RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 OR5P2Q8WZ92 322 aa10.16□□□□□ -0.78
PBX1-212ENST00000540236 UBE2E3Q969T4 207 aa10.16□□□□□ -0.78
PBX1-212ENST00000540236 NUDT9Q9BW91 350 aa10.16□□□□□ -0.78
PBX1-212ENST00000540236 SMG9Q9H0W8 520 aaKnown RBP10.16□□□□□ -0.78
PBX1-212ENST00000540236 LHX9Q9NQ69 397 aa10.16□□□□□ -0.78
PBX1-212ENST00000540236 NUP205Q92621 2012 aa10.16□□□□□ -0.78
PBX1-212ENST00000540236 GNB3P16520 340 aa10.16□□□□□ -0.78
PBX1-212ENST00000540236 KLK2P20151 261 aa10.16□□□□□ -0.78
PBX1-212ENST00000540236 FCGR2CP31995 323 aa10.16□□□□□ -0.78
PBX1-212ENST00000540236 COX15Q7KZN9 410 aa10.16□□□□□ -0.78
PBX1-212ENST00000540236 LILRA3Q8N6C8 439 aaPredicted RBP10.16□□□□□ -0.78
PBX1-212ENST00000540236 FAM71CQ8NEG0 241 aa10.16□□□□□ -0.78
PBX1-212ENST00000540236 RAB39BQ96DA2 213 aa10.16□□□□□ -0.78
PBX1-212ENST00000540236 FUBP3Q96I24 572 aaKnown RBP eCLIP10.16□□□□□ -0.78
PBX1-212ENST00000540236 NRIP2Q9BQI9 281 aa10.16□□□□□ -0.78
PBX1-212ENST00000540236 WFDC6Q9BQY6 131 aa10.16□□□□□ -0.78
PBX1-212ENST00000540236 PRSS47A8MTI9 375 aa10.16□□□□□ -0.78
PBX1-212ENST00000540236 CRTAPO75718 401 aaPredicted RBP10.16□□□□□ -0.78
PBX1-212ENST00000540236 FOLR1P15328 257 aa10.16□□□□□ -0.78
PBX1-212ENST00000540236 CD52P31358 61 aa10.16□□□□□ -0.78
PBX1-212ENST00000540236 APLNRP35414 380 aa10.16□□□□□ -0.78
PBX1-212ENST00000540236 GZMMP51124 257 aa10.16□□□□□ -0.78
PBX1-212ENST00000540236 KRTDAPP60985 99 aa10.16□□□□□ -0.78
PBX1-212ENST00000540236 CSNK2A1P68400 391 aaPredicted RBP10.16□□□□□ -0.78
PBX1-212ENST00000540236 IKZF1Q13422 519 aa10.16□□□□□ -0.78
PBX1-212ENST00000540236 AGERQ15109 404 aa10.16□□□□□ -0.78
PBX1-212ENST00000540236 SLC35D2Q76EJ3 337 aa10.16□□□□□ -0.78
PBX1-212ENST00000540236 ZNF429Q86V71 674 aa10.16□□□□□ -0.78
PBX1-212ENST00000540236 ZNF321PQ8N8H1 164 aa10.16□□□□□ -0.78
PBX1-212ENST00000540236 CSNK2A3Q8NEV1 391 aa10.16□□□□□ -0.78
PBX1-212ENST00000540236 OR10G6Q8NH81 332 aa10.16□□□□□ -0.78
PBX1-212ENST00000540236 TRIB3Q96RU7 358 aa10.16□□□□□ -0.78
PBX1-212ENST00000540236 SIRT3Q9NTG7 399 aaPredicted RBP10.16□□□□□ -0.78
PBX1-212ENST00000540236 SPG21Q9NZD8 308 aa10.16□□□□□ -0.78
PBX1-212ENST00000540236 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.15□□□□□ -0.78
PBX1-212ENST00000540236 OR5H15A6NDH6 313 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 ZNF860A6NHJ4 632 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 OR5H1A6NKK0 313 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 MARCH11A6NNE9 402 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 KDELR3O43731 214 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 C5AR1P21730 350 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 UCP3P55916 312 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 IL34Q6ZMJ4 242 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 ST6GALNAC3Q8NDV1 305 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 OR5H2Q8NGV7 314 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 OR8U1Q8NH10 309 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 TMEM174Q8WUU8 243 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 NMNAT3Q96T66 252 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 METTL9Q9H1A3 318 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 C19orf12Q9NSK7 152 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 METTL1Q9UBP6 276 aaKnown RBP10.15□□□□□ -0.78
PBX1-212ENST00000540236 GRHPRQ9UBQ7 328 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 STEAP1Q9UHE8 339 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 ZNF281Q9Y2X9 895 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 LRP5O75197 1615 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 MIA3Q5JRA6 1907 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 LOXHD1Q8IVV2 1947 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 SEC14L6B5MCN3 397 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 VEGFDO43915 354 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 GALTP07902 379 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 OR8U8P0C7N1 319 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 CD1CP29017 333 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 PPP1R1AQ13522 171 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 PPA1Q15181 289 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 TCTN3Q6NUS6 607 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 ADAD2Q8NCV1 583 aaKnown RBP10.15□□□□□ -0.78
PBX1-212ENST00000540236 SUN3Q8TAQ9 357 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 DYRK2Q92630 601 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 TNFRSF13CQ96RJ3 184 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 GNG13Q9P2W3 67 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 UBE2CO00762 179 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 ZNF623O75123 536 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 IGHV2-70P01814 119 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 CHRM4P08173 479 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 ZNF16P17020 682 aaPredicted RBP10.15□□□□□ -0.78
PBX1-212ENST00000540236 CRABP1P29762 137 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 TRA2AQ13595 282 aaKnown RBP eCLIP10.15□□□□□ -0.78
PBX1-212ENST00000540236 FAM181AQ8N9Y4 354 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 ZNF346Q9UL40 294 aaKnown RBP10.15□□□□□ -0.78
PBX1-212ENST00000540236 OR52A4PA6NMU1 304 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 MAN2B1O00754 1011 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 XRCC2O43543 280 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 DVL1P1P54792 670 aaPredicted RBP10.15□□□□□ -0.78
PBX1-212ENST00000540236 FOXK2Q01167 660 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 KIAA0040Q15053 153 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 KHDC3LQ587J8 217 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 RARRES2Q99969 163 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 NIPSNAP3BQ9BS92 247 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 LAMP3Q9UQV4 416 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 PIAS3Q9Y6X2 628 aa10.15□□□□□ -0.78
PBX1-212ENST00000540236 RAB29O14966 203 aa10.15□□□□□ -0.79
PBX1-212ENST00000540236 RBMXL2O75526 392 aaKnown RBP10.15□□□□□ -0.79
PBX1-212ENST00000540236 WNT3P56703 355 aa10.15□□□□□ -0.79
PBX1-212ENST00000540236 ZNF280AP59817 542 aaPredicted RBP10.15□□□□□ -0.79
PBX1-212ENST00000540236 TMCO2Q7Z6W1 182 aaPredicted RBP10.15□□□□□ -0.79
PBX1-212ENST00000540236 MARCH1Q8TCQ1 289 aa10.15□□□□□ -0.79
PBX1-212ENST00000540236 RLN3Q8WXF3 142 aa10.15□□□□□ -0.79
PBX1-212ENST00000540236 MARS2Q96GW9 593 aaKnown RBP10.15□□□□□ -0.79
PBX1-212ENST00000540236 TMEM169Q96HH4 297 aa10.15□□□□□ -0.79
PBX1-212ENST00000540236 AQP7P3A6NL99 342 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms