RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 M0R3G1 203 aa9.4□□□□□ -0.9
ATL3-204ENST00000540699 SULT2B1O00204 365 aa9.4□□□□□ -0.9
ATL3-204ENST00000540699 SMAD9O15198 467 aaKnown RBP9.4□□□□□ -0.9
ATL3-204ENST00000540699 TNFSF13O75888 250 aa9.4□□□□□ -0.9
ATL3-204ENST00000540699 SEC14L2O76054 403 aa9.4□□□□□ -0.9
ATL3-204ENST00000540699 AQP8O94778 261 aa9.4□□□□□ -0.9
ATL3-204ENST00000540699 SYNGR4O95473 234 aa9.4□□□□□ -0.9
ATL3-204ENST00000540699 FADS2O95864 444 aaKnown RBP9.4□□□□□ -0.9
ATL3-204ENST00000540699 TMIGD3P0DMS9 266 aaPredicted RBP9.4□□□□□ -0.9
ATL3-204ENST00000540699 CTSSP25774 331 aa9.4□□□□□ -0.9
ATL3-204ENST00000540699 CDKN2AP42771 156 aaKnown RBP9.4□□□□□ -0.9
ATL3-204ENST00000540699 MTNR1AP48039 350 aa9.4□□□□□ -0.9
ATL3-204ENST00000540699 SLC25A1P53007 311 aa9.4□□□□□ -0.9
ATL3-204ENST00000540699 GP2P55259 537 aaKnown RBP9.4□□□□□ -0.9
ATL3-204ENST00000540699 PUDPQ08623 228 aa9.4□□□□□ -0.9
ATL3-204ENST00000540699 RAB40BQ12829 278 aa9.4□□□□□ -0.9
ATL3-204ENST00000540699 KRR1Q13601 381 aaKnown RBP9.4□□□□□ -0.9
ATL3-204ENST00000540699 RAB39AQ14964 217 aa9.4□□□□□ -0.9
ATL3-204ENST00000540699 KLHL22Q53GT1 634 aa9.4□□□□□ -0.9
ATL3-204ENST00000540699 MESTQ5EB52 335 aa9.4□□□□□ -0.9
ATL3-204ENST00000540699 ARMC4Q5T2S8 1044 aa9.4□□□□□ -0.9
ATL3-204ENST00000540699 SYT6Q5T7P8 510 aaPredicted RBP9.4□□□□□ -0.9
ATL3-204ENST00000540699 EEF1A1P5Q5VTE0 462 aa9.4□□□□□ -0.9
ATL3-204ENST00000540699 UBE2UQ5VVX9 321 aa9.4□□□□□ -0.9
ATL3-204ENST00000540699 ABLIM2Q6H8Q1 611 aa9.4□□□□□ -0.9
ATL3-204ENST00000540699 LIX1LQ8IVB5 337 aa9.4□□□□□ -0.9
ATL3-204ENST00000540699 CYB561A3Q8NBI2 242 aa9.4□□□□□ -0.9
ATL3-204ENST00000540699 OR13F1Q8NGS4 319 aa9.4□□□□□ -0.9
ATL3-204ENST00000540699 RNFT2Q96EX2 444 aa9.4□□□□□ -0.9
ATL3-204ENST00000540699 TMEM80Q96HE8 168 aa9.4□□□□□ -0.9
ATL3-204ENST00000540699 SNX18Q96RF0 628 aa9.4□□□□□ -0.9
ATL3-204ENST00000540699 SFXN3Q9BWM7 321 aa9.4□□□□□ -0.9
ATL3-204ENST00000540699 JAM3Q9BX67 310 aa9.4□□□□□ -0.9
ATL3-204ENST00000540699 FAM192AQ9GZU8 254 aa9.4□□□□□ -0.9
ATL3-204ENST00000540699 TXNIPQ9H3M7 391 aa9.4□□□□□ -0.9
ATL3-204ENST00000540699 VCX3AQ9NNX9 186 aa9.4□□□□□ -0.9
ATL3-204ENST00000540699 GLRX2Q9NS18 164 aa9.4□□□□□ -0.9
ATL3-204ENST00000540699 HAO2Q9NYQ3 351 aa9.4□□□□□ -0.9
ATL3-204ENST00000540699 NDUFA13Q9P0J0 144 aa9.4□□□□□ -0.9
ATL3-204ENST00000540699 B3GAT1Q9P2W7 334 aa9.4□□□□□ -0.9
ATL3-204ENST00000540699 WARS2Q9UGM6 360 aaKnown RBP9.4□□□□□ -0.9
ATL3-204ENST00000540699 ZNF346Q9UL40 294 aaKnown RBP9.4□□□□□ -0.9
ATL3-204ENST00000540699 DIMT1Q9UNQ2 313 aaKnown RBP9.4□□□□□ -0.9
ATL3-204ENST00000540699 LSM2Q9Y333 95 aaKnown RBP9.4□□□□□ -0.9
ATL3-204ENST00000540699 ALPK2Q86TB3 2170 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 SLC22A31A6NKX4 558 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 ZNF99A8MXY4 864 aaPredicted RBP9.39□□□□□ -0.91
ATL3-204ENST00000540699 ZNF814B7Z6K7 855 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 C11orf98E9PRG8 122 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 RNF13O43567 381 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 EIF1BO60739 113 aaKnown RBP9.39□□□□□ -0.91
ATL3-204ENST00000540699 CYTIPO60759 359 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 SS18L1O75177 396 aaPredicted RBP9.39□□□□□ -0.91
ATL3-204ENST00000540699 INMTO95050 263 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 AKR7A3O95154 331 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 RAB36O95755 333 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 PTHP01270 115 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 IGHA1P01876 353 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 CLUP10909 449 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 KLK2P20151 261 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 PAICSP22234 425 aaKnown RBP9.39□□□□□ -0.91
ATL3-204ENST00000540699 ENPP1P22413 925 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 DCKP27707 260 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 GTF2E2P29084 291 aaKnown RBP9.39□□□□□ -0.91
ATL3-204ENST00000540699 OPRM1P35372 400 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 SLC16A1P53985 500 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 OR2B6P58173 313 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 RPL27P61353 136 aaKnown RBP9.39□□□□□ -0.91
ATL3-204ENST00000540699 SLC35A1P78382 337 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 DBPQ10586 325 aaPredicted RBP9.39□□□□□ -0.91
ATL3-204ENST00000540699 FOXF2Q12947 444 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 DOC2BQ14184 412 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 GGTLC2Q14390 218 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 RNPS1Q15287 305 aaKnown RBP9.39□□□□□ -0.91
ATL3-204ENST00000540699 CDSNQ15517 529 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 ACKR1Q16570 336 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 SLC25A35Q3KQZ1 300 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 LEG1Q6P5S2 330 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 PAQR6Q6TCH4 344 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 FCRLAQ7L513 359 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 P4HA3Q7Z4N8 544 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 GPR141Q7Z602 305 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 PXKQ7Z7A4 578 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 ARIH2OSQ8N7S6 290 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 TMEM99Q8N816 258 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 RELL2Q8NC24 303 aaPredicted RBP9.39□□□□□ -0.91
ATL3-204ENST00000540699 FCGR1BQ92637 280 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 MARVELD3Q96A59 401 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 GMPPAQ96IJ6 420 aaPredicted RBP9.39□□□□□ -0.91
ATL3-204ENST00000540699 NMNAT3Q96T66 252 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 TEAD3Q99594 435 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 ZNF649Q9BS31 505 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 TAS2R16Q9NYV7 291 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 JKAMPQ9P055 326 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 GRHPRQ9UBQ7 328 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 ING1Q9UK53 422 aaPredicted RBP9.39□□□□□ -0.91
ATL3-204ENST00000540699 CEPT1Q9Y6K0 416 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 COMMD3-BMI1R4GMX3 469 aa9.39□□□□□ -0.91
ATL3-204ENST00000540699 IGKV3D-15A0A087WSY6 115 aa9.38□□□□□ -0.91
ATL3-204ENST00000540699 LOC102725191A0A1B0GVB3 256 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms