RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 TRIM23P36406 574 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 ARR3P36575 388 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 RPL34P49207 117 aaKnown RBP5.96□□□□□ -1.46
LSAMP-207ENST00000539563 MEP1BQ16820 701 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 LTC4SQ16873 150 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 LINC00696Q6ZRV3 163 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 DOK3Q7L591 496 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 FUNDC1Q8IVP5 155 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 MAML2Q8IZL2 1156 aaPredicted RBP5.96□□□□□ -1.46
LSAMP-207ENST00000539563 KDM8Q8N371 416 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 NANOGP1Q8N7R0 232 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 MZB1Q8WU39 189 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 KCNE4Q8WWG9 221 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 MS4A6EQ96DS6 147 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 NIPSNAP1Q9BPW8 284 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 EGLN1Q9GZT9 426 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 SLC39A9Q9NUM3 307 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 GMPR2Q9P2T1 348 aaKnown RBP5.96□□□□□ -1.46
LSAMP-207ENST00000539563 SH3BGRL2Q9UJC5 107 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 USP22Q9UPT9 525 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 AGPAT2O15120 278 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 PMP2P02689 132 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 TEAD1P28347 426 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 MAP2K6P52564 334 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 TEKQ02763 1124 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 PAN3Q58A45 887 aaKnown RBP5.96□□□□□ -1.46
LSAMP-207ENST00000539563 MAVSQ7Z434 540 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 SEMA6DQ8NFY4 1073 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 PFN4Q8NHR9 129 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 LINC00615Q96LM1 132 aaPredicted RBP5.96□□□□□ -1.46
LSAMP-207ENST00000539563 RANGRFQ9HD47 186 aaPredicted RBP5.96□□□□□ -1.46
LSAMP-207ENST00000539563 PIGLQ9Y2B2 252 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 ATG2BQ96BY7 2078 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 LCMT2O60294 686 aaKnown RBP5.96□□□□□ -1.46
LSAMP-207ENST00000539563 GSTP1P09211 210 aaKnown RBP5.96□□□□□ -1.46
LSAMP-207ENST00000539563 MRPL58Q14197 206 aaKnown RBP5.96□□□□□ -1.46
LSAMP-207ENST00000539563 SLC10A1Q14973 349 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 TRIM61Q5EBN2 209 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 FCRL6Q6DN72 434 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 CAMKMTQ7Z624 323 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 CPNE4Q96A23 557 aaPredicted RBP5.96□□□□□ -1.46
LSAMP-207ENST00000539563 FAM3DQ96BQ1 224 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 MKRN2Q9H000 416 aaKnown RBP5.96□□□□□ -1.46
LSAMP-207ENST00000539563 C20orf85Q9H1P6 137 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 OR52A5Q9H2C5 316 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 UBQLN3Q9H347 655 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 METTL17Q9H7H0 456 aaPredicted RBP5.96□□□□□ -1.46
LSAMP-207ENST00000539563 FKRPQ9H9S5 495 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 EXOSC3Q9NQT5 275 aaKnown RBP5.96□□□□□ -1.46
LSAMP-207ENST00000539563 GNG12Q9UBI6 72 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 CHRNA9Q9UGM1 479 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 CXorf51AA0A1B0GTR3 108 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 DOK2O60496 412 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 NSA2O95478 260 aaKnown RBP5.96□□□□□ -1.46
LSAMP-207ENST00000539563 SOD1P00441 154 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 IGLV3-25P01717 112 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 ACHEP22303 614 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 LCN6P62502 163 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 SORDQ00796 357 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 DOC2BQ14184 412 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 OPCMLQ14982 345 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 TMEM240Q5SV17 173 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 LHFPL2Q6ZUX7 228 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 RTN4RL1Q86UN2 441 aaPredicted RBP5.96□□□□□ -1.46
LSAMP-207ENST00000539563 RETREG3Q86VR2 466 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 CISD2Q8N5K1 135 aaKnown RBP5.96□□□□□ -1.46
LSAMP-207ENST00000539563 C1QTNF3Q9BXJ4 246 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 LAT2Q9GZY6 243 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 DAPP1Q9UN19 280 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 GPR55Q9Y2T6 319 aaPredicted RBP5.96□□□□□ -1.46
LSAMP-207ENST00000539563 KRBOX1C9JBD0 128 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 CTDSP2O14595 271 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 VAMP5O95183 116 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 CT45A6P0DMU7 189 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 CT45A5P0DMU8 189 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 CT45A7P0DMV0 189 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 CT45A8P0DMV1 189 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 CT45A9P0DMV2 189 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 SNCAP37840 140 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 ADPRMQ3LIE5 342 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 CT45A2Q5DJT8 189 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 CT45A1Q5HYN5 189 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 GLYATL3Q5SZD4 288 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 HEPHL1Q6MZM0 1159 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 PARM1Q6UWI2 310 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 TMEM207Q6UWW9 146 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 CATSPERDQ86XM0 798 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 CT45A3Q8NHU0 189 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 RNF141Q8WVD5 230 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 ATOH1Q92858 354 aaPredicted RBP5.96□□□□□ -1.46
LSAMP-207ENST00000539563 PLEKHF2Q9H8W4 249 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 NDRG4Q9ULP0 352 aaKnown RBP5.96□□□□□ -1.46
LSAMP-207ENST00000539563 COPS3Q9UNS2 423 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 MED16Q9Y2X0 877 aa5.96□□□□□ -1.46
LSAMP-207ENST00000539563 SDHAP31040 664 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 CASP3P42574 277 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 BAXQ07812 192 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 OR8G1Q15617 311 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 ZMAT1Q5H9K5 638 aa5.95□□□□□ -1.46
LSAMP-207ENST00000539563 UBALD2Q8IYN6 164 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms