RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 TNNT2P45379 298 aaPredicted RBP4.17□□□□□ -1.74
TRAV11-201ENST00000539512 ZNF136P52737 540 aa4.17□□□□□ -1.74
TRAV11-201ENST00000539512 ACLYP53396 1101 aa4.17□□□□□ -1.74
TRAV11-201ENST00000539512 ACTA2P62736 377 aa4.17□□□□□ -1.74
TRAV11-201ENST00000539512 ACTG2P63267 376 aa4.17□□□□□ -1.74
TRAV11-201ENST00000539512 ACTC1P68032 377 aa4.17□□□□□ -1.74
TRAV11-201ENST00000539512 GINS1Q14691 196 aa4.17□□□□□ -1.74
TRAV11-201ENST00000539512 UBE2SQ16763 222 aa4.17□□□□□ -1.74
TRAV11-201ENST00000539512 CCNJQ5T5M9 372 aa4.17□□□□□ -1.74
TRAV11-201ENST00000539512 HES5Q5TA89 166 aa4.17□□□□□ -1.74
TRAV11-201ENST00000539512 ZFP2Q6ZN57 461 aa4.17□□□□□ -1.74
TRAV11-201ENST00000539512 ZNF493Q6ZR52 646 aa4.17□□□□□ -1.74
TRAV11-201ENST00000539512 CDR2LQ86X02 465 aaPredicted RBP4.17□□□□□ -1.74
TRAV11-201ENST00000539512 FAM3DQ96BQ1 224 aa4.17□□□□□ -1.74
TRAV11-201ENST00000539512 RASD2Q96D21 266 aa4.17□□□□□ -1.74
TRAV11-201ENST00000539512 TSNARE1Q96NA8 513 aa4.17□□□□□ -1.74
TRAV11-201ENST00000539512 LINC00597Q9H2U6 94 aa4.17□□□□□ -1.74
TRAV11-201ENST00000539512 LHX9Q9NQ69 397 aa4.17□□□□□ -1.74
TRAV11-201ENST00000539512 ZNF629Q9UEG4 869 aaPredicted RBP4.17□□□□□ -1.74
TRAV11-201ENST00000539512 F11RQ9Y624 299 aaKnown RBP4.17□□□□□ -1.74
TRAV11-201ENST00000539512 BAZ1AQ9NRL2 1556 aaPredicted RBP4.16□□□□□ -1.74
TRAV11-201ENST00000539512 PLAC8L1A1L4L8 177 aa4.16□□□□□ -1.74
TRAV11-201ENST00000539512 XKRY2A2RUG3 117 aa4.16□□□□□ -1.74
TRAV11-201ENST00000539512 LRRIQ3A6PVS8 624 aaPredicted RBP4.16□□□□□ -1.74
TRAV11-201ENST00000539512 AIM2O14862 343 aa4.16□□□□□ -1.74
TRAV11-201ENST00000539512 IGLV2-23P01705 113 aa4.16□□□□□ -1.74
TRAV11-201ENST00000539512 FABP3P05413 133 aa4.16□□□□□ -1.74
TRAV11-201ENST00000539512 MAGP20916 626 aa4.16□□□□□ -1.74
TRAV11-201ENST00000539512 OMGP23515 440 aa4.16□□□□□ -1.74
TRAV11-201ENST00000539512 PBLDP30039 288 aaPredicted RBP4.16□□□□□ -1.74
TRAV11-201ENST00000539512 SSR4P51571 173 aa4.16□□□□□ -1.74
TRAV11-201ENST00000539512 NUTF2P61970 127 aaKnown RBP4.16□□□□□ -1.74
TRAV11-201ENST00000539512 MADCAM1Q13477 382 aa4.16□□□□□ -1.74
TRAV11-201ENST00000539512 DEFB116Q30KQ4 102 aa4.16□□□□□ -1.74
TRAV11-201ENST00000539512 LYPD2Q6UXB3 125 aa4.16□□□□□ -1.74
TRAV11-201ENST00000539512 CDH26Q8IXH8 852 aa4.16□□□□□ -1.74
TRAV11-201ENST00000539512 SAXO1Q8IYX7 474 aa4.16□□□□□ -1.74
TRAV11-201ENST00000539512 ZFP90Q8TF47 636 aa4.16□□□□□ -1.74
TRAV11-201ENST00000539512 PISDQ9UG56 409 aa4.16□□□□□ -1.74
TRAV11-201ENST00000539512 CTNNA3Q9UI47 895 aa4.16□□□□□ -1.74
TRAV11-201ENST00000539512 CEMIPQ8WUJ3 1361 aa4.15□□□□□ -1.74
TRAV11-201ENST00000539512 INS-IGF2F8WCM5 200 aa4.15□□□□□ -1.75
TRAV11-201ENST00000539512 RAB3DO95716 219 aa4.15□□□□□ -1.75
TRAV11-201ENST00000539512 CLIC3O95833 236 aa4.15□□□□□ -1.75
TRAV11-201ENST00000539512 EIF2S2P20042 333 aaKnown RBP4.15□□□□□ -1.75
TRAV11-201ENST00000539512 CDKN1BP46527 198 aa4.15□□□□□ -1.75
TRAV11-201ENST00000539512 CCNHP51946 323 aaPredicted RBP4.15□□□□□ -1.75
TRAV11-201ENST00000539512 EBI3Q14213 229 aa4.15□□□□□ -1.75
TRAV11-201ENST00000539512 CCDC183Q5T5S1 534 aa4.15□□□□□ -1.75
TRAV11-201ENST00000539512 ANKRD26P1Q6NSI1 321 aa4.15□□□□□ -1.75
TRAV11-201ENST00000539512 ZNF836Q6ZNA1 936 aa4.15□□□□□ -1.75
TRAV11-201ENST00000539512 MS4A15Q8N5U1 240 aa4.15□□□□□ -1.75
TRAV11-201ENST00000539512 OR10G4Q8NGN3 311 aa4.15□□□□□ -1.75
TRAV11-201ENST00000539512 OR2L8Q8NGY9 312 aa4.15□□□□□ -1.75
TRAV11-201ENST00000539512 SLC7A13Q8TCU3 470 aa4.15□□□□□ -1.75
TRAV11-201ENST00000539512 ATP5SQ99766 215 aa4.15□□□□□ -1.75
TRAV11-201ENST00000539512 MRPL37Q9BZE1 423 aaKnown RBP4.15□□□□□ -1.75
TRAV11-201ENST00000539512 NOX3Q9HBY0 568 aa4.15□□□□□ -1.75
TRAV11-201ENST00000539512 INPP5EQ9NRR6 644 aa4.15□□□□□ -1.75
TRAV11-201ENST00000539512 ING4Q9UNL4 249 aa4.15□□□□□ -1.75
TRAV11-201ENST00000539512 RRP15Q9Y3B9 282 aaKnown RBP4.15□□□□□ -1.75
TRAV11-201ENST00000539512 CSDC2Q9Y534 153 aaKnown RBP4.15□□□□□ -1.75
TRAV11-201ENST00000539512 IGKV2-28A0A075B6P5 120 aa4.14□□□□□ -1.75
TRAV11-201ENST00000539512 GOLGA8OA6NCC3 632 aa4.14□□□□□ -1.75
TRAV11-201ENST00000539512 CCDC169A6NNP5 214 aa4.14□□□□□ -1.75
TRAV11-201ENST00000539512 RSPH10B2B2RC85 870 aa4.14□□□□□ -1.75
TRAV11-201ENST00000539512 GOLGA8NF8WBI6 632 aa4.14□□□□□ -1.75
TRAV11-201ENST00000539512 LSM1O15116 133 aaKnown RBP4.14□□□□□ -1.75
TRAV11-201ENST00000539512 SLC25A14O95258 325 aaPredicted RBP4.14□□□□□ -1.75
TRAV11-201ENST00000539512 C6orf47O95873 294 aa4.14□□□□□ -1.75
TRAV11-201ENST00000539512 IGKV2D-28P01615 120 aa4.14□□□□□ -1.75
TRAV11-201ENST00000539512 IGHDP01880 384 aa4.14□□□□□ -1.75
TRAV11-201ENST00000539512 RSPH10BP0C881 870 aa4.14□□□□□ -1.75
TRAV11-201ENST00000539512 FOXN2P32314 431 aa4.14□□□□□ -1.75
TRAV11-201ENST00000539512 LRRC74AQ0VAA2 488 aa4.14□□□□□ -1.75
TRAV11-201ENST00000539512 ERCC8Q13216 396 aa4.14□□□□□ -1.75
TRAV11-201ENST00000539512 RSPO1Q2MKA7 263 aaPredicted RBP4.14□□□□□ -1.75
TRAV11-201ENST00000539512 NIPA1Q7RTP0 329 aa4.14□□□□□ -1.75
TRAV11-201ENST00000539512 ASCL5Q7RTU5 278 aa4.14□□□□□ -1.75
TRAV11-201ENST00000539512 C12orf56Q8IXR9 622 aa4.14□□□□□ -1.75
TRAV11-201ENST00000539512 CYB561D1Q8N8Q1 229 aa4.14□□□□□ -1.75
TRAV11-201ENST00000539512 Q8N976 141 aa4.14□□□□□ -1.75
TRAV11-201ENST00000539512 OR1S2Q8NGQ3 325 aa4.14□□□□□ -1.75
TRAV11-201ENST00000539512 OR10R2Q8NGX6 335 aa4.14□□□□□ -1.75
TRAV11-201ENST00000539512 OR4S2Q8NH73 311 aa4.14□□□□□ -1.75
TRAV11-201ENST00000539512 LKAAEAR1Q8TD35 194 aa4.14□□□□□ -1.75
TRAV11-201ENST00000539512 CNDP1Q96KN2 507 aa4.14□□□□□ -1.75
TRAV11-201ENST00000539512 NUP58Q9BVL2 599 aa4.14□□□□□ -1.75
TRAV11-201ENST00000539512 CYTL1Q9NRR1 136 aa4.14□□□□□ -1.75
TRAV11-201ENST00000539512 LSM7Q9UK45 103 aaKnown RBP4.14□□□□□ -1.75
TRAV11-201ENST00000539512 THOC2Q8NI27 1593 aaKnown RBP4.14□□□□□ -1.75
TRAV11-201ENST00000539512 CNTNAP1P78357 1384 aa4.14□□□□□ -1.75
TRAV11-201ENST00000539512 CARMIL3Q8ND23 1372 aa4.14□□□□□ -1.75
TRAV11-201ENST00000539512 A0A1W2PP18 115 aa4.13□□□□□ -1.75
TRAV11-201ENST00000539512 AIREO43918 545 aa4.13□□□□□ -1.75
TRAV11-201ENST00000539512 GABARAPO95166 117 aa4.13□□□□□ -1.75
TRAV11-201ENST00000539512 AIFM1O95831 613 aa4.13□□□□□ -1.75
TRAV11-201ENST00000539512 PRPS2P11908 318 aa4.13□□□□□ -1.75
TRAV11-201ENST00000539512 HRH1P35367 487 aa4.13□□□□□ -1.75
TRAV11-201ENST00000539512 SLAQ13239 276 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms