RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 GLYATL3Q5SZD4 288 aa15.44■□□□□ 0.06
SCARB1-205ENST00000538291 FAM3DQ96BQ1 224 aa15.44■□□□□ 0.06
SCARB1-205ENST00000538291 FAM212BQ9NTI7 297 aaPredicted RBP15.44■□□□□ 0.06
SCARB1-205ENST00000538291 ASIC5Q9NY37 505 aa15.44■□□□□ 0.06
SCARB1-205ENST00000538291 OR51B4Q9Y5P0 310 aa15.44■□□□□ 0.06
SCARB1-205ENST00000538291 SNRNP70P08621 437 aaKnown RBP15.43■□□□□ 0.06
SCARB1-205ENST00000538291 SLC19A1P41440 591 aa15.43■□□□□ 0.06
SCARB1-205ENST00000538291 DOK3Q7L591 496 aa15.43■□□□□ 0.06
SCARB1-205ENST00000538291 PSD2Q9BQI7 771 aa15.43■□□□□ 0.06
SCARB1-205ENST00000538291 AMBRA1Q9C0C7 1298 aa15.43■□□□□ 0.06
SCARB1-205ENST00000538291 C20orf27Q9GZN8 174 aa15.43■□□□□ 0.06
SCARB1-205ENST00000538291 MYH8P13535 1937 aa15.43■□□□□ 0.06
SCARB1-205ENST00000538291 M0R082 166 aa15.43■□□□□ 0.06
SCARB1-205ENST00000538291 ITGBL1O95965 494 aaPredicted RBP15.43■□□□□ 0.06
SCARB1-205ENST00000538291 PPIAP62937 165 aaKnown RBP15.43■□□□□ 0.06
SCARB1-205ENST00000538291 TLE4Q04727 773 aa15.43■□□□□ 0.06
SCARB1-205ENST00000538291 MORN4Q8NDC4 146 aa15.43■□□□□ 0.06
SCARB1-205ENST00000538291 KLK4Q9Y5K2 254 aa15.43■□□□□ 0.06
SCARB1-205ENST00000538291 HRH3Q9Y5N1 445 aa15.43■□□□□ 0.06
SCARB1-205ENST00000538291 MYH3P11055 1940 aa15.43■□□□□ 0.06
SCARB1-205ENST00000538291 LOC100289279A0A1B0GTE1 492 aa15.43■□□□□ 0.06
SCARB1-205ENST00000538291 TNFSF15O95150 251 aa15.43■□□□□ 0.06
SCARB1-205ENST00000538291 FABP1P07148 127 aa15.43■□□□□ 0.06
SCARB1-205ENST00000538291 RAD52P43351 418 aa15.43■□□□□ 0.06
SCARB1-205ENST00000538291 TEKQ02763 1124 aa15.43■□□□□ 0.06
SCARB1-205ENST00000538291 OGFOD3Q6PK18 319 aa15.43■□□□□ 0.06
SCARB1-205ENST00000538291 ZFP82Q8N141 532 aa15.43■□□□□ 0.06
SCARB1-205ENST00000538291 OR51A2Q8NGJ7 313 aa15.43■□□□□ 0.06
SCARB1-205ENST00000538291 BAHD1Q8TBE0 780 aaPredicted RBP15.43■□□□□ 0.06
SCARB1-205ENST00000538291 BCO1Q9HAY6 547 aa15.43■□□□□ 0.06
SCARB1-205ENST00000538291 GALNT9Q9HCQ5 603 aa15.43■□□□□ 0.06
SCARB1-205ENST00000538291 SLC39A9Q9NUM3 307 aa15.43■□□□□ 0.06
SCARB1-205ENST00000538291 ZNF225Q9UK10 706 aa15.43■□□□□ 0.06
SCARB1-205ENST00000538291 SNAPINO95295 136 aa15.43■□□□□ 0.06
SCARB1-205ENST00000538291 ZIC2O95409 532 aaPredicted RBP15.43■□□□□ 0.06
SCARB1-205ENST00000538291 NPBWR1P48145 328 aa15.43■□□□□ 0.06
SCARB1-205ENST00000538291 HSF1Q00613 529 aa15.43■□□□□ 0.06
SCARB1-205ENST00000538291 MC2RQ01718 297 aa15.43■□□□□ 0.06
SCARB1-205ENST00000538291 NAA40Q86UY6 237 aa15.43■□□□□ 0.06
SCARB1-205ENST00000538291 CLDN22Q8N7P3 220 aa15.43■□□□□ 0.06
SCARB1-205ENST00000538291 PLPP5Q8NEB5 264 aa15.43■□□□□ 0.06
SCARB1-205ENST00000538291 GATA6Q92908 595 aa15.43■□□□□ 0.06
SCARB1-205ENST00000538291 TMEM43Q9BTV4 400 aa15.43■□□□□ 0.06
SCARB1-205ENST00000538291 FAM117AQ9C073 453 aa15.43■□□□□ 0.06
SCARB1-205ENST00000538291 PLEKHF2Q9H8W4 249 aa15.43■□□□□ 0.06
SCARB1-205ENST00000538291 TIMM10BQ9Y5J6 103 aa15.43■□□□□ 0.06
SCARB1-205ENST00000538291 OR6C65A6NJZ3 312 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 H0YIG0 161 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 PRPH2P23942 346 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 RAB13P51153 203 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 CPEB2Q7Z5Q1 589 aaKnown RBP15.42■□□□□ 0.06
SCARB1-205ENST00000538291 KDM8Q8N371 416 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 BSCL2Q96G97 398 aaPredicted RBP15.42■□□□□ 0.06
SCARB1-205ENST00000538291 KCNJ15Q99712 375 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 EDEM2Q9BV94 578 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 SPACA1Q9HBV2 294 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 NDRG3Q9UGV2 375 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 MYH7P12883 1935 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 AGAP14A8MT82 685 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 RPL11P62913 178 aaKnown RBP15.42■□□□□ 0.06
SCARB1-205ENST00000538291 RAC1P63000 192 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 FXNQ16595 210 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 OR52N1Q8NH53 320 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 RHOXF1Q8NHV9 184 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 PATE1Q8WXA2 126 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 MRGPRX1Q96LB2 322 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 CRLF2Q9HC73 371 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 TUBG2Q9NRH3 451 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 KIR2DS1A0A191URI9 304 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 A0A1W2PPC4 97 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 SELENOFO60613 162 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 CRYAAP02489 173 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 NID1P14543 1247 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 TMEM11P17152 192 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 POLR2IP36954 125 aaKnown RBP15.42■□□□□ 0.06
SCARB1-205ENST00000538291 KIR2DS4P43632 304 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 SELENBP1Q13228 472 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 KIR2DS1Q14954 304 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 DEFB109BQ30KR1 87 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 STEAP1BQ6NZ63 245 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 CAMKMTQ7Z624 323 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 OR5AS1Q8N127 324 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 CMTM2Q8TAZ6 248 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 TRIB1Q96RU8 372 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 C1QTNF6Q9BXI9 259 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 SLC16A6O15403 523 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 CAPZBP47756 277 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 AGFG1P52594 562 aaKnown RBP15.42■□□□□ 0.06
SCARB1-205ENST00000538291 MYBPHQ13203 477 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 VWA2Q5GFL6 755 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 OLIG3Q7RTU3 272 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 OVCH1Q7RTY7 1134 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 PRR14Q9BWN1 585 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 GPATCH2Q9NW75 528 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 IHHQ14623 411 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 PRTGQ2VWP7 1150 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 ARHGAP11BQ3KRB8 267 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 ANGPTL5Q86XS5 388 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 LINC01465Q8N7H1 131 aa15.42■□□□□ 0.06
SCARB1-205ENST00000538291 MAFAQ8NHW3 353 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms