RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 DNTTIP1Q9H147 329 aa3.65□□□□□ -1.83
PRKDC-208ENST00000536710 ZNF226Q9NYT6 803 aa3.65□□□□□ -1.83
PRKDC-208ENST00000536710 TP53TG5Q9Y2B4 290 aa3.65□□□□□ -1.83
PRKDC-208ENST00000536710 CAB39Q9Y376 341 aaPredicted RBP3.65□□□□□ -1.83
PRKDC-208ENST00000536710 PHF3Q92576 2039 aaKnown RBP3.65□□□□□ -1.83
PRKDC-208ENST00000536710 TP53BP1Q12888 1972 aaPredicted RBP3.64□□□□□ -1.83
PRKDC-208ENST00000536710 GLYATL1P3A0A0U1RQE8 302 aa3.64□□□□□ -1.83
PRKDC-208ENST00000536710 SIRPB1O00241 398 aa3.64□□□□□ -1.83
PRKDC-208ENST00000536710 LAD1O00515 517 aa3.64□□□□□ -1.83
PRKDC-208ENST00000536710 CASQ2O14958 399 aaPredicted RBP3.64□□□□□ -1.83
PRKDC-208ENST00000536710 KMOO15229 486 aa3.64□□□□□ -1.83
PRKDC-208ENST00000536710 SUPT3HO75486 399 aa3.64□□□□□ -1.83
PRKDC-208ENST00000536710 CLPXO76031 633 aa3.64□□□□□ -1.83
PRKDC-208ENST00000536710 SERPINA5P05154 406 aa3.64□□□□□ -1.83
PRKDC-208ENST00000536710 FGF4P08620 206 aa3.64□□□□□ -1.83
PRKDC-208ENST00000536710 ACSM4P0C7M7 580 aa3.64□□□□□ -1.83
PRKDC-208ENST00000536710 IGHV3-43DP0DP04 118 aa3.64□□□□□ -1.83
PRKDC-208ENST00000536710 FOLR1P15328 257 aa3.64□□□□□ -1.83
PRKDC-208ENST00000536710 ZNF250P15622 560 aa3.64□□□□□ -1.83
PRKDC-208ENST00000536710 ZNF30P17039 623 aa3.64□□□□□ -1.83
PRKDC-208ENST00000536710 RPS10P46783 165 aaKnown RBP3.64□□□□□ -1.83
PRKDC-208ENST00000536710 NMUP48645 174 aa3.64□□□□□ -1.83
PRKDC-208ENST00000536710 KRTAP10-7P60409 375 aaPredicted RBP3.64□□□□□ -1.83
PRKDC-208ENST00000536710 ADARB1P78563 741 aaKnown RBP3.64□□□□□ -1.83
PRKDC-208ENST00000536710 SELENBP1Q13228 472 aa3.64□□□□□ -1.83
PRKDC-208ENST00000536710 IL18Q14116 193 aa3.64□□□□□ -1.83
PRKDC-208ENST00000536710 MPPED2Q15777 294 aa3.64□□□□□ -1.83
PRKDC-208ENST00000536710 ZSCAN26Q16670 478 aa3.64□□□□□ -1.83
PRKDC-208ENST00000536710 KCTD19Q17RG1 926 aaPredicted RBP3.64□□□□□ -1.83
PRKDC-208ENST00000536710 VAX1Q5SQQ9 334 aa3.64□□□□□ -1.83
PRKDC-208ENST00000536710 C1orf185Q5T7R7 199 aa3.64□□□□□ -1.83
PRKDC-208ENST00000536710 H2AFVQ71UI9 128 aa3.64□□□□□ -1.83
PRKDC-208ENST00000536710 C6orf120Q7Z4R8 191 aa3.64□□□□□ -1.83
PRKDC-208ENST00000536710 SH2D6Q7Z4S9 175 aa3.64□□□□□ -1.83
PRKDC-208ENST00000536710 OAFQ86UD1 273 aa3.64□□□□□ -1.83
PRKDC-208ENST00000536710 ZNF429Q86V71 674 aa3.64□□□□□ -1.83
PRKDC-208ENST00000536710 OFCC1Q8IZS5 231 aa3.64□□□□□ -1.83
PRKDC-208ENST00000536710 OR10R2Q8NGX6 335 aa3.64□□□□□ -1.83
PRKDC-208ENST00000536710 GSDMAQ96QA5 445 aa3.64□□□□□ -1.83
PRKDC-208ENST00000536710 MTG1Q9BT17 334 aaPredicted RBP3.64□□□□□ -1.83
PRKDC-208ENST00000536710 NYAP2Q9P242 653 aa3.64□□□□□ -1.83
PRKDC-208ENST00000536710 NFASCO94856 1347 aa3.64□□□□□ -1.83
PRKDC-208ENST00000536710 PINLYPA6NC86 204 aa3.63□□□□□ -1.83
PRKDC-208ENST00000536710 LRRIQ4A6NIV6 560 aa3.63□□□□□ -1.83
PRKDC-208ENST00000536710 PANO1I0J062 215 aa3.63□□□□□ -1.83
PRKDC-208ENST00000536710 MRPS12O15235 138 aaKnown RBP3.63□□□□□ -1.83
PRKDC-208ENST00000536710 CACNG3O60359 315 aa3.63□□□□□ -1.83
PRKDC-208ENST00000536710 AIFM1O95831 613 aa3.63□□□□□ -1.83
PRKDC-208ENST00000536710 SLC25A27O95847 323 aa3.63□□□□□ -1.83
PRKDC-208ENST00000536710 MYL2P10916 166 aa3.63□□□□□ -1.83
PRKDC-208ENST00000536710 SFTPCP11686 197 aa3.63□□□□□ -1.83
PRKDC-208ENST00000536710 NR2C1P13056 603 aa3.63□□□□□ -1.83
PRKDC-208ENST00000536710 DCKP27707 260 aa3.63□□□□□ -1.83
PRKDC-208ENST00000536710 UQCRFS1P47985 274 aa3.63□□□□□ -1.83
PRKDC-208ENST00000536710 CX3CR1P49238 355 aa3.63□□□□□ -1.83
PRKDC-208ENST00000536710 NCBP2P52298 156 aaKnown RBP eCLIP3.63□□□□□ -1.83
PRKDC-208ENST00000536710 KRTAP10-5P60370 271 aa3.63□□□□□ -1.83
PRKDC-208ENST00000536710 LIPEQ05469 1076 aa3.63□□□□□ -1.83
PRKDC-208ENST00000536710 TMEM183BQ1AE95 376 aa3.63□□□□□ -1.83
PRKDC-208ENST00000536710 CCNJQ5T5M9 372 aa3.63□□□□□ -1.83
PRKDC-208ENST00000536710 TWF2Q6IBS0 349 aaKnown RBP3.63□□□□□ -1.83
PRKDC-208ENST00000536710 CERS6Q6ZMG9 384 aa3.63□□□□□ -1.83
PRKDC-208ENST00000536710 BIVMQ86UB2 503 aa3.63□□□□□ -1.83
PRKDC-208ENST00000536710 TMEM183AQ8IXX5 376 aa3.63□□□□□ -1.83
PRKDC-208ENST00000536710 MKXQ8IYA7 352 aa3.63□□□□□ -1.83
PRKDC-208ENST00000536710 CMTM1Q8IZ96 169 aa3.63□□□□□ -1.83
PRKDC-208ENST00000536710 IQCKQ8N0W5 287 aa3.63□□□□□ -1.83
PRKDC-208ENST00000536710 ARIH2OSQ8N7S6 290 aa3.63□□□□□ -1.83
PRKDC-208ENST00000536710 AGR3Q8TD06 166 aa3.63□□□□□ -1.83
PRKDC-208ENST00000536710 ACTRT1Q8TDG2 376 aa3.63□□□□□ -1.83
PRKDC-208ENST00000536710 CAPSLQ8WWF8 208 aa3.63□□□□□ -1.83
PRKDC-208ENST00000536710 FAM3DQ96BQ1 224 aa3.63□□□□□ -1.83
PRKDC-208ENST00000536710 ECHDC3Q96DC8 303 aa3.63□□□□□ -1.83
PRKDC-208ENST00000536710 RNF185Q96GF1 192 aa3.63□□□□□ -1.83
PRKDC-208ENST00000536710 PRRC1Q96M27 445 aa3.63□□□□□ -1.83
PRKDC-208ENST00000536710 SERPINB12Q96P63 405 aa3.63□□□□□ -1.83
PRKDC-208ENST00000536710 TSSK3Q96PN8 268 aa3.63□□□□□ -1.83
PRKDC-208ENST00000536710 GPATCH2LQ9NWQ4 482 aa3.63□□□□□ -1.83
PRKDC-208ENST00000536710 HRASLS2Q9NWW9 162 aa3.63□□□□□ -1.83
PRKDC-208ENST00000536710 LYARQ9NX58 379 aaKnown RBP3.63□□□□□ -1.83
PRKDC-208ENST00000536710 ANAPC11Q9NYG5 84 aa3.63□□□□□ -1.83
PRKDC-208ENST00000536710 F11RQ9Y624 299 aaKnown RBP3.63□□□□□ -1.83
PRKDC-208ENST00000536710 ADAMTS9Q9P2N4 1935 aa3.63□□□□□ -1.83
PRKDC-208ENST00000536710 CEMIPQ8WUJ3 1361 aa3.63□□□□□ -1.83
PRKDC-208ENST00000536710 TRBV6-6A0A0A6YYG2 114 aa3.62□□□□□ -1.83
PRKDC-208ENST00000536710 WI2-2373I1.2A0A1W2PRP0 233 aa3.62□□□□□ -1.83
PRKDC-208ENST00000536710 FAM166BA8MTA8 275 aa3.62□□□□□ -1.83
PRKDC-208ENST00000536710 TEX46H3BTG2 121 aa3.62□□□□□ -1.83
PRKDC-208ENST00000536710 DPM1O60762 260 aa3.62□□□□□ -1.83
PRKDC-208ENST00000536710 HUS1O60921 280 aa3.62□□□□□ -1.83
PRKDC-208ENST00000536710 CA11O75493 328 aa3.62□□□□□ -1.83
PRKDC-208ENST00000536710 OR2F2O95006 317 aa3.62□□□□□ -1.83
PRKDC-208ENST00000536710 BGLAPP02818 100 aa3.62□□□□□ -1.83
PRKDC-208ENST00000536710 PCCAP05165 728 aaPredicted RBP3.62□□□□□ -1.83
PRKDC-208ENST00000536710 ERCC1P07992 297 aaPredicted RBP3.62□□□□□ -1.83
PRKDC-208ENST00000536710 HMOX2P30519 316 aa3.62□□□□□ -1.83
PRKDC-208ENST00000536710 LHX2P50458 406 aa3.62□□□□□ -1.83
PRKDC-208ENST00000536710 CCR6P51684 374 aa3.62□□□□□ -1.83
PRKDC-208ENST00000536710 EIF3EP60228 445 aaKnown RBP3.62□□□□□ -1.83
PRKDC-208ENST00000536710 CYB5R2Q6BCY4 276 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms