RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 PARP8Q8N3A8 854 aa10.96□□□□□ -0.65
CLSTN3-208ENST00000538933 SCAIQ8N9R8 606 aa10.96□□□□□ -0.65
CLSTN3-208ENST00000538933 CYGBQ8WWM9 190 aa10.96□□□□□ -0.65
CLSTN3-208ENST00000538933 LIPHQ8WWY8 451 aa10.96□□□□□ -0.65
CLSTN3-208ENST00000538933 RDH12Q96NR8 316 aa10.96□□□□□ -0.65
CLSTN3-208ENST00000538933 GPA33Q99795 319 aa10.96□□□□□ -0.65
CLSTN3-208ENST00000538933 IFT27Q9BW83 186 aa10.96□□□□□ -0.65
CLSTN3-208ENST00000538933 OR52D1Q9H346 318 aa10.96□□□□□ -0.65
CLSTN3-208ENST00000538933 EGLN3Q9H6Z9 239 aa10.96□□□□□ -0.65
CLSTN3-208ENST00000538933 MRPL39Q9NYK5 338 aaKnown RBP10.96□□□□□ -0.65
CLSTN3-208ENST00000538933 B3GALT5Q9Y2C3 310 aa10.96□□□□□ -0.65
CLSTN3-208ENST00000538933 MCIDASD6RGH6 385 aa10.95□□□□□ -0.66
CLSTN3-208ENST00000538933 FTCDNL1E5RQL4 147 aa10.95□□□□□ -0.66
CLSTN3-208ENST00000538933 SNAP29O95721 258 aa10.95□□□□□ -0.66
CLSTN3-208ENST00000538933 ASAH2BP0C7U1 165 aa10.95□□□□□ -0.66
CLSTN3-208ENST00000538933 ZNF26P17031 533 aaPredicted RBP10.95□□□□□ -0.66
CLSTN3-208ENST00000538933 PSMB1P20618 241 aaKnown RBP10.95□□□□□ -0.66
CLSTN3-208ENST00000538933 NOS3P29474 1203 aa10.95□□□□□ -0.66
CLSTN3-208ENST00000538933 AQP2P41181 271 aa10.95□□□□□ -0.66
CLSTN3-208ENST00000538933 CRISP1P54107 249 aa10.95□□□□□ -0.66
CLSTN3-208ENST00000538933 AQP4P55087 323 aa10.95□□□□□ -0.66
CLSTN3-208ENST00000538933 DSCR9P59020 149 aa10.95□□□□□ -0.66
CLSTN3-208ENST00000538933 RPL18Q07020 188 aaKnown RBP10.95□□□□□ -0.66
CLSTN3-208ENST00000538933 PUDPQ08623 228 aa10.95□□□□□ -0.66
CLSTN3-208ENST00000538933 PON3Q15166 354 aa10.95□□□□□ -0.66
CLSTN3-208ENST00000538933 CTU2Q2VPK5 515 aaKnown RBP10.95□□□□□ -0.66
CLSTN3-208ENST00000538933 CLEC12AQ5QGZ9 265 aa10.95□□□□□ -0.66
CLSTN3-208ENST00000538933 ZNF620Q6ZNG0 422 aa10.95□□□□□ -0.66
CLSTN3-208ENST00000538933 FCRLAQ7L513 359 aa10.95□□□□□ -0.66
CLSTN3-208ENST00000538933 UEVLDQ8IX04 471 aa10.95□□□□□ -0.66
CLSTN3-208ENST00000538933 SLC43A2Q8N370 569 aa10.95□□□□□ -0.66
CLSTN3-208ENST00000538933 DHRSXQ8N5I4 330 aa10.95□□□□□ -0.66
CLSTN3-208ENST00000538933 CLDN22Q8N7P3 220 aa10.95□□□□□ -0.66
CLSTN3-208ENST00000538933 TMEM99Q8N816 258 aa10.95□□□□□ -0.66
CLSTN3-208ENST00000538933 ADGRG7Q96K78 797 aa10.95□□□□□ -0.66
CLSTN3-208ENST00000538933 SAMD8Q96LT4 415 aa10.95□□□□□ -0.66
CLSTN3-208ENST00000538933 ZNF570Q96NI8 536 aa10.95□□□□□ -0.66
CLSTN3-208ENST00000538933 TSSK6Q9BXA6 273 aa10.95□□□□□ -0.66
CLSTN3-208ENST00000538933 SRXN1Q9BYN0 137 aa10.95□□□□□ -0.66
CLSTN3-208ENST00000538933 PRRG3Q9BZD7 231 aa10.95□□□□□ -0.66
CLSTN3-208ENST00000538933 TOR3AQ9H497 397 aa10.95□□□□□ -0.66
CLSTN3-208ENST00000538933 TMEFF2Q9UIK5 374 aaPredicted RBP10.95□□□□□ -0.66
CLSTN3-208ENST00000538933 RASD1Q9Y272 281 aa10.95□□□□□ -0.66
CLSTN3-208ENST00000538933 SIGLEC7Q9Y286 467 aa10.95□□□□□ -0.66
CLSTN3-208ENST00000538933 HIF3AQ9Y2N7 669 aa10.95□□□□□ -0.66
CLSTN3-208ENST00000538933 GPR52Q9Y2T5 361 aa10.95□□□□□ -0.66
CLSTN3-208ENST00000538933 CMYA5Q8N3K9 4069 aa10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 IGHV3-15A0A0B4J1V0 119 aa10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 A0A1W2PRG6 482 aa10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 AQP7P3A6NL99 342 aa10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 H0YJX3 145 aa10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 AKAP8O43823 692 aaKnown RBP10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 VAMP5O95183 116 aa10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 PLGP00747 810 aaPredicted RBP10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 F13BP05160 661 aa10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 CD3EP07766 207 aa10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 FCGR2AP12318 317 aa10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 ZNF43P17038 809 aa10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 RPS6KA3P51812 740 aa10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 CTXN1P60606 82 aa10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 NPRL3Q12980 569 aa10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 TOP3AQ13472 1001 aaPredicted RBP10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 ZNF239Q16600 458 aaKnown RBP10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 GTF2IRD2BQ6EKJ0 949 aa10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 CASP12Q6UXS9 341 aa10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 C12orf54Q6X4T0 127 aa10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 GTF2IRD2Q86UP8 949 aa10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 IGFN1Q86VF2 1251 aa10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 DEPDC4Q8N2C3 294 aa10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 ADPRHL1Q8NDY3 354 aa10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 ANKK1Q8NFD2 765 aa10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 KBTBD8Q8NFY9 601 aa10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 OR2T33Q8NG76 320 aa10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 OR6K3Q8NGY3 331 aa10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 PLEKHA8Q96JA3 519 aa10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 OXGR1Q96P68 337 aa10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 GABARAPL3Q9BY60 117 aa10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 Q9H521 79 aa10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 INIPQ9NRY2 104 aa10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 KLHL13Q9P2N7 655 aa10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 SEC14L4Q9UDX3 406 aa10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 IL20RAQ9UHF4 553 aa10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 GMPPBQ9Y5P6 360 aa10.94□□□□□ -0.66
CLSTN3-208ENST00000538933 DPRXA6NFQ7 191 aa10.93□□□□□ -0.66
CLSTN3-208ENST00000538933 PLPP3O14495 311 aa10.93□□□□□ -0.66
CLSTN3-208ENST00000538933 PTP4A3O75365 173 aa10.93□□□□□ -0.66
CLSTN3-208ENST00000538933 PPP1R3DO95685 299 aa10.93□□□□□ -0.66
CLSTN3-208ENST00000538933 SLC25A16P16260 332 aa10.93□□□□□ -0.66
CLSTN3-208ENST00000538933 CDC42P60953 191 aa10.93□□□□□ -0.66
CLSTN3-208ENST00000538933 POU3F1Q03052 451 aaPredicted RBP10.93□□□□□ -0.66
CLSTN3-208ENST00000538933 RASGEF1BQ0VAM2 473 aa10.93□□□□□ -0.66
CLSTN3-208ENST00000538933 GINS1Q14691 196 aa10.93□□□□□ -0.66
CLSTN3-208ENST00000538933 PDLIM3Q53GG5 364 aaPredicted RBP10.93□□□□□ -0.66
CLSTN3-208ENST00000538933 TTC23Q5W5X9 447 aa10.93□□□□□ -0.66
CLSTN3-208ENST00000538933 SLC27A4Q6P1M0 643 aa10.93□□□□□ -0.66
CLSTN3-208ENST00000538933 CLEC2AQ6UVW9 174 aa10.93□□□□□ -0.66
CLSTN3-208ENST00000538933 DPY19L2P2Q6ZN68 376 aa10.93□□□□□ -0.66
CLSTN3-208ENST00000538933 CCDC103Q8IW40 242 aa10.93□□□□□ -0.66
CLSTN3-208ENST00000538933 KDM8Q8N371 416 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms