RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 C1orf100Q5SVJ3 147 aa6.25□□□□□ -1.41
PROM1-219ENST00000539194 C1QL3Q5VWW1 255 aa6.25□□□□□ -1.41
PROM1-219ENST00000539194 OR5M10Q6IEU7 315 aa6.25□□□□□ -1.41
PROM1-219ENST00000539194 LRRN1Q6UXK5 716 aa6.25□□□□□ -1.41
PROM1-219ENST00000539194 TFAP2EQ6VUC0 442 aa6.25□□□□□ -1.41
PROM1-219ENST00000539194 OR1S1Q8NH92 325 aa6.25□□□□□ -1.41
PROM1-219ENST00000539194 ST7LQ8TDW4 575 aa6.25□□□□□ -1.41
PROM1-219ENST00000539194 C15orf40Q8WUR7 153 aa6.25□□□□□ -1.41
PROM1-219ENST00000539194 MAP3K3Q99759 626 aa6.25□□□□□ -1.41
PROM1-219ENST00000539194 RBCK1Q9BYM8 510 aa6.25□□□□□ -1.41
PROM1-219ENST00000539194 PRTFDC1Q9NRG1 225 aa6.25□□□□□ -1.41
PROM1-219ENST00000539194 SLC2A8Q9NY64 477 aa6.25□□□□□ -1.41
PROM1-219ENST00000539194 A0A1W2PPL8 197 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 OR14I1A6ND48 311 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 SERPINI2O75830 405 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 ACSM4P0C7M7 580 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 ZP3P21754 424 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 ITPKBP27987 946 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 GRPRP30550 384 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 AP3S2P59780 193 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 MFGE8Q08431 387 aaPredicted RBP6.24□□□□□ -1.41
PROM1-219ENST00000539194 SLC17A1Q14916 467 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 EBPQ15125 230 aaKnown RBP6.24□□□□□ -1.41
PROM1-219ENST00000539194 NR0B2Q15466 257 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 TMEM69Q5SWH9 247 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 OR52B4Q8NGK2 314 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 OR6S1Q8NH40 331 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 ZNF417Q8TAU3 575 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 ZDHHC1Q8WTX9 485 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 SEH1LQ96EE3 360 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 SLC46A1Q96NT5 459 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 DGAT2Q96PD7 388 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 MTIF3Q9H2K0 278 aaKnown RBP6.24□□□□□ -1.41
PROM1-219ENST00000539194 KCNG2Q9UJ96 466 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 B9D1Q9UPM9 204 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 A0A1W2PPC4 97 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 GNB5O14775 395 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 OR10H2O60403 315 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 ICOSLGO75144 302 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 IFNA7P01567 189 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 F13BP05160 661 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 TACSTD2P09758 323 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 CD1CP29017 333 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 RORAP35398 523 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 ZNF81P51508 661 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 CTXN1P60606 82 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 RASGEF1BQ0VAM2 473 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 RBMS2Q15434 407 aaKnown RBP6.24□□□□□ -1.41
PROM1-219ENST00000539194 SGCBQ16585 318 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 RNASE12Q5GAN4 147 aaKnown RBP6.24□□□□□ -1.41
PROM1-219ENST00000539194 ZNF660Q6AZW8 331 aaPredicted RBP6.24□□□□□ -1.41
PROM1-219ENST00000539194 FAM198BQ6UWH4 519 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 COMMD7Q86VX2 200 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 MUC20Q8N307 709 aaPredicted RBP6.24□□□□□ -1.41
PROM1-219ENST00000539194 PAQR4Q8N4S7 273 aaPredicted RBP6.24□□□□□ -1.41
PROM1-219ENST00000539194 PHF21AQ96BD5 680 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 SFXN2Q96NB2 322 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 CHST6Q9GZX3 395 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 MRPS18BQ9Y676 258 aaKnown RBP6.24□□□□□ -1.41
PROM1-219ENST00000539194 FREM2Q5SZK8 3169 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 SULT1C2O00338 296 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 KDM4BO94953 1096 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 RPA2P15927 270 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 NAGAP17050 411 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 NFYAP23511 347 aaPredicted RBP6.24□□□□□ -1.41
PROM1-219ENST00000539194 SERTAD2Q14140 314 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 UBXN2BQ14CS0 331 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 SFRP5Q5T4F7 317 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 SLC51BQ86UW2 128 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 ZNF679Q8IYX0 411 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 OR8H3Q8N146 312 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 FTMTQ8N4E7 242 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 OR1J4Q8NGS1 313 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 OR6K6Q8NGW6 343 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 TMEM106AQ96A25 262 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 SLC41A2Q96JW4 573 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 PELOQ9BRX2 385 aaKnown RBP6.24□□□□□ -1.41
PROM1-219ENST00000539194 SEMA4CQ9C0C4 833 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 KCNK15Q9H427 330 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 FBLN5Q9UBX5 448 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 PLEKHA6Q9Y2H5 1048 aa6.24□□□□□ -1.41
PROM1-219ENST00000539194 A0A1B0GVT2 93 aa6.23□□□□□ -1.41
PROM1-219ENST00000539194 TCRBV21S2A2A0A5A6 115 aa6.23□□□□□ -1.41
PROM1-219ENST00000539194 PRSS37A4D1T9 235 aa6.23□□□□□ -1.41
PROM1-219ENST00000539194 ZSCAN5BA6NJL1 495 aa6.23□□□□□ -1.41
PROM1-219ENST00000539194 PHYHO14832 338 aa6.23□□□□□ -1.41
PROM1-219ENST00000539194 CDC40O60508 579 aaKnown RBP eCLIP6.23□□□□□ -1.41
PROM1-219ENST00000539194 CDC123O75794 336 aaPredicted RBP6.23□□□□□ -1.41
PROM1-219ENST00000539194 HPP00738 406 aa6.23□□□□□ -1.41
PROM1-219ENST00000539194 TACR3P29371 465 aa6.23□□□□□ -1.41
PROM1-219ENST00000539194 SEC61A1P61619 476 aaKnown RBP6.23□□□□□ -1.41
PROM1-219ENST00000539194 ZP4Q12836 540 aa6.23□□□□□ -1.41
PROM1-219ENST00000539194 GRM7Q14831 915 aa6.23□□□□□ -1.41
PROM1-219ENST00000539194 CCDC85BQ15834 202 aaPredicted RBP6.23□□□□□ -1.41
PROM1-219ENST00000539194 NNATQ16517 81 aa6.23□□□□□ -1.41
PROM1-219ENST00000539194 C2orf76Q3KRA6 126 aa6.23□□□□□ -1.41
PROM1-219ENST00000539194 CHRDL2Q6WN34 429 aa6.23□□□□□ -1.41
PROM1-219ENST00000539194 LRRC69Q6ZNQ3 347 aa6.23□□□□□ -1.41
PROM1-219ENST00000539194 DPY19L4Q7Z388 723 aa6.23□□□□□ -1.41
PROM1-219ENST00000539194 HDDC2Q7Z4H3 204 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms