RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 PSMB1P20618 241 aaKnown RBP11.41□□□□□ -0.58
CCDC42-202ENST00000539522 SLC6A6P31641 620 aa11.41□□□□□ -0.58
CCDC42-202ENST00000539522 EFNB1P98172 346 aa11.41□□□□□ -0.58
CCDC42-202ENST00000539522 GABRA6Q16445 453 aa11.41□□□□□ -0.58
CCDC42-202ENST00000539522 KCTD21Q4G0X4 260 aa11.41□□□□□ -0.58
CCDC42-202ENST00000539522 CLEC12AQ5QGZ9 265 aa11.41□□□□□ -0.58
CCDC42-202ENST00000539522 SLC25A30Q5SVS4 291 aa11.41□□□□□ -0.58
CCDC42-202ENST00000539522 DPY19L2P2Q6ZN68 376 aa11.41□□□□□ -0.58
CCDC42-202ENST00000539522 BEND4Q6ZU67 534 aa11.41□□□□□ -0.58
CCDC42-202ENST00000539522 ENTHD1Q8IYW4 607 aa11.41□□□□□ -0.58
CCDC42-202ENST00000539522 IQCF1Q8N6M8 205 aa11.41□□□□□ -0.58
CCDC42-202ENST00000539522 ARIH2OSQ8N7S6 290 aa11.41□□□□□ -0.58
CCDC42-202ENST00000539522 SYT14Q8NB59 555 aa11.41□□□□□ -0.58
CCDC42-202ENST00000539522 OR2T33Q8NG76 320 aa11.41□□□□□ -0.58
CCDC42-202ENST00000539522 OR8J1Q8NGP2 316 aa11.41□□□□□ -0.58
CCDC42-202ENST00000539522 ZNRF4Q8WWF5 429 aa11.41□□□□□ -0.58
CCDC42-202ENST00000539522 HTRA1Q92743 480 aa11.41□□□□□ -0.58
CCDC42-202ENST00000539522 UBE2FQ969M7 185 aa11.41□□□□□ -0.58
CCDC42-202ENST00000539522 LRR1Q96L50 414 aa11.41□□□□□ -0.58
CCDC42-202ENST00000539522 ADAD1Q96M93 576 aaKnown RBP11.41□□□□□ -0.58
CCDC42-202ENST00000539522 POLDIP3Q9BY77 421 aaKnown RBP11.41□□□□□ -0.58
CCDC42-202ENST00000539522 NDEL1Q9GZM8 345 aa11.41□□□□□ -0.58
CCDC42-202ENST00000539522 RASSF1Q9NS23 344 aa11.41□□□□□ -0.58
CCDC42-202ENST00000539522 TBC1D23Q9NUY8 699 aa11.41□□□□□ -0.58
CCDC42-202ENST00000539522 PARPBPQ9NWS1 579 aa11.41□□□□□ -0.58
CCDC42-202ENST00000539522 CLN6Q9NWW5 311 aa11.41□□□□□ -0.58
CCDC42-202ENST00000539522 SCN3BQ9NY72 215 aa11.41□□□□□ -0.58
CCDC42-202ENST00000539522 ELOVL5Q9NYP7 299 aa11.41□□□□□ -0.58
CCDC42-202ENST00000539522 ZNF226Q9NYT6 803 aa11.41□□□□□ -0.58
CCDC42-202ENST00000539522 TVP23BQ9NYZ1 205 aa11.41□□□□□ -0.58
CCDC42-202ENST00000539522 SCOCQ9UIL1 159 aa11.41□□□□□ -0.58
CCDC42-202ENST00000539522 BLOC1S6Q9UL45 172 aa11.41□□□□□ -0.58
CCDC42-202ENST00000539522 A0A1W2PRG6 482 aa11.4□□□□□ -0.58
CCDC42-202ENST00000539522 SH3D21A4FU49 640 aa11.4□□□□□ -0.58
CCDC42-202ENST00000539522 PRSS44E7EML9 344 aa11.4□□□□□ -0.58
CCDC42-202ENST00000539522 DCTN6O00399 190 aa11.4□□□□□ -0.58
CCDC42-202ENST00000539522 ARPC3O15145 178 aa11.4□□□□□ -0.58
CCDC42-202ENST00000539522 SIAH2O43255 324 aa11.4□□□□□ -0.58
CCDC42-202ENST00000539522 IDH3BO43837 385 aa11.4□□□□□ -0.58
CCDC42-202ENST00000539522 SLC43A1O75387 559 aa11.4□□□□□ -0.58
CCDC42-202ENST00000539522 SLC2A10O95528 541 aa11.4□□□□□ -0.58
CCDC42-202ENST00000539522 SCG5P05408 212 aa11.4□□□□□ -0.58
CCDC42-202ENST00000539522 CCDC159P0C7I6 412 aa11.4□□□□□ -0.58
CCDC42-202ENST00000539522 HIST1H1CP16403 213 aaKnown RBP11.4□□□□□ -0.58
CCDC42-202ENST00000539522 GABRB1P18505 474 aa11.4□□□□□ -0.58
CCDC42-202ENST00000539522 SDHAP31040 664 aa11.4□□□□□ -0.58
CCDC42-202ENST00000539522 GRK5P34947 590 aa11.4□□□□□ -0.58
CCDC42-202ENST00000539522 ACVR1BP36896 505 aa11.4□□□□□ -0.58
CCDC42-202ENST00000539522 ROR2Q01974 943 aaKnown RBP11.4□□□□□ -0.58
CCDC42-202ENST00000539522 ETFDHQ16134 617 aa11.4□□□□□ -0.58
CCDC42-202ENST00000539522 SNAPC1Q16533 368 aa11.4□□□□□ -0.58
CCDC42-202ENST00000539522 SLC25A47Q6Q0C1 308 aa11.4□□□□□ -0.58
CCDC42-202ENST00000539522 DMRTC2Q8IXT2 367 aaPredicted RBP11.4□□□□□ -0.58
CCDC42-202ENST00000539522 LNX2Q8N448 690 aa11.4□□□□□ -0.58
CCDC42-202ENST00000539522 WDR31Q8NA23 367 aa11.4□□□□□ -0.58
CCDC42-202ENST00000539522 POMGNT2Q8NAT1 580 aa11.4□□□□□ -0.58
CCDC42-202ENST00000539522 NOXO1Q8NFA2 376 aa11.4□□□□□ -0.58
CCDC42-202ENST00000539522 LINC01560Q8TB33 94 aa11.4□□□□□ -0.58
CCDC42-202ENST00000539522 MCHR2Q969V1 340 aa11.4□□□□□ -0.58
CCDC42-202ENST00000539522 BOD1Q96IK1 185 aa11.4□□□□□ -0.58
CCDC42-202ENST00000539522 WFIKKN1Q96NZ8 548 aa11.4□□□□□ -0.58
CCDC42-202ENST00000539522 CRLF2Q9HC73 371 aa11.4□□□□□ -0.58
CCDC42-202ENST00000539522 ASH1LQ9NR48 2969 aaKnown RBP11.4□□□□□ -0.58
CCDC42-202ENST00000539522 PLCXD1Q9NUJ7 323 aa11.4□□□□□ -0.58
CCDC42-202ENST00000539522 ASB6Q9NWX5 421 aa11.4□□□□□ -0.58
CCDC42-202ENST00000539522 GLTPQ9NZD2 209 aa11.4□□□□□ -0.58
CCDC42-202ENST00000539522 ZNF224Q9NZL3 707 aa11.4□□□□□ -0.58
CCDC42-202ENST00000539522 TPRKBQ9Y3C4 175 aa11.4□□□□□ -0.58
CCDC42-202ENST00000539522 HECTD1Q9ULT8 2610 aa11.39□□□□□ -0.59
CCDC42-202ENST00000539522 SLC22A23A1A5C7 686 aa11.39□□□□□ -0.59
CCDC42-202ENST00000539522 TRIM64A6NGJ6 449 aa11.39□□□□□ -0.59
CCDC42-202ENST00000539522 TLX2O43763 284 aaPredicted RBP11.39□□□□□ -0.59
CCDC42-202ENST00000539522 WBP4O75554 376 aaKnown RBP11.39□□□□□ -0.59
CCDC42-202ENST00000539522 SEC14L2O76054 403 aa11.39□□□□□ -0.59
CCDC42-202ENST00000539522 APEHP13798 732 aaKnown RBP11.39□□□□□ -0.59
CCDC42-202ENST00000539522 CRHBPP24387 322 aa11.39□□□□□ -0.59
CCDC42-202ENST00000539522 MPGP29372 298 aa11.39□□□□□ -0.59
CCDC42-202ENST00000539522 RPL4P36578 427 aaKnown RBP11.39□□□□□ -0.59
CCDC42-202ENST00000539522 DAP3P51398 398 aaKnown RBP11.39□□□□□ -0.59
CCDC42-202ENST00000539522 SORDQ00796 357 aa11.39□□□□□ -0.59
CCDC42-202ENST00000539522 ITGADQ13349 1161 aa11.39□□□□□ -0.59
CCDC42-202ENST00000539522 KRR1Q13601 381 aaKnown RBP11.39□□□□□ -0.59
CCDC42-202ENST00000539522 P2RY6Q15077 328 aa11.39□□□□□ -0.59
CCDC42-202ENST00000539522 OCLNQ16625 522 aa11.39□□□□□ -0.59
CCDC42-202ENST00000539522 CEACAM16Q2WEN9 425 aa11.39□□□□□ -0.59
CCDC42-202ENST00000539522 PGGHGQ32M88 737 aa11.39□□□□□ -0.59
CCDC42-202ENST00000539522 MEDAGQ5VYS4 303 aa11.39□□□□□ -0.59
CCDC42-202ENST00000539522 LAIR2Q6ISS4 152 aa11.39□□□□□ -0.59
CCDC42-202ENST00000539522 TMEM154Q6P9G4 183 aa11.39□□□□□ -0.59
CCDC42-202ENST00000539522 UBE2J2Q8N2K1 259 aa11.39□□□□□ -0.59
CCDC42-202ENST00000539522 TCEANCQ8N8B7 351 aa11.39□□□□□ -0.59
CCDC42-202ENST00000539522 NPEPL1Q8NDH3 523 aa11.39□□□□□ -0.59
CCDC42-202ENST00000539522 BPIFB6Q8NFQ5 453 aa11.39□□□□□ -0.59
CCDC42-202ENST00000539522 TSPAN14Q8NG11 270 aa11.39□□□□□ -0.59
CCDC42-202ENST00000539522 OR1K1Q8NGR3 316 aa11.39□□□□□ -0.59
CCDC42-202ENST00000539522 CNIH3Q8TBE1 160 aa11.39□□□□□ -0.59
CCDC42-202ENST00000539522 BCL2L2Q92843 193 aaPredicted RBP11.39□□□□□ -0.59
CCDC42-202ENST00000539522 ZNF566Q969W8 418 aa11.39□□□□□ -0.59
CCDC42-202ENST00000539522 S100PBPQ96BU1 408 aa11.39□□□□□ -0.59
CCDC42-202ENST00000539522 PLEKHA8Q96JA3 519 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms