RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 ETFDHQ16134 617 aa12.33□□□□□ -0.44
UBE3B-206ENST00000536398 SAMD4BQ5PRF9 694 aaKnown RBP12.33□□□□□ -0.44
UBE3B-206ENST00000536398 TMPRSS11FQ6ZWK6 438 aa12.33□□□□□ -0.44
UBE3B-206ENST00000536398 ZCCHC24Q8N2G6 241 aaKnown RBP12.33□□□□□ -0.44
UBE3B-206ENST00000536398 LRRC18Q8N456 261 aa12.33□□□□□ -0.44
UBE3B-206ENST00000536398 PAQR4Q8N4S7 273 aaPredicted RBP12.33□□□□□ -0.44
UBE3B-206ENST00000536398 ZNF525Q8N782 197 aa12.33□□□□□ -0.44
UBE3B-206ENST00000536398 NANOS1Q8WY41 292 aaKnown RBP12.33□□□□□ -0.44
UBE3B-206ENST00000536398 PYURFQ96I23 114 aa12.33□□□□□ -0.44
UBE3B-206ENST00000536398 FAM46AQ96IP4 442 aaKnown RBP12.33□□□□□ -0.44
UBE3B-206ENST00000536398 GPA33Q99795 319 aa12.33□□□□□ -0.44
UBE3B-206ENST00000536398 PLK3Q9H4B4 646 aa12.33□□□□□ -0.44
UBE3B-206ENST00000536398 BARX1Q9HBU1 254 aaPredicted RBP12.33□□□□□ -0.44
UBE3B-206ENST00000536398 FAM32AQ9Y421 112 aaKnown RBP12.33□□□□□ -0.44
UBE3B-206ENST00000536398 PMF1-BGLAPU3KQ54 211 aa12.33□□□□□ -0.44
UBE3B-206ENST00000536398 CSPG4Q6UVK1 2322 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 A0A1W2PRQ8 180 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 HTR3EA5X5Y0 456 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 NPIPB13A6NJU9 1138 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 CENPBD1B2RD01 187 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 NPIPB4C9JG80 1138 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 H7C1C5 153 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 PTP4A3O75365 173 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 FAM107AO95990 144 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 IGHMP01871 453 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 T-ENOLP0DO92 83 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 CCL2P13500 99 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 OMPP47874 163 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 LCN6P62502 163 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 KRTAP1-1Q07627 177 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 CD47Q08722 323 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 DAG1Q14118 895 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 DGCR6Q14129 220 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 EFNB3Q15768 340 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 FGD3Q5JSP0 725 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 C10orf128Q5T292 105 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 SLC25A47Q6Q0C1 308 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 C16orf89Q6UX73 402 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 SLC16A14Q7RTX9 510 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 CDK20Q8IZL9 346 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 SVOPLQ8N434 492 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 IL17RDQ8NFM7 739 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 OR10H5Q8NGA6 315 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 ZNF519Q8TB69 540 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 NABP1Q96AH0 204 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 NSL1Q96IY1 281 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 DHRS1Q96LJ7 313 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 SORCS2Q96PQ0 1159 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 DOK1Q99704 481 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 FUZQ9BT04 418 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 ANKRD19PQ9H560 264 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 FAM53CQ9NYF3 392 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 IL20RAQ9UHF4 553 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 MAGEL2Q9UJ55 1249 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 ADAM18Q9Y3Q7 739 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 ARFGEF3Q5TH69 2177 aa12.32□□□□□ -0.44
UBE3B-206ENST00000536398 SH3PXD2BA1X283 911 aa12.31□□□□□ -0.44
UBE3B-206ENST00000536398 B9A039 149 aa12.31□□□□□ -0.44
UBE3B-206ENST00000536398 FARS2O95363 451 aaKnown RBP12.31□□□□□ -0.44
UBE3B-206ENST00000536398 SERPINA5P05154 406 aa12.31□□□□□ -0.44
UBE3B-206ENST00000536398 SCG5P05408 212 aa12.31□□□□□ -0.44
UBE3B-206ENST00000536398 IGFBP1P08833 259 aaPredicted RBP12.31□□□□□ -0.44
UBE3B-206ENST00000536398 NPR2P20594 1047 aa12.31□□□□□ -0.44
UBE3B-206ENST00000536398 RPL4P36578 427 aaKnown RBP12.31□□□□□ -0.44
UBE3B-206ENST00000536398 LIMS1P48059 325 aa12.31□□□□□ -0.44
UBE3B-206ENST00000536398 SLC9A3P48764 834 aa12.31□□□□□ -0.44
UBE3B-206ENST00000536398 ZNF84P51523 738 aa12.31□□□□□ -0.44
UBE3B-206ENST00000536398 EFNA4P52798 201 aa12.31□□□□□ -0.44
UBE3B-206ENST00000536398 SNRPD2P62316 118 aaKnown RBP12.31□□□□□ -0.44
UBE3B-206ENST00000536398 TAF11Q15544 211 aa12.31□□□□□ -0.44
UBE3B-206ENST00000536398 SGCAQ16586 387 aa12.31□□□□□ -0.44
UBE3B-206ENST00000536398 ZBED5Q49AG3 693 aa12.31□□□□□ -0.44
UBE3B-206ENST00000536398 GKAP1Q5VSY0 366 aaPredicted RBP12.31□□□□□ -0.44
UBE3B-206ENST00000536398 CYP2R1Q6VVX0 501 aa12.31□□□□□ -0.44
UBE3B-206ENST00000536398 RINLQ6ZS11 566 aa12.31□□□□□ -0.44
UBE3B-206ENST00000536398 RRM2BQ7LG56 351 aa12.31□□□□□ -0.44
UBE3B-206ENST00000536398 HDDC2Q7Z4H3 204 aa12.31□□□□□ -0.44
UBE3B-206ENST00000536398 CCDC197Q8NCU1 140 aa12.31□□□□□ -0.44
UBE3B-206ENST00000536398 POM121Q96HA1 1249 aa12.31□□□□□ -0.44
UBE3B-206ENST00000536398 Q96M85 177 aa12.31□□□□□ -0.44
UBE3B-206ENST00000536398 NSMCE2Q96MF7 247 aa12.31□□□□□ -0.44
UBE3B-206ENST00000536398 VRK1Q99986 396 aaPredicted RBP12.31□□□□□ -0.44
UBE3B-206ENST00000536398 ALG12Q9BV10 488 aa12.31□□□□□ -0.44
UBE3B-206ENST00000536398 ZNF442Q9H7R0 627 aa12.31□□□□□ -0.44
UBE3B-206ENST00000536398 RNF121Q9H920 327 aa12.31□□□□□ -0.44
UBE3B-206ENST00000536398 FZR1Q9UM11 496 aa12.31□□□□□ -0.44
UBE3B-206ENST00000536398 NIPBLQ6KC79 2804 aaeCLIP12.31□□□□□ -0.44
UBE3B-206ENST00000536398 A0A096LNT2 108 aa12.3□□□□□ -0.44
UBE3B-206ENST00000536398 IMPA2O14732 288 aa12.3□□□□□ -0.44
UBE3B-206ENST00000536398 PDE5AO76074 875 aa12.3□□□□□ -0.44
UBE3B-206ENST00000536398 F12P00748 615 aaPredicted RBP12.3□□□□□ -0.44
UBE3B-206ENST00000536398 MMP7P09237 267 aaPredicted RBP12.3□□□□□ -0.44
UBE3B-206ENST00000536398 BMP4P12644 408 aa12.3□□□□□ -0.44
UBE3B-206ENST00000536398 ATP6V1B2P21281 511 aa12.3□□□□□ -0.44
UBE3B-206ENST00000536398 FXYD6P3P58550 94 aa12.3□□□□□ -0.44
UBE3B-206ENST00000536398 MRPS34P82930 218 aaKnown RBP12.3□□□□□ -0.44
UBE3B-206ENST00000536398 SPIBQ01892 262 aa12.3□□□□□ -0.44
UBE3B-206ENST00000536398 THSD4Q6ZMP0 1018 aa12.3□□□□□ -0.44
UBE3B-206ENST00000536398 LRP11Q86VZ4 500 aa12.3□□□□□ -0.44
UBE3B-206ENST00000536398 SLC30A7Q8NEW0 376 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms