RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 WFDC6Q9BQY6 131 aa6.2□□□□□ -1.42
YBX3-209ENST00000540747 C1QTNF5Q9BXJ0 243 aa6.2□□□□□ -1.42
YBX3-209ENST00000540747 ULBP2Q9BZM5 246 aa6.2□□□□□ -1.42
YBX3-209ENST00000540747 MMADHCQ9H3L0 296 aaPredicted RBP6.2□□□□□ -1.42
YBX3-209ENST00000540747 ZMAT3Q9HA38 289 aaKnown RBP6.2□□□□□ -1.42
YBX3-209ENST00000540747 NTN4Q9HB63 628 aa6.2□□□□□ -1.42
YBX3-209ENST00000540747 B3GAT2Q9NPZ5 323 aa6.2□□□□□ -1.42
YBX3-209ENST00000540747 PNPOQ9NVS9 261 aa6.2□□□□□ -1.42
YBX3-209ENST00000540747 THUMPD1Q9NXG2 353 aaKnown RBP6.2□□□□□ -1.42
YBX3-209ENST00000540747 TAAR3PQ9P1P4 343 aa6.2□□□□□ -1.42
YBX3-209ENST00000540747 DUSP13Q9UII6 198 aa6.2□□□□□ -1.42
YBX3-209ENST00000540747 ZNF232Q9UNY5 417 aa6.2□□□□□ -1.42
YBX3-209ENST00000540747 POFUT2Q9Y2G5 429 aa6.2□□□□□ -1.42
YBX3-209ENST00000540747 POLR3KQ9Y2Y1 108 aaPredicted RBP6.2□□□□□ -1.42
YBX3-209ENST00000540747 SLC22A23A1A5C7 686 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 DNAJC9-AS1A6NH13 148 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 CLDN25C9JDP6 229 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 LRRN3E7EW58 273 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 CLDN34H7C241 214 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 TPST1O60507 370 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 SNNO75324 88 aaPredicted RBP6.19□□□□□ -1.42
YBX3-209ENST00000540747 LYPD3O95274 346 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 BCL10O95999 233 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 IGHV3-13P01766 116 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 IL6P05231 212 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 RNASE1P07998 156 aaKnown RBP6.19□□□□□ -1.42
YBX3-209ENST00000540747 ADH4P08319 380 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 CBLP22681 906 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 ZFP36P26651 326 aaKnown RBP6.19□□□□□ -1.42
YBX3-209ENST00000540747 CSNK1A1P48729 337 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 MMP15P51511 669 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 KLF3P57682 345 aaPredicted RBP6.19□□□□□ -1.42
YBX3-209ENST00000540747 GALK2Q01415 458 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 CAMK2DQ13557 499 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 RGNQ15493 299 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 NKPD1Q17RQ9 610 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 ALKBH6Q3KRA9 238 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 NRN1LQ496H8 165 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 ALG10BQ5I7T1 473 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 RGS7BPQ6MZT1 257 aaPredicted RBP6.19□□□□□ -1.42
YBX3-209ENST00000540747 ULK3Q6PHR2 472 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 LINC00114Q6XXX2 140 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 USP51Q70EK9 711 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 SNX32Q86XE0 403 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 MSRB3Q8IXL7 192 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 C10orf111Q8N326 155 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 SLC22A24Q8N4F4 322 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 SIGLECL1Q8N7X8 197 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 SLC30A7Q8NEW0 376 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 BHLHE22Q8NFJ8 381 aaPredicted RBP6.19□□□□□ -1.42
YBX3-209ENST00000540747 OR6X1Q8NH79 312 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 ZNF519Q8TB69 540 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 SYNPRQ8TBG9 265 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 C22orf15Q8WYQ4 148 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 GTF2H4Q92759 462 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 MAL2Q969L2 176 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 MAELQ96JY0 434 aaKnown RBP6.19□□□□□ -1.42
YBX3-209ENST00000540747 ZNF48Q96MX3 618 aaPredicted RBP6.19□□□□□ -1.42
YBX3-209ENST00000540747 SEPHS2Q99611 448 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 TMEM43Q9BTV4 400 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 PAIP1Q9H074 479 aaKnown RBP6.19□□□□□ -1.42
YBX3-209ENST00000540747 SLITRK2Q9H156 845 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 ARMC7Q9H6L4 198 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 WDR55Q9H6Y2 383 aaPredicted RBP6.19□□□□□ -1.42
YBX3-209ENST00000540747 C7orf69Q9H7B7 122 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 UNKLQ9H9P5 680 aaKnown RBP6.19□□□□□ -1.42
YBX3-209ENST00000540747 SDR39U1Q9NRG7 319 aaPredicted RBP6.19□□□□□ -1.42
YBX3-209ENST00000540747 TMEM38BQ9NVV0 291 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 SLCO1C1Q9NYB5 712 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 TAS2R1Q9NYW7 299 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 ZNF69Q9UC07 566 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 NKX1-2Q9UD57 310 aaPredicted RBP6.19□□□□□ -1.42
YBX3-209ENST00000540747 TESQ9UGI8 421 aaKnown RBP6.19□□□□□ -1.42
YBX3-209ENST00000540747 LEF1Q9UJU2 399 aaPredicted RBP6.19□□□□□ -1.42
YBX3-209ENST00000540747 PPIAL4AQ9Y536 164 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 LRRC42Q9Y546 428 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 GMEB1Q9Y692 573 aa6.19□□□□□ -1.42
YBX3-209ENST00000540747 POM121CA8CG34 1229 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 DHHO43323 396 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 ICMTO60725 284 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 ENTPD5O75356 428 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 IGHV1-46P01743 117 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 MMP7P09237 267 aaPredicted RBP6.18□□□□□ -1.42
YBX3-209ENST00000540747 FAM157BP0CG42 384 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 PGA4P0DJD7 388 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 PGA3P0DJD8 388 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 OR8G3PP0DMU2 310 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 CCL2P13500 99 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 ZNF12P17014 697 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 MAKP20794 623 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 FPR2P25090 351 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 EPHA3P29320 983 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 VHLP40337 213 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 ZNF133P52736 654 aaPredicted RBP6.18□□□□□ -1.42
YBX3-209ENST00000540747 UCP2P55851 309 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 TEKQ02763 1124 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 SLC34A1Q06495 639 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 FADDQ13158 208 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 PMS2P3Q13401 168 aa6.18□□□□□ -1.42
YBX3-209ENST00000540747 KPNB1Q14974 876 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms