RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 DGUOKQ16854 277 aa1.97□□□□□ -2.09
CCDC7-209ENST00000539197 ENPP6Q6UWR7 440 aa1.97□□□□□ -2.09
CCDC7-209ENST00000539197 KDM7AQ6ZMT4 941 aa1.97□□□□□ -2.09
CCDC7-209ENST00000539197 FAM43BQ6ZT52 329 aaPredicted RBP1.97□□□□□ -2.09
CCDC7-209ENST00000539197 VSTM4Q8IW00 320 aa1.97□□□□□ -2.09
CCDC7-209ENST00000539197 OR5D13Q8NGL4 314 aa1.97□□□□□ -2.09
CCDC7-209ENST00000539197 LRRC58Q96CX6 371 aa1.97□□□□□ -2.09
CCDC7-209ENST00000539197 RBMXL1Q96E39 390 aaKnown RBP1.97□□□□□ -2.09
CCDC7-209ENST00000539197 DTNBP1Q96EV8 351 aa1.97□□□□□ -2.09
CCDC7-209ENST00000539197 MS4A4EQ96PG1 132 aa1.97□□□□□ -2.09
CCDC7-209ENST00000539197 DOK1Q99704 481 aa1.97□□□□□ -2.09
CCDC7-209ENST00000539197 PARD6BQ9BYG5 372 aa1.97□□□□□ -2.09
CCDC7-209ENST00000539197 MFFQ9GZY8 342 aa1.97□□□□□ -2.09
CCDC7-209ENST00000539197 RMND5AQ9H871 391 aa1.97□□□□□ -2.09
CCDC7-209ENST00000539197 CTSFQ9UBX1 484 aa1.97□□□□□ -2.09
CCDC7-209ENST00000539197 PCP4L1A6NKN8 68 aa1.96□□□□□ -2.1
CCDC7-209ENST00000539197 BCHEP06276 602 aa1.96□□□□□ -2.1
CCDC7-209ENST00000539197 C2P06681 752 aa1.96□□□□□ -2.1
CCDC7-209ENST00000539197 YAP1P46937 504 aaKnown RBP1.96□□□□□ -2.1
CCDC7-209ENST00000539197 POU2AF1Q16633 256 aa1.96□□□□□ -2.1
CCDC7-209ENST00000539197 EXOC3L2Q2M3D2 409 aa1.96□□□□□ -2.1
CCDC7-209ENST00000539197 PDZK1Q5T2W1 519 aa1.96□□□□□ -2.1
CCDC7-209ENST00000539197 LRRC74BQ6ZQY2 392 aa1.96□□□□□ -2.1
CCDC7-209ENST00000539197 PUSL1Q8N0Z8 303 aaKnown RBP1.96□□□□□ -2.1
CCDC7-209ENST00000539197 STPG2Q8N412 459 aa1.96□□□□□ -2.1
CCDC7-209ENST00000539197 ABHD3Q8WU67 409 aa1.96□□□□□ -2.1
CCDC7-209ENST00000539197 IFT74Q96LB3 600 aa1.96□□□□□ -2.1
CCDC7-209ENST00000539197 P2RX4Q99571 388 aa1.96□□□□□ -2.1
CCDC7-209ENST00000539197 FOXC2Q99958 501 aa1.96□□□□□ -2.1
CCDC7-209ENST00000539197 RARRES2Q99969 163 aa1.96□□□□□ -2.1
CCDC7-209ENST00000539197 SULT4A1Q9BR01 284 aa1.96□□□□□ -2.1
CCDC7-209ENST00000539197 SLC25A2Q9BXI2 301 aa1.96□□□□□ -2.1
CCDC7-209ENST00000539197 MRPL37Q9BZE1 423 aaKnown RBP1.96□□□□□ -2.1
CCDC7-209ENST00000539197 PPA2Q9H2U2 334 aa1.96□□□□□ -2.1
CCDC7-209ENST00000539197 CDH9Q9ULB4 789 aa1.96□□□□□ -2.1
CCDC7-209ENST00000539197 IGLV1-50A0A075B6I6 118 aa1.95□□□□□ -2.1
CCDC7-209ENST00000539197 TRAV39A0A0B4J263 110 aa1.95□□□□□ -2.1
CCDC7-209ENST00000539197 HIDE1A8MVS5 230 aa1.95□□□□□ -2.1
CCDC7-209ENST00000539197 MAGEB3O15480 346 aa1.95□□□□□ -2.1
CCDC7-209ENST00000539197 SOX15O60248 233 aa1.95□□□□□ -2.1
CCDC7-209ENST00000539197 FCMRO60667 390 aa1.95□□□□□ -2.1
CCDC7-209ENST00000539197 OR7A10O76100 309 aa1.95□□□□□ -2.1
CCDC7-209ENST00000539197 RAB3DO95716 219 aa1.95□□□□□ -2.1
CCDC7-209ENST00000539197 GUCA1CO95843 209 aa1.95□□□□□ -2.1
CCDC7-209ENST00000539197 IQCF3P0C7M6 154 aa1.95□□□□□ -2.1
CCDC7-209ENST00000539197 DESP17661 470 aa1.95□□□□□ -2.1
CCDC7-209ENST00000539197 SERPINB5P36952 375 aa1.95□□□□□ -2.1
CCDC7-209ENST00000539197 CCT3P49368 545 aaKnown RBP1.95□□□□□ -2.1
CCDC7-209ENST00000539197 RORCP51449 518 aa1.95□□□□□ -2.1
CCDC7-209ENST00000539197 OGDHQ02218 1023 aa1.95□□□□□ -2.1
CCDC7-209ENST00000539197 ZNF92Q03936 586 aa1.95□□□□□ -2.1
CCDC7-209ENST00000539197 PON3Q15166 354 aa1.95□□□□□ -2.1
CCDC7-209ENST00000539197 IRF4Q15306 451 aa1.95□□□□□ -2.1
CCDC7-209ENST00000539197 HDDC2Q7Z4H3 204 aa1.95□□□□□ -2.1
CCDC7-209ENST00000539197 WDR86Q86TI4 376 aa1.95□□□□□ -2.1
CCDC7-209ENST00000539197 TMEM135Q86UB9 458 aa1.95□□□□□ -2.1
CCDC7-209ENST00000539197 CALHM1Q8IU99 346 aa1.95□□□□□ -2.1
CCDC7-209ENST00000539197 FAM83FQ8NEG4 500 aaPredicted RBP1.95□□□□□ -2.1
CCDC7-209ENST00000539197 OR2T34Q8NGX1 318 aa1.95□□□□□ -2.1
CCDC7-209ENST00000539197 LKAAEAR1Q8TD35 194 aa1.95□□□□□ -2.1
CCDC7-209ENST00000539197 CREB3L1Q96BA8 519 aa1.95□□□□□ -2.1
CCDC7-209ENST00000539197 FAM3DQ96BQ1 224 aa1.95□□□□□ -2.1
CCDC7-209ENST00000539197 C10orf35Q96D05 121 aa1.95□□□□□ -2.1
CCDC7-209ENST00000539197 TSGA13Q96PP4 275 aa1.95□□□□□ -2.1
CCDC7-209ENST00000539197 TMEM59Q9BXS4 323 aa1.95□□□□□ -2.1
CCDC7-209ENST00000539197 RPF2Q9H7B2 306 aaKnown RBP1.95□□□□□ -2.1
CCDC7-209ENST00000539197 SYNDIG1Q9H7V2 258 aa1.95□□□□□ -2.1
CCDC7-209ENST00000539197 C12orf10Q9HB07 376 aa1.95□□□□□ -2.1
CCDC7-209ENST00000539197 NMRAL1Q9HBL8 299 aa1.95□□□□□ -2.1
CCDC7-209ENST00000539197 FAM49BQ9NUQ9 324 aa1.95□□□□□ -2.1
CCDC7-209ENST00000539197 TUBGCP6Q96RT7 1819 aa1.95□□□□□ -2.1
CCDC7-209ENST00000539197 CCL21O00585 134 aa1.94□□□□□ -2.1
CCDC7-209ENST00000539197 IGHV2-5P01817 119 aa1.94□□□□□ -2.1
CCDC7-209ENST00000539197 C1GALT1C1LP0DN25 315 aa1.94□□□□□ -2.1
CCDC7-209ENST00000539197 CD1CP29017 333 aa1.94□□□□□ -2.1
CCDC7-209ENST00000539197 CDKN2BP42772 138 aa1.94□□□□□ -2.1
CCDC7-209ENST00000539197 CDH4P55283 916 aa1.94□□□□□ -2.1
CCDC7-209ENST00000539197 LOXL1Q08397 574 aaPredicted RBP1.94□□□□□ -2.1
CCDC7-209ENST00000539197 CFAP157Q5JU67 520 aa1.94□□□□□ -2.1
CCDC7-209ENST00000539197 ATAD3BQ5T9A4 648 aa1.94□□□□□ -2.1
CCDC7-209ENST00000539197 RAET1LQ5VY80 246 aa1.94□□□□□ -2.1
CCDC7-209ENST00000539197 GALNT17Q6IS24 598 aa1.94□□□□□ -2.1
CCDC7-209ENST00000539197 TEX9Q8N6V9 391 aa1.94□□□□□ -2.1
CCDC7-209ENST00000539197 TRPV1Q8NER1 839 aa1.94□□□□□ -2.1
CCDC7-209ENST00000539197 RNF139Q8WU17 664 aa1.94□□□□□ -2.1
CCDC7-209ENST00000539197 ESR2Q92731 530 aa1.94□□□□□ -2.1
CCDC7-209ENST00000539197 SYAP1Q96A49 352 aaPredicted RBP1.94□□□□□ -2.1
CCDC7-209ENST00000539197 NARS2Q96I59 477 aaKnown RBP1.94□□□□□ -2.1
CCDC7-209ENST00000539197 NIPAL2Q9H841 368 aa1.94□□□□□ -2.1
CCDC7-209ENST00000539197 UVRAGQ9P2Y5 699 aa1.94□□□□□ -2.1
CCDC7-209ENST00000539197 EPS15L1Q9UBC2 864 aa1.94□□□□□ -2.1
CCDC7-209ENST00000539197 PTBP2Q9UKA9 531 aaKnown RBP1.94□□□□□ -2.1
CCDC7-209ENST00000539197 BLOC1S6Q9UL45 172 aa1.94□□□□□ -2.1
CCDC7-209ENST00000539197 ATP6V0A2Q9Y487 856 aa1.94□□□□□ -2.1
CCDC7-209ENST00000539197 WDR62O43379 1518 aa1.93□□□□□ -2.1
CCDC7-209ENST00000539197 ZNF726A6NNF4 738 aa1.93□□□□□ -2.1
CCDC7-209ENST00000539197 ZNF850A8MQ14 1090 aa1.93□□□□□ -2.1
CCDC7-209ENST00000539197 GMFGO60234 142 aa1.93□□□□□ -2.1
CCDC7-209ENST00000539197 EIF3GO75821 320 aaKnown RBP eCLIP1.93□□□□□ -2.1
CCDC7-209ENST00000539197 PTMAP06454 111 aaKnown RBP1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms