RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 VIMP08670 466 aaKnown RBP10.69□□□□□ -0.7
VAMP1-206ENST00000538970 MMP7P09237 267 aaPredicted RBP10.69□□□□□ -0.7
VAMP1-206ENST00000538970 GAAP10253 952 aa10.69□□□□□ -0.7
VAMP1-206ENST00000538970 UGT2B15P54855 530 aa10.69□□□□□ -0.7
VAMP1-206ENST00000538970 KLF3P57682 345 aaPredicted RBP10.69□□□□□ -0.7
VAMP1-206ENST00000538970 CLRN1P58418 232 aa10.69□□□□□ -0.7
VAMP1-206ENST00000538970 LMO4P61968 165 aa10.69□□□□□ -0.7
VAMP1-206ENST00000538970 MYBPC1Q00872 1141 aa10.69□□□□□ -0.7
VAMP1-206ENST00000538970 RPL18Q07020 188 aaKnown RBP10.69□□□□□ -0.7
VAMP1-206ENST00000538970 TBC1D28Q2M2D7 210 aa10.69□□□□□ -0.7
VAMP1-206ENST00000538970 CCDC80Q76M96 950 aa10.69□□□□□ -0.7
VAMP1-206ENST00000538970 PFN4Q8NHR9 129 aa10.69□□□□□ -0.7
VAMP1-206ENST00000538970 ZNF519Q8TB69 540 aa10.69□□□□□ -0.7
VAMP1-206ENST00000538970 SYNPRQ8TBG9 265 aa10.69□□□□□ -0.7
VAMP1-206ENST00000538970 ASB10Q8WXI3 467 aa10.69□□□□□ -0.7
VAMP1-206ENST00000538970 MAGEB18Q96M61 343 aa10.69□□□□□ -0.7
VAMP1-206ENST00000538970 OR51B6Q9H340 312 aa10.69□□□□□ -0.7
VAMP1-206ENST00000538970 METTL17Q9H7H0 456 aaPredicted RBP10.69□□□□□ -0.7
VAMP1-206ENST00000538970 RNF121Q9H920 327 aa10.69□□□□□ -0.7
VAMP1-206ENST00000538970 INTS9Q9NV88 658 aaKnown RBP10.69□□□□□ -0.7
VAMP1-206ENST00000538970 TREM2Q9NZC2 230 aa10.69□□□□□ -0.7
VAMP1-206ENST00000538970 METRNQ9UJH8 293 aa10.69□□□□□ -0.7
VAMP1-206ENST00000538970 GRIP1Q9Y3R0 1128 aa10.69□□□□□ -0.7
VAMP1-206ENST00000538970 A0A1W2PRG6 482 aa10.68□□□□□ -0.7
VAMP1-206ENST00000538970 CENPBD1B2RD01 187 aa10.68□□□□□ -0.7
VAMP1-206ENST00000538970 MCIDASD6RGH6 385 aa10.68□□□□□ -0.7
VAMP1-206ENST00000538970 FBP2O00757 339 aa10.68□□□□□ -0.7
VAMP1-206ENST00000538970 PTHP01270 115 aa10.68□□□□□ -0.7
VAMP1-206ENST00000538970 IGF2P01344 180 aa10.68□□□□□ -0.7
VAMP1-206ENST00000538970 F13BP05160 661 aa10.68□□□□□ -0.7
VAMP1-206ENST00000538970 LCKP06239 509 aa10.68□□□□□ -0.7
VAMP1-206ENST00000538970 RBM34P42696 430 aaKnown RBP10.68□□□□□ -0.7
VAMP1-206ENST00000538970 ZNF84P51523 738 aa10.68□□□□□ -0.7
VAMP1-206ENST00000538970 ZNF133P52736 654 aaPredicted RBP10.68□□□□□ -0.7
VAMP1-206ENST00000538970 SELENOVP59797 346 aa10.68□□□□□ -0.7
VAMP1-206ENST00000538970 CCL8P80075 99 aa10.68□□□□□ -0.7
VAMP1-206ENST00000538970 PCGF3Q3KNV8 242 aa10.68□□□□□ -0.7
VAMP1-206ENST00000538970 MMEL1Q495T6 779 aa10.68□□□□□ -0.7
VAMP1-206ENST00000538970 C10orf128Q5T292 105 aa10.68□□□□□ -0.7
VAMP1-206ENST00000538970 TMEM154Q6P9G4 183 aa10.68□□□□□ -0.7
VAMP1-206ENST00000538970 HDDC2Q7Z4H3 204 aa10.68□□□□□ -0.7
VAMP1-206ENST00000538970 NKAIN4Q8IVV8 208 aa10.68□□□□□ -0.7
VAMP1-206ENST00000538970 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.68□□□□□ -0.7
VAMP1-206ENST00000538970 SYT14Q8NB59 555 aa10.68□□□□□ -0.7
VAMP1-206ENST00000538970 RBM15BQ8NDT2 890 aaKnown RBP10.68□□□□□ -0.7
VAMP1-206ENST00000538970 SEMA6DQ8NFY4 1073 aa10.68□□□□□ -0.7
VAMP1-206ENST00000538970 OR1J2Q8NGS2 313 aa10.68□□□□□ -0.7
VAMP1-206ENST00000538970 OR51F2Q8NH61 342 aa10.68□□□□□ -0.7
VAMP1-206ENST00000538970 TMEM255BQ8WV15 326 aa10.68□□□□□ -0.7
VAMP1-206ENST00000538970 SNX33Q8WV41 574 aa10.68□□□□□ -0.7
VAMP1-206ENST00000538970 LRRC37BQ96QE4 947 aa10.68□□□□□ -0.7
VAMP1-206ENST00000538970 SIKE1Q9BRV8 207 aa10.68□□□□□ -0.7
VAMP1-206ENST00000538970 BCL2L14Q9BZR8 327 aa10.68□□□□□ -0.7
VAMP1-206ENST00000538970 NANOGQ9H9S0 305 aa10.68□□□□□ -0.7
VAMP1-206ENST00000538970 NPHS2Q9NP85 383 aa10.68□□□□□ -0.7
VAMP1-206ENST00000538970 C20orf141Q9NUB4 165 aa10.68□□□□□ -0.7
VAMP1-206ENST00000538970 SLCO1C1Q9NYB5 712 aa10.68□□□□□ -0.7
VAMP1-206ENST00000538970 NKIRAS2Q9NYR9 191 aa10.68□□□□□ -0.7
VAMP1-206ENST00000538970 GPR160Q9UJ42 338 aa10.68□□□□□ -0.7
VAMP1-206ENST00000538970 SH3GLB1Q9Y371 365 aa10.68□□□□□ -0.7
VAMP1-206ENST00000538970 A0A0A6YYJ9 748 aa10.67□□□□□ -0.7
VAMP1-206ENST00000538970 IQCMA0A1B0GVH7 501 aa10.67□□□□□ -0.7
VAMP1-206ENST00000538970 FXYD1O00168 92 aa10.67□□□□□ -0.7
VAMP1-206ENST00000538970 CDC14BO60729 498 aa10.67□□□□□ -0.7
VAMP1-206ENST00000538970 EDF1O60869 148 aaKnown RBP10.67□□□□□ -0.7
VAMP1-206ENST00000538970 TRMUO75648 421 aaKnown RBP10.67□□□□□ -0.7
VAMP1-206ENST00000538970 OR7A10O76100 309 aa10.67□□□□□ -0.7
VAMP1-206ENST00000538970 OR5F1O95221 314 aa10.67□□□□□ -0.7
VAMP1-206ENST00000538970 VENTXO95231 258 aa10.67□□□□□ -0.7
VAMP1-206ENST00000538970 SLC2A10O95528 541 aa10.67□□□□□ -0.7
VAMP1-206ENST00000538970 TSPAN19P0C672 248 aa10.67□□□□□ -0.7
VAMP1-206ENST00000538970 ACADSP16219 412 aa10.67□□□□□ -0.7
VAMP1-206ENST00000538970 FUT1P19526 365 aa10.67□□□□□ -0.7
VAMP1-206ENST00000538970 TNFRSF1BP20333 461 aa10.67□□□□□ -0.7
VAMP1-206ENST00000538970 AQP2P41181 271 aa10.67□□□□□ -0.7
VAMP1-206ENST00000538970 CRYBB2P43320 205 aa10.67□□□□□ -0.7
VAMP1-206ENST00000538970 RAD52P43351 418 aa10.67□□□□□ -0.7
VAMP1-206ENST00000538970 DAP3P51398 398 aaKnown RBP10.67□□□□□ -0.7
VAMP1-206ENST00000538970 UCP2P55851 309 aa10.67□□□□□ -0.7
VAMP1-206ENST00000538970 TAS2R41P59536 307 aa10.67□□□□□ -0.7
VAMP1-206ENST00000538970 MRPS34P82930 218 aaKnown RBP10.67□□□□□ -0.7
VAMP1-206ENST00000538970 PLP2Q04941 152 aa10.67□□□□□ -0.7
VAMP1-206ENST00000538970 RABL3Q5HYI8 236 aa10.67□□□□□ -0.7
VAMP1-206ENST00000538970 ARMC4Q5T2S8 1044 aa10.67□□□□□ -0.7
VAMP1-206ENST00000538970 NANOGP8Q6NSW7 305 aa10.67□□□□□ -0.7
VAMP1-206ENST00000538970 CALHM3Q86XJ0 350 aa10.67□□□□□ -0.7
VAMP1-206ENST00000538970 LRRC18Q8N456 261 aa10.67□□□□□ -0.7
VAMP1-206ENST00000538970 ICA1LQ8NDH6 482 aa10.67□□□□□ -0.7
VAMP1-206ENST00000538970 CPEB3Q8NE35 698 aaKnown RBP10.67□□□□□ -0.7
VAMP1-206ENST00000538970 C11orf40Q8WZ69 217 aa10.67□□□□□ -0.7
VAMP1-206ENST00000538970 GTF3AQ92664 365 aaKnown RBP10.67□□□□□ -0.7
VAMP1-206ENST00000538970 NABP1Q96AH0 204 aa10.67□□□□□ -0.7
VAMP1-206ENST00000538970 NMD3Q96D46 503 aaKnown RBP10.67□□□□□ -0.7
VAMP1-206ENST00000538970 SGTBQ96EQ0 304 aa10.67□□□□□ -0.7
VAMP1-206ENST00000538970 POLR2J2Q9GZM3 115 aaKnown RBP10.67□□□□□ -0.7
VAMP1-206ENST00000538970 POLR2J3Q9H1A7 115 aaKnown RBP10.67□□□□□ -0.7
VAMP1-206ENST00000538970 LRMDAQ9H2I8 198 aa10.67□□□□□ -0.7
VAMP1-206ENST00000538970 OCEL1Q9H607 264 aa10.67□□□□□ -0.7
VAMP1-206ENST00000538970 ZNF665Q9H7R5 613 aa10.67□□□□□ -0.7
VAMP1-206ENST00000538970 SMURF2Q9HAU4 748 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms