RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 IRF3Q14653 427 aa9.1□□□□□ -0.95
CLPB-210ENST00000539148 ACKR1Q16570 336 aa9.1□□□□□ -0.95
CLPB-210ENST00000539148 TIGD6Q17RP2 521 aa9.1□□□□□ -0.95
CLPB-210ENST00000539148 PGGHGQ32M88 737 aa9.1□□□□□ -0.95
CLPB-210ENST00000539148 ZNF829Q3KNS6 432 aaPredicted RBP9.1□□□□□ -0.95
CLPB-210ENST00000539148 CLEC12AQ5QGZ9 265 aa9.1□□□□□ -0.95
CLPB-210ENST00000539148 THEM4Q5T1C6 240 aa9.1□□□□□ -0.95
CLPB-210ENST00000539148 C1QTNF12Q5T7M4 302 aa9.1□□□□□ -0.95
CLPB-210ENST00000539148 FGD2Q7Z6J4 655 aa9.1□□□□□ -0.95
CLPB-210ENST00000539148 GID4Q8IVV7 300 aa9.1□□□□□ -0.95
CLPB-210ENST00000539148 GPR137CQ8N3F9 429 aa9.1□□□□□ -0.95
CLPB-210ENST00000539148 ZNF843Q8N446 348 aa9.1□□□□□ -0.95
CLPB-210ENST00000539148 CNEP1R1Q8N9A8 125 aa9.1□□□□□ -0.95
CLPB-210ENST00000539148 MOSPD2Q8NHP6 518 aa9.1□□□□□ -0.95
CLPB-210ENST00000539148 TMEM163Q8TC26 289 aa9.1□□□□□ -0.95
CLPB-210ENST00000539148 BORCS5Q969J3 196 aa9.1□□□□□ -0.95
CLPB-210ENST00000539148 RELTQ969Z4 430 aa9.1□□□□□ -0.95
CLPB-210ENST00000539148 USB1Q9BQ65 265 aaKnown RBP9.1□□□□□ -0.95
CLPB-210ENST00000539148 HMG20AQ9NP66 347 aa9.1□□□□□ -0.95
CLPB-210ENST00000539148 PAK1IP1Q9NWT1 392 aaPredicted RBP9.1□□□□□ -0.95
CLPB-210ENST00000539148 UPB1Q9UBR1 384 aa9.1□□□□□ -0.95
CLPB-210ENST00000539148 DIMT1Q9UNQ2 313 aaKnown RBP9.1□□□□□ -0.95
CLPB-210ENST00000539148 MEMO1Q9Y316 297 aa9.1□□□□□ -0.95
CLPB-210ENST00000539148 IER3IP1Q9Y5U9 82 aa9.1□□□□□ -0.95
CLPB-210ENST00000539148 INTS1Q8N201 2190 aaKnown RBP9.1□□□□□ -0.95
CLPB-210ENST00000539148 MYO18BQ8IUG5 2567 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 SLC35F4A4IF30 521 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 PRR23D1E9PI22 279 aaPredicted RBP9.09□□□□□ -0.95
CLPB-210ENST00000539148 BHLHE40O14503 412 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 TRAF3IP2O43734 574 aaPredicted RBP9.09□□□□□ -0.95
CLPB-210ENST00000539148 AQP8O94778 261 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 INMTO95050 263 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 PPP1R3DO95685 299 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 FADS2O95864 444 aaKnown RBP9.09□□□□□ -0.95
CLPB-210ENST00000539148 TGM6O95932 706 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 PRR23D2P0DMB1 279 aaPredicted RBP9.09□□□□□ -0.95
CLPB-210ENST00000539148 GLI4P10075 376 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 MYL12AP19105 171 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 FUT4P22083 530 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 AGTR1P30556 359 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 CEACAM8P31997 349 aaPredicted RBP9.09□□□□□ -0.95
CLPB-210ENST00000539148 CSNK1A1P48729 337 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 P2RY4P51582 365 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 ERVK-25P63136 954 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 LSM11P83369 360 aaKnown RBP eCLIP9.09□□□□□ -0.95
CLPB-210ENST00000539148 EFNB1P98172 346 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 PMPCAQ10713 525 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 STK11Q15831 433 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 SNAPC1Q16533 368 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 C4orf17Q53FE4 359 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 NIPAL3Q6P499 406 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 MYO7BQ6PIF6 2116 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 BEND4Q6ZU67 534 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 USP43Q70EL4 1123 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 SSX8Q7RTT4 187 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 EGFL6Q8IUX8 553 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 TUSC5Q8IXB3 177 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 UBE2J2Q8N2K1 259 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 OR2T4Q8NH00 348 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 PRR7Q8TB68 274 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 GPA33Q99795 319 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 COQ7Q99807 217 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 LINC00470Q9BZP3 86 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 WDR12Q9GZL7 423 aaKnown RBP9.09□□□□□ -0.95
CLPB-210ENST00000539148 SLCO5A1Q9H2Y9 848 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 FGF20Q9NP95 211 aaPredicted RBP9.09□□□□□ -0.95
CLPB-210ENST00000539148 CMC2Q9NRP2 79 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 B3GAT1Q9P2W7 334 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 SH3BGRL2Q9UJC5 107 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 TINAGQ9UJW2 476 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 ZNF346Q9UL40 294 aaKnown RBP9.09□□□□□ -0.95
CLPB-210ENST00000539148 PROCRQ9UNN8 238 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 EXOSC1Q9Y3B2 195 aaKnown RBP9.09□□□□□ -0.95
CLPB-210ENST00000539148 FAM215AQ9Y5M1 114 aa9.09□□□□□ -0.95
CLPB-210ENST00000539148 POLEQ07864 2286 aa9.08□□□□□ -0.96
CLPB-210ENST00000539148 TMEM129A0AVI4 362 aa9.08□□□□□ -0.96
CLPB-210ENST00000539148 ZNF587BE7ETH6 402 aa9.08□□□□□ -0.96
CLPB-210ENST00000539148 CCRL2O00421 344 aa9.08□□□□□ -0.96
CLPB-210ENST00000539148 ARHGEF9O43307 516 aa9.08□□□□□ -0.96
CLPB-210ENST00000539148 ATE1O95260 518 aa9.08□□□□□ -0.96
CLPB-210ENST00000539148 RAB36O95755 333 aa9.08□□□□□ -0.96
CLPB-210ENST00000539148 CD8BP10966 210 aa9.08□□□□□ -0.96
CLPB-210ENST00000539148 CD36P16671 472 aa9.08□□□□□ -0.96
CLPB-210ENST00000539148 CHRNB4P30926 498 aa9.08□□□□□ -0.96
CLPB-210ENST00000539148 SOX6P35712 828 aa9.08□□□□□ -0.96
CLPB-210ENST00000539148 CTF1Q16619 201 aa9.08□□□□□ -0.96
CLPB-210ENST00000539148 FAM122BQ7Z309 247 aa9.08□□□□□ -0.96
CLPB-210ENST00000539148 IGFN1Q86VF2 1251 aa9.08□□□□□ -0.96
CLPB-210ENST00000539148 MEX3DQ86XN8 651 aaKnown RBP9.08□□□□□ -0.96
CLPB-210ENST00000539148 KIF18BQ86Y91 864 aa9.08□□□□□ -0.96
CLPB-210ENST00000539148 KDM8Q8N371 416 aa9.08□□□□□ -0.96
CLPB-210ENST00000539148 LRRC75AQ8NAA5 344 aa9.08□□□□□ -0.96
CLPB-210ENST00000539148 C9orf106Q8NAJ2 232 aa9.08□□□□□ -0.96
CLPB-210ENST00000539148 OR52E2Q8NGJ4 325 aa9.08□□□□□ -0.96
CLPB-210ENST00000539148 ASB10Q8WXI3 467 aa9.08□□□□□ -0.96
CLPB-210ENST00000539148 LGALS12Q96DT0 336 aa9.08□□□□□ -0.96
CLPB-210ENST00000539148 MRPL48Q96GC5 212 aaKnown RBP9.08□□□□□ -0.96
CLPB-210ENST00000539148 DACH2Q96NX9 599 aa9.08□□□□□ -0.96
CLPB-210ENST00000539148 JAM3Q9BX67 310 aa9.08□□□□□ -0.96
CLPB-210ENST00000539148 ENKD1Q9H0I2 346 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms