RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 UNKLQ9H9P5 680 aaKnown RBP6.09□□□□□ -1.43
USP28-207ENST00000538475 TRPV4Q9HBA0 871 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 SIDT1Q9NXL6 827 aaKnown RBP6.09□□□□□ -1.43
USP28-207ENST00000538475 CNIH4Q9P003 139 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 TRPC4Q9UBN4 977 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 STEAP1Q9UHE8 339 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 CPA4Q9UI42 421 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 RPH3AQ9Y2J0 694 aaPredicted RBP6.09□□□□□ -1.43
USP28-207ENST00000538475 AK6Q9Y3D8 172 aaKnown RBP6.09□□□□□ -1.43
USP28-207ENST00000538475 COL4A6Q14031 1691 aa6.09□□□□□ -1.43
USP28-207ENST00000538475 KIF26BQ2KJY2 2108 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 THSD7BQ9C0I4 1608 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 TRBV5-5A0A0J9YX44 114 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 TMEM72A0PK05 275 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 LRIT2A6NDA9 550 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 TBC1D3BA6NDS4 549 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 AGRPO00253 132 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 ZNF208O43345 1280 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 FADS1O60427 444 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 B4GALT2O60909 372 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 SCGNO76038 276 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 STC2O76061 302 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 C1orf105O95561 183 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 POP4O95707 220 aaKnown RBP6.08□□□□□ -1.44
USP28-207ENST00000538475 AIFM1O95831 613 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 CH25HO95992 272 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 PLGP00747 810 aaPredicted RBP6.08□□□□□ -1.44
USP28-207ENST00000538475 GAPDHP04406 335 aaKnown RBP6.08□□□□□ -1.44
USP28-207ENST00000538475 ANXA2P07355 339 aaKnown RBP6.08□□□□□ -1.44
USP28-207ENST00000538475 CHRM4P08173 479 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 FCGR3AP08637 254 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 OR8U8P0C7N1 319 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 APEHP13798 732 aaKnown RBP6.08□□□□□ -1.44
USP28-207ENST00000538475 GTF2F2P13984 249 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 MUC1P15941 1255 aaPredicted RBP6.08□□□□□ -1.44
USP28-207ENST00000538475 TBXA2RP21731 343 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 EDNRAP25101 427 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 TEAD1P28347 426 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 TACR3P29371 465 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 IGFALSP35858 605 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 PPM1FP49593 454 aaPredicted RBP6.08□□□□□ -1.44
USP28-207ENST00000538475 SULT1A2P50226 295 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 TBPL1P62380 186 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 LTBQ06643 244 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 RAB33AQ14088 237 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 ERV3-1Q14264 604 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 CEBPEQ15744 281 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 PRSS53Q2L4Q9 553 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 C2orf68Q2NKX9 166 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 Q499Y3 187 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 ACER2Q5QJU3 275 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 NSUN5P2Q63ZY6 315 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 TBC1D3GQ6DHY5 549 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 GDPD4Q6W3E5 623 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 STAC2Q6ZMT1 411 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 ANKRD33Q7Z3H0 272 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 LSRQ86X29 649 aaPredicted RBP6.08□□□□□ -1.44
USP28-207ENST00000538475 C7orf61Q8IZ16 206 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 NRSN1Q8IZ57 195 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 OR2L13Q8N349 312 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 ACOT4Q8N9L9 421 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 KREMEN2Q8NCW0 462 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 KLHDC9Q8NEP7 349 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 OR56B1Q8NGI3 324 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 OR52B4Q8NGK2 314 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 OR4A4PQ8NGN8 299 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 OR6X1Q8NH79 312 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 OR5R1Q8NH85 324 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 LINC01599Q8WXQ3 324 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 C3orf49Q96BT1 292 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 FOXRED1Q96CU9 486 aaPredicted RBP6.08□□□□□ -1.44
USP28-207ENST00000538475 MRPL38Q96DV4 380 aaKnown RBP6.08□□□□□ -1.44
USP28-207ENST00000538475 C14orf79Q96F83 325 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 MRGPRX3Q96LB0 322 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 NOL4LQ96MY1 436 aaPredicted RBP6.08□□□□□ -1.44
USP28-207ENST00000538475 AMDHD1Q96NU7 426 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 PRAP1Q96NZ9 151 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 AQP10Q96PS8 301 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 NEU1Q99519 415 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 SSX3Q99909 188 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 PAAF1Q9BRP4 392 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 KRTAP4-7Q9BYR0 210 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 CHST5Q9GZS9 411 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 WDR13Q9H1Z4 485 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 DPEP2Q9H4A9 486 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 NOX4Q9NPH5 578 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 PRSS16Q9NQE7 514 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 C19orf12Q9NSK7 152 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 ZCCHC3Q9NUD5 404 aaKnown RBP6.08□□□□□ -1.44
USP28-207ENST00000538475 TDP1Q9NUW8 608 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 MARCH5Q9NX47 278 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 SAGE1Q9NXZ1 904 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 GAR1Q9NY12 217 aaKnown RBP6.08□□□□□ -1.44
USP28-207ENST00000538475 MRPL15Q9P015 296 aaKnown RBP6.08□□□□□ -1.44
USP28-207ENST00000538475 CACFD1Q9UGQ2 172 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 KCNE5Q9UJ90 142 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 KCNIP3Q9Y2W7 256 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 FLVCR1Q9Y5Y0 555 aa6.08□□□□□ -1.44
USP28-207ENST00000538475 TRBV5-7A0A0A0MS05 114 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms