RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 PPP3CBP16298 524 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 AQP2P41181 271 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 EGR4Q05215 589 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 ZNF169Q14929 603 aaPredicted RBP11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 NKPD1Q17RQ9 610 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 SCGB2B2Q4G0G5 96 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 KIAA0895LQ68EN5 471 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 OR10K2Q6IF99 312 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 TFAP2EQ6VUC0 442 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 C2CD4CQ8TF44 421 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 SCARB1Q8WTV0 552 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 ZNF416Q9BWM5 594 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 ANKRD20A5PA0PJZ0 165 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 F5H5P2 479 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 GPR31O00270 319 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 PRAMEF2O60811 474 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 SERPINA3P01011 423 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 LUMP51884 338 aaPredicted RBP11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 RAP2BP61225 183 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 ZNF684Q5T5D7 378 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 FNDC7Q5VTL7 733 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 ARMC6Q6NXE6 501 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 LEG1Q6P5S2 330 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 UNQ9370/PRO34162Q6UXP9 181 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 UNQ6126/PRO20091Q6UXV3 157 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 STAC2Q6ZMT1 411 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 DEFB119Q8N690 84 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 POMGNT2Q8NAT1 580 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 BPIFCQ8NFQ6 507 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 FAM174AQ8TBP5 190 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 ATOH1Q92858 354 aaPredicted RBP11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 MMABQ96EY8 250 aaPredicted RBP11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 ADAD1Q96M93 576 aaKnown RBP11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 GPN1Q9HCN4 374 aaPredicted RBP11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 PCDHB16Q9NRJ7 776 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 EFCAB7A8K855 629 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 A8MXK9 166 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 DNASE2O00115 360 aaPredicted RBP11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 AIPO00170 330 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 GIPP09681 153 aaPredicted RBP11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 FOSL1P15407 271 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 GPR143P51810 404 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 EFNA3P52797 238 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 GFERP55789 205 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 MC2RQ01718 297 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 FAM69AQ5T7M9 428 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 RPL22L1Q6P5R6 122 aaKnown RBP11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 MED25Q71SY5 747 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 FAM122BQ7Z309 247 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 CMIPQ8IY22 773 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 ZNF595Q8IYB9 648 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 OR6V1Q8N148 313 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 TMEM185AQ8NFB2 350 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 TMEM131Q92545 1883 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 HPF1Q9NWY4 346 aa11.38□□□□□ -0.59
SFSWAP-208ENST00000539506 D6RAR5 112 aa11.37□□□□□ -0.59
SFSWAP-208ENST00000539506 LINC01387J3KSC0 135 aa11.37□□□□□ -0.59
SFSWAP-208ENST00000539506 ARPC3O15145 178 aa11.37□□□□□ -0.59
SFSWAP-208ENST00000539506 RBBP9O75884 186 aa11.37□□□□□ -0.59
SFSWAP-208ENST00000539506 ANXA2P07355 339 aaKnown RBP11.37□□□□□ -0.59
SFSWAP-208ENST00000539506 STARP49675 285 aa11.37□□□□□ -0.59
SFSWAP-208ENST00000539506 ACTA2P62736 377 aa11.37□□□□□ -0.59
SFSWAP-208ENST00000539506 ACTG2P63267 376 aa11.37□□□□□ -0.59
SFSWAP-208ENST00000539506 HDDC2Q7Z4H3 204 aa11.37□□□□□ -0.59
SFSWAP-208ENST00000539506 BIVMQ86UB2 503 aa11.37□□□□□ -0.59
SFSWAP-208ENST00000539506 CBLN2Q8IUK8 224 aa11.37□□□□□ -0.59
SFSWAP-208ENST00000539506 LRRC75AQ8NAA5 344 aa11.37□□□□□ -0.59
SFSWAP-208ENST00000539506 OR2AK2Q8NG84 335 aa11.37□□□□□ -0.59
SFSWAP-208ENST00000539506 G6PC3Q9BUM1 346 aa11.37□□□□□ -0.59
SFSWAP-208ENST00000539506 MED11Q9P086 117 aa11.37□□□□□ -0.59
SFSWAP-208ENST00000539506 ZNF337Q9Y3M9 751 aa11.37□□□□□ -0.59
SFSWAP-208ENST00000539506 IGHV5-51A0A0C4DH38 117 aa11.37□□□□□ -0.59
SFSWAP-208ENST00000539506 SOX1O00570 391 aaPredicted RBP11.37□□□□□ -0.59
SFSWAP-208ENST00000539506 GSTZ1O43708 216 aaPredicted RBP11.37□□□□□ -0.59
SFSWAP-208ENST00000539506 ATG12O94817 140 aa11.37□□□□□ -0.59
SFSWAP-208ENST00000539506 NDUFB6O95139 128 aa11.37□□□□□ -0.59
SFSWAP-208ENST00000539506 LIPNQ5VXI9 398 aa11.37□□□□□ -0.59
SFSWAP-208ENST00000539506 TSSK4Q6SA08 328 aa11.37□□□□□ -0.59
SFSWAP-208ENST00000539506 EXD3Q8N9H8 876 aa11.37□□□□□ -0.59
SFSWAP-208ENST00000539506 PLPP7Q8NBV4 271 aa11.37□□□□□ -0.59
SFSWAP-208ENST00000539506 FAM71CQ8NEG0 241 aa11.37□□□□□ -0.59
SFSWAP-208ENST00000539506 RPS4Y2Q8TD47 263 aa11.37□□□□□ -0.59
SFSWAP-208ENST00000539506 PTPMT1Q8WUK0 201 aaPredicted RBP11.37□□□□□ -0.59
SFSWAP-208ENST00000539506 MSRAQ9UJ68 235 aa11.37□□□□□ -0.59
SFSWAP-208ENST00000539506 C2CD4DB7Z1M9 353 aa11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 NSA2O95478 260 aaKnown RBP11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 COL19A1Q14993 1142 aa11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 SLC35D2Q76EJ3 337 aa11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 ZNF627Q7L945 461 aa11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 ATG4DQ86TL0 474 aaPredicted RBP11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 ZNF546Q86UE3 836 aa11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 ZNF471Q9BX82 626 aaPredicted RBP11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 PLEKHA6Q9Y2H5 1048 aa11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 THADAQ6YHU6 1953 aa11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 KRBOX1C9JBD0 128 aa11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 BET1O15155 118 aa11.36□□□□□ -0.59
SFSWAP-208ENST00000539506 SRPX2O60687 465 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms