RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 PRDX6P30041 224 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 GIPRP48546 466 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 IDH2P48735 452 aaKnown RBP7.66□□□□□ -1.18
USP28-205ENST00000537706 MNAT1P51948 309 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 SLC35A2P78381 396 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 RAB39AQ14964 217 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 CLEC6AQ6EIG7 209 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 NLRC3Q7RTR2 1065 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 NDUFA11Q86Y39 141 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 ZNF483Q8TF39 744 aaPredicted RBP7.66□□□□□ -1.18
USP28-205ENST00000537706 CIDECQ96AQ7 238 aaPredicted RBP7.66□□□□□ -1.18
USP28-205ENST00000537706 RBMXL1Q96E39 390 aaKnown RBP7.66□□□□□ -1.18
USP28-205ENST00000537706 ZNF764Q96H86 408 aaPredicted RBP7.66□□□□□ -1.18
USP28-205ENST00000537706 TSPAN32Q96QS1 320 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 MMP28Q9H239 520 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 C1orf21Q9H246 121 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 TCF7L2Q9NQB0 619 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 TAS2R1Q9NYW7 299 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 SH3BP4Q9P0V3 963 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 ZMAT5Q9UDW3 170 aaKnown RBP7.66□□□□□ -1.18
USP28-205ENST00000537706 CGGBP1Q9UFW8 167 aaPredicted RBP7.66□□□□□ -1.18
USP28-205ENST00000537706 MIOXQ9UGB7 285 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 RPUSD1Q9UJJ7 312 aaKnown RBP7.66□□□□□ -1.18
USP28-205ENST00000537706 VPREB3Q9UKI3 123 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 ZDHHC8Q9ULC8 765 aa7.66□□□□□ -1.18
USP28-205ENST00000537706 POLR3HQ9Y535 204 aaPredicted RBP7.66□□□□□ -1.18
USP28-205ENST00000537706 A8MT66 165 aa7.65□□□□□ -1.18
USP28-205ENST00000537706 SLC22A2O15244 555 aa7.65□□□□□ -1.18
USP28-205ENST00000537706 PEX11AO75192 247 aa7.65□□□□□ -1.18
USP28-205ENST00000537706 STX11O75558 287 aa7.65□□□□□ -1.18
USP28-205ENST00000537706 IGHV3-13P01766 116 aa7.65□□□□□ -1.18
USP28-205ENST00000537706 RPS17P08708 135 aaKnown RBP7.65□□□□□ -1.18
USP28-205ENST00000537706 TNFRSF1AP19438 455 aa7.65□□□□□ -1.18
USP28-205ENST00000537706 CXCR1P25024 350 aa7.65□□□□□ -1.18
USP28-205ENST00000537706 CDH13P55290 713 aa7.65□□□□□ -1.18
USP28-205ENST00000537706 C1DQ13901 141 aaKnown RBP7.65□□□□□ -1.18
USP28-205ENST00000537706 ARHGAP11BQ3KRB8 267 aa7.65□□□□□ -1.18
USP28-205ENST00000537706 UNQ6126/PRO20091Q6UXV3 157 aa7.65□□□□□ -1.18
USP28-205ENST00000537706 GPRIN3Q6ZVF9 776 aa7.65□□□□□ -1.18
USP28-205ENST00000537706 RNF130Q86XS8 419 aa7.65□□□□□ -1.18
USP28-205ENST00000537706 KLHDC1Q8N7A1 406 aa7.65□□□□□ -1.18
USP28-205ENST00000537706 FAM120BQ96EK7 910 aaKnown RBP7.65□□□□□ -1.18
USP28-205ENST00000537706 PCGF1Q9BSM1 259 aa7.65□□□□□ -1.18
USP28-205ENST00000537706 CCDC28BQ9BUN5 200 aa7.65□□□□□ -1.18
USP28-205ENST00000537706 RNF121Q9H920 327 aa7.65□□□□□ -1.18
USP28-205ENST00000537706 ADPRHL2Q9NX46 363 aa7.65□□□□□ -1.18
USP28-205ENST00000537706 TRPC5OSA6NMA1 111 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 B2RBV5 119 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 ENSAO43768 121 aaKnown RBP7.64□□□□□ -1.19
USP28-205ENST00000537706 FBXO24O75426 580 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 SERPINA5P05154 406 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 MSX2P35548 267 aaPredicted RBP7.64□□□□□ -1.19
USP28-205ENST00000537706 PMS2P3Q13401 168 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 TBC1D28Q2M2D7 210 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 FRMD7Q6ZUT3 714 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 EPHX4Q8IUS5 362 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 CCNYL1Q8N7R7 359 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 RBM15BQ8NDT2 890 aaKnown RBP7.64□□□□□ -1.19
USP28-205ENST00000537706 SLC30A7Q8NEW0 376 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 OR8B3Q8NGG8 313 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 OR4C13Q8NGP0 309 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 OR2T6Q8NHC8 308 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 CMTM5Q96DZ9 223 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 L3HYPDHQ96EM0 354 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 RCC1LQ96I51 464 aaKnown RBP7.64□□□□□ -1.19
USP28-205ENST00000537706 OR8B2Q96RD0 313 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 OR51B6Q9H340 312 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 RNPEPL1Q9HAU8 725 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 EXOSC3Q9NQT5 275 aaKnown RBP7.64□□□□□ -1.19
USP28-205ENST00000537706 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.64□□□□□ -1.19
USP28-205ENST00000537706 OSGIN1Q9UJX0 560 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 FOXJ3Q9UPW0 622 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 DUXAA6NLW8 204 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 CEACAM18A8MTB9 384 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 E9PBE3 544 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 TBX19O60806 448 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 IFNW1P05000 195 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 WNT2P09544 360 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 TACR3P29371 465 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 PGM1P36871 562 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 TNFAIP6P98066 277 aaPredicted RBP7.64□□□□□ -1.19
USP28-205ENST00000537706 PAX2Q02962 417 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 CLCQ05315 142 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 ZNF718Q3SXZ3 478 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 COX20Q5RI15 118 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 SLC35E4Q6ICL7 350 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 TMEM53Q6P2H8 277 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 LYG1Q8N1E2 194 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 OR5R1Q8NH85 324 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 AGR3Q8TD06 166 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 MOAP1Q96BY2 351 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 NEIL1Q96FI4 390 aaPredicted RBP7.64□□□□□ -1.19
USP28-205ENST00000537706 SDF2Q99470 211 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 REEP4Q9H6H4 257 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 MRGBPQ9NV56 204 aa7.64□□□□□ -1.19
USP28-205ENST00000537706 NOP53Q9NZM5 478 aaKnown RBP7.64□□□□□ -1.19
USP28-205ENST00000537706 SERTM1A2A2V5 107 aa7.63□□□□□ -1.19
USP28-205ENST00000537706 IFNL4K9M1U5 179 aa7.63□□□□□ -1.19
USP28-205ENST00000537706 M0R3G1 203 aa7.63□□□□□ -1.19
USP28-205ENST00000537706 TOX4O94842 621 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms