RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 LRRC75AQ8NAA5 344 aa12.9□□□□□ -0.34
RAB40B-202ENST00000538809 RBM15BQ8NDT2 890 aaKnown RBP12.9□□□□□ -0.34
RAB40B-202ENST00000538809 MCHR2Q969V1 340 aa12.9□□□□□ -0.34
RAB40B-202ENST00000538809 MRPL24Q96A35 216 aaKnown RBP12.9□□□□□ -0.34
RAB40B-202ENST00000538809 NMD3Q96D46 503 aaKnown RBP12.9□□□□□ -0.34
RAB40B-202ENST00000538809 BPIFA2Q96DR5 249 aa12.9□□□□□ -0.34
RAB40B-202ENST00000538809 FOXN4Q96NZ1 517 aa12.9□□□□□ -0.34
RAB40B-202ENST00000538809 SYT3Q9BQG1 590 aa12.9□□□□□ -0.34
RAB40B-202ENST00000538809 A0A087WUU8 490 aa12.89□□□□□ -0.35
RAB40B-202ENST00000538809 IGHV4-61A0A0C4DH41 118 aa12.89□□□□□ -0.35
RAB40B-202ENST00000538809 VSTM5A8MXK1 200 aa12.89□□□□□ -0.35
RAB40B-202ENST00000538809 FARS2O95363 451 aaKnown RBP12.89□□□□□ -0.35
RAB40B-202ENST00000538809 SLC2A10O95528 541 aa12.89□□□□□ -0.35
RAB40B-202ENST00000538809 IGHMP01871 453 aa12.89□□□□□ -0.35
RAB40B-202ENST00000538809 ADRA2AP08913 450 aa12.89□□□□□ -0.35
RAB40B-202ENST00000538809 ACADSP16219 412 aa12.89□□□□□ -0.35
RAB40B-202ENST00000538809 DAP3P51398 398 aaKnown RBP12.89□□□□□ -0.35
RAB40B-202ENST00000538809 ZNF84P51523 738 aa12.89□□□□□ -0.35
RAB40B-202ENST00000538809 GALK2Q01415 458 aa12.89□□□□□ -0.35
RAB40B-202ENST00000538809 PRKCDQ05655 676 aa12.89□□□□□ -0.35
RAB40B-202ENST00000538809 FMODQ06828 376 aa12.89□□□□□ -0.35
RAB40B-202ENST00000538809 LAPTM4AQ15012 233 aa12.89□□□□□ -0.35
RAB40B-202ENST00000538809 TRAM2Q15035 370 aa12.89□□□□□ -0.35
RAB40B-202ENST00000538809 IGFN1Q86VF2 1251 aa12.89□□□□□ -0.35
RAB40B-202ENST00000538809 NRMQ8IXM6 262 aa12.89□□□□□ -0.35
RAB40B-202ENST00000538809 PAQR4Q8N4S7 273 aaPredicted RBP12.89□□□□□ -0.35
RAB40B-202ENST00000538809 ACOT11Q8WXI4 607 aaPredicted RBP12.89□□□□□ -0.35
RAB40B-202ENST00000538809 FAM162AQ96A26 154 aa12.89□□□□□ -0.35
RAB40B-202ENST00000538809 MDFIQ99750 246 aa12.89□□□□□ -0.35
RAB40B-202ENST00000538809 FNDC11Q9BVV2 318 aa12.89□□□□□ -0.35
RAB40B-202ENST00000538809 BPESC1Q9GZL8 116 aa12.89□□□□□ -0.35
RAB40B-202ENST00000538809 OR51B6Q9H340 312 aa12.89□□□□□ -0.35
RAB40B-202ENST00000538809 DENND2DQ9H6A0 471 aaPredicted RBP12.89□□□□□ -0.35
RAB40B-202ENST00000538809 RNF121Q9H920 327 aa12.89□□□□□ -0.35
RAB40B-202ENST00000538809 MYOZ1Q9NP98 299 aaPredicted RBP12.89□□□□□ -0.35
RAB40B-202ENST00000538809 DCAF13Q9NV06 445 aaKnown RBP12.89□□□□□ -0.35
RAB40B-202ENST00000538809 ARL8BQ9NVJ2 186 aa12.89□□□□□ -0.35
RAB40B-202ENST00000538809 MYEF2Q9P2K5 600 aaKnown RBP12.89□□□□□ -0.35
RAB40B-202ENST00000538809 EGFL7Q9UHF1 273 aa12.89□□□□□ -0.35
RAB40B-202ENST00000538809 ARL2BPQ9Y2Y0 163 aa12.89□□□□□ -0.35
RAB40B-202ENST00000538809 ENPP4Q9Y6X5 453 aa12.89□□□□□ -0.35
RAB40B-202ENST00000538809 IGKV1D-43A0A0B4J1Z2 117 aa12.88□□□□□ -0.35
RAB40B-202ENST00000538809 LOC390937A0A1W2PQ73 354 aa12.88□□□□□ -0.35
RAB40B-202ENST00000538809 NDUFS8O00217 210 aa12.88□□□□□ -0.35
RAB40B-202ENST00000538809 SERPINA5P05154 406 aa12.88□□□□□ -0.35
RAB40B-202ENST00000538809 ERCC1P07992 297 aaPredicted RBP12.88□□□□□ -0.35
RAB40B-202ENST00000538809 CCL2P13500 99 aa12.88□□□□□ -0.35
RAB40B-202ENST00000538809 HSD17B1P14061 328 aa12.88□□□□□ -0.35
RAB40B-202ENST00000538809 DAOP14920 347 aa12.88□□□□□ -0.35
RAB40B-202ENST00000538809 CDAP32320 146 aa12.88□□□□□ -0.35
RAB40B-202ENST00000538809 IFNA8P32881 189 aa12.88□□□□□ -0.35
RAB40B-202ENST00000538809 GLRXP35754 106 aa12.88□□□□□ -0.35
RAB40B-202ENST00000538809 ALDH3B1P43353 468 aa12.88□□□□□ -0.35
RAB40B-202ENST00000538809 MAD2L1BPQ15013 274 aaPredicted RBP12.88□□□□□ -0.35
RAB40B-202ENST00000538809 NRN1LQ496H8 165 aa12.88□□□□□ -0.35
RAB40B-202ENST00000538809 IQCCQ4KMZ1 466 aa12.88□□□□□ -0.35
RAB40B-202ENST00000538809 C10orf128Q5T292 105 aa12.88□□□□□ -0.35
RAB40B-202ENST00000538809 GLYATQ6IB77 296 aa12.88□□□□□ -0.35
RAB40B-202ENST00000538809 TMEM53Q6P2H8 277 aa12.88□□□□□ -0.35
RAB40B-202ENST00000538809 FKBP9P1Q75LS8 142 aa12.88□□□□□ -0.35
RAB40B-202ENST00000538809 SLC16A14Q7RTX9 510 aa12.88□□□□□ -0.35
RAB40B-202ENST00000538809 HDDC2Q7Z4H3 204 aa12.88□□□□□ -0.35
RAB40B-202ENST00000538809 LRP11Q86VZ4 500 aa12.88□□□□□ -0.35
RAB40B-202ENST00000538809 HIPK1Q86Z02 1210 aa12.88□□□□□ -0.35
RAB40B-202ENST00000538809 RNF113BQ8IZP6 322 aaKnown RBP12.88□□□□□ -0.35
RAB40B-202ENST00000538809 LRRC18Q8N456 261 aa12.88□□□□□ -0.35
RAB40B-202ENST00000538809 FAM86B1Q8N7N1 296 aa12.88□□□□□ -0.35
RAB40B-202ENST00000538809 SLC30A7Q8NEW0 376 aa12.88□□□□□ -0.35
RAB40B-202ENST00000538809 HDAC2Q92769 488 aaKnown RBP12.88□□□□□ -0.35
RAB40B-202ENST00000538809 C7orf34Q96L11 122 aa12.88□□□□□ -0.35
RAB40B-202ENST00000538809 KCNK17Q96T54 332 aa12.88□□□□□ -0.35
RAB40B-202ENST00000538809 TXNIPQ9H3M7 391 aa12.88□□□□□ -0.35
RAB40B-202ENST00000538809 ANKRD19PQ9H560 264 aa12.88□□□□□ -0.35
RAB40B-202ENST00000538809 CD300AQ9UGN4 299 aa12.88□□□□□ -0.35
RAB40B-202ENST00000538809 SLC7A8Q9UHI5 535 aa12.88□□□□□ -0.35
RAB40B-202ENST00000538809 RPS6KA6Q9UK32 745 aa12.88□□□□□ -0.35
RAB40B-202ENST00000538809 FBXL3Q9UKT7 428 aa12.88□□□□□ -0.35
RAB40B-202ENST00000538809 SPEF1Q9Y4P9 236 aa12.88□□□□□ -0.35
RAB40B-202ENST00000538809 TANC2Q9HCD6 1990 aa12.87□□□□□ -0.35
RAB40B-202ENST00000538809 TRAV27A0A087WT01 109 aa12.87□□□□□ -0.35
RAB40B-202ENST00000538809 LYNX1G3V0Z9 82 aa12.87□□□□□ -0.35
RAB40B-202ENST00000538809 M0R233 179 aa12.87□□□□□ -0.35
RAB40B-202ENST00000538809 ENTPD5O75356 428 aa12.87□□□□□ -0.35
RAB40B-202ENST00000538809 STAMBPO95630 424 aa12.87□□□□□ -0.35
RAB40B-202ENST00000538809 SEMG1P04279 462 aa12.87□□□□□ -0.35
RAB40B-202ENST00000538809 FAM157BP0CG42 384 aa12.87□□□□□ -0.35
RAB40B-202ENST00000538809 LYNX1P0DP58 116 aa12.87□□□□□ -0.35
RAB40B-202ENST00000538809 SAGP10523 405 aaPredicted RBP12.87□□□□□ -0.35
RAB40B-202ENST00000538809 APEHP13798 732 aaKnown RBP12.87□□□□□ -0.35
RAB40B-202ENST00000538809 RPS23P62266 143 aaKnown RBP12.87□□□□□ -0.35
RAB40B-202ENST00000538809 CD47Q08722 323 aa12.87□□□□□ -0.35
RAB40B-202ENST00000538809 TAF11Q15544 211 aa12.87□□□□□ -0.35
RAB40B-202ENST00000538809 CHRFAM7AQ494W8 412 aa12.87□□□□□ -0.35
RAB40B-202ENST00000538809 ALG10Q5BKT4 473 aa12.87□□□□□ -0.35
RAB40B-202ENST00000538809 CYB5R2Q6BCY4 276 aa12.87□□□□□ -0.35
RAB40B-202ENST00000538809 TBPL2Q6SJ96 375 aa12.87□□□□□ -0.35
RAB40B-202ENST00000538809 MBOAT2Q6ZWT7 520 aa12.87□□□□□ -0.35
RAB40B-202ENST00000538809 PGAM4Q8N0Y7 254 aa12.87□□□□□ -0.35
RAB40B-202ENST00000538809 RNF148Q8N7C7 305 aa12.87□□□□□ -0.35
RAB40B-202ENST00000538809 CLDN22Q8N7P3 220 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms