38
CYB561A3-216ENST00000540755 PGA3P0DJD8 388 aa12.68□□□□□ -0.38
CYB561A3-216ENST00000540755 CTLA4P16410 223 aa12.68□□□□□ -0.38
CYB561A3-216ENST00000540755 CD36P16671 472 aa12.68□□□□□ -0.38
CYB561A3-216ENST00000540755 NAA10P41227 235 aaPredicted RBP12.68□□□□□ -0.38
CYB561A3-216ENST00000540755 CAPZA2P47755 286 aa12.68□□□□□ -0.38
CYB561A3-216ENST00000540755 EIF1AXP47813 144 aaKnown RBP12.68□□□□□ -0.38
CYB561A3-216ENST00000540755 RGS6P49758 472 aa12.68□□□□□ -0.38
CYB561A3-216ENST00000540755 HSF2Q03933 536 aa12.68□□□□□ -0.38
CYB561A3-216ENST00000540755 RNFT1Q5M7Z0 435 aa12.68□□□□□ -0.38
CYB561A3-216ENST00000540755 ABLIM2Q6H8Q1 611 aa12.68□□□□□ -0.38
CYB561A3-216ENST00000540755 ZNF322Q6U7Q0 402 aaPredicted RBP12.68□□□□□ -0.38
CYB561A3-216ENST00000540755 TMPRSS11AQ6ZMR5 421 aa12.68□□□□□ -0.38
CYB561A3-216ENST00000540755 SLC16A12Q6ZSM3 486 aa12.68□□□□□ -0.38
CYB561A3-216ENST00000540755 SLC16A9Q7RTY1 509 aa12.68□□□□□ -0.38
CYB561A3-216ENST00000540755 P2RY8Q86VZ1 359 aa12.68□□□□□ -0.38
CYB561A3-216ENST00000540755 WDFY1Q8IWB7 410 aa12.68□□□□□ -0.38
CYB561A3-216ENST00000540755 TIGD4Q8IY51 512 aa12.68□□□□□ -0.38
CYB561A3-216ENST00000540755 ZNF511Q8NB15 262 aa12.68□□□□□ -0.38
CYB561A3-216ENST00000540755 NOXO1Q8NFA2 376 aa12.68□□□□□ -0.38
CYB561A3-216ENST00000540755 OR9K2Q8NGE7 335 aa12.68□□□□□ -0.38
CYB561A3-216ENST00000540755 NEIL3Q8TAT5 605 aa12.68□□□□□ -0.38
CYB561A3-216ENST00000540755 ABTB1Q969K4 478 aaPredicted RBP12.68□□□□□ -0.38
CYB561A3-216ENST00000540755 SLC25A44Q96H78 314 aaPredicted RBP12.68□□□□□ -0.38
CYB561A3-216ENST00000540755 MNTQ99583 582 aa12.68□□□□□ -0.38
CYB561A3-216ENST00000540755 TIMP4Q99727 224 aa12.68□□□□□ -0.38
CYB561A3-216ENST00000540755 TRGV5A0A0B4J1U4 118 aa12.67□□□□□ -0.38
CYB561A3-216ENST00000540755 A0A1W2PQL4 384 aaPredicted RBP12.67□□□□□ -0.38
CYB561A3-216ENST00000540755 SLC35F4A4IF30 521 aa12.67□□□□□ -0.38
CYB561A3-216ENST00000540755 ZNF726A6NNF4 738 aa12.67□□□□□ -0.38
CYB561A3-216ENST00000540755 VGLL3A8MV65 326 aa12.67□□□□□ -0.38
CYB561A3-216ENST00000540755 NPIPA2E9PIF3 369 aa12.67□□□□□ -0.38
CYB561A3-216ENST00000540755 NPIPA3F8WFD2 350 aa12.67□□□□□ -0.38
CYB561A3-216ENST00000540755 NR2C1P13056 603 aa12.67□□□□□ -0.38
CYB561A3-216ENST00000540755 CD79BP40259 229 aa12.67□□□□□ -0.38
CYB561A3-216ENST00000540755 RPS3AP61247 264 aaKnown RBP12.67□□□□□ -0.38
CYB561A3-216ENST00000540755 BDH1Q02338 343 aa12.67□□□□□ -0.38
CYB561A3-216ENST00000540755 ZNF169Q14929 603 aaPredicted RBP12.67□□□□□ -0.38
CYB561A3-216ENST00000540755 TSTQ16762 297 aaKnown RBP12.67□□□□□ -0.38
CYB561A3-216ENST00000540755 THEM4Q5T1C6 240 aa12.67□□□□□ -0.38
CYB561A3-216ENST00000540755 VASNQ6EMK4 673 aa12.67□□□□□ -0.38
CYB561A3-216ENST00000540755 LYPD4Q6UWN0 246 aa12.67□□□□□ -0.38
CYB561A3-216ENST00000540755 CREB3L2Q70SY1 520 aa12.67□□□□□ -0.38
CYB561A3-216ENST00000540755 SPRYD4Q8WW59 207 aaPredicted RBP12.67□□□□□ -0.38
CYB561A3-216ENST00000540755 RBP7Q96R05 134 aa12.67□□□□□ -0.38
CYB561A3-216ENST00000540755 TBX5Q99593 518 aa12.67□□□□□ -0.38
CYB561A3-216ENST00000540755 EMC6Q9BV81 110 aa12.67□□□□□ -0.38
CYB561A3-216ENST00000540755 LIPGQ9Y5X9 500 aa12.67□□□□□ -0.38
CYB561A3-216ENST00000540755 TFECO14948 347 aaPredicted RBP12.66□□□□□ -0.38
CYB561A3-216ENST00000540755 AKAP8O43823 692 aaKnown RBP12.66□□□□□ -0.38
CYB561A3-216ENST00000540755 CYTIPO60759 359 aa12.66□□□□□ -0.38
CYB561A3-216ENST00000540755 KHDRBS3O75525 346 aaKnown RBP12.66□□□□□ -0.38
CYB561A3-216ENST00000540755 IGHG3P01860 377 aa12.66□□□□□ -0.38
CYB561A3-216ENST00000540755 CPEP16870 476 aa12.66□□□□□ -0.38
CYB561A3-216ENST00000540755 ZNF24P17028 368 aa12.66□□□□□ -0.38
CYB561A3-216ENST00000540755 PTGS2P35354 604 aa12.66□□□□□ -0.38
CYB561A3-216ENST00000540755 CLDN17P56750 224 aa12.66□□□□□ -0.38
CYB561A3-216ENST00000540755 CLRN1P58418 232 aa12.66□□□□□ -0.38
CYB561A3-216ENST00000540755 ACTA2P62736 377 aa12.66□□□□□ -0.38
CYB561A3-216ENST00000540755 ACTG2P63267 376 aa12.66□□□□□ -0.38
CYB561A3-216ENST00000540755 TUBA1BP68363 451 aa12.66□□□□□ -0.38
CYB561A3-216ENST00000540755 PMP22Q01453 160 aa12.66□□□□□ -0.38
CYB561A3-216ENST00000540755 GLO1Q04760 184 aa12.66□□□□□ -0.38
CYB561A3-216ENST00000540755 CAMK2DQ13557 499 aa12.66□□□□□ -0.38
CYB561A3-216ENST00000540755 SSX1Q16384 188 aa12.66□□□□□ -0.38
CYB561A3-216ENST00000540755 GDPGP1Q6ZNW5 385 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms