RNA–Protein interactions for RNA: ENST00000536003.5

PAAF1-207, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-207ENST00000536003 J3KTA2 159 aa13.18□□□□□ -0.3
PAAF1-207ENST00000536003 M0R233 179 aa13.18□□□□□ -0.3
PAAF1-207ENST00000536003 SYNGR3O43761 229 aa13.18□□□□□ -0.3
PAAF1-207ENST00000536003 NCR1O76036 304 aa13.18□□□□□ -0.3
PAAF1-207ENST00000536003 HPXP02790 462 aa13.18□□□□□ -0.3
PAAF1-207ENST00000536003 FAM157BP0CG42 384 aa13.18□□□□□ -0.3
PAAF1-207ENST00000536003 CDAP32320 146 aa13.18□□□□□ -0.3
PAAF1-207ENST00000536003 YAP1P46937 504 aaKnown RBP13.18□□□□□ -0.3
PAAF1-207ENST00000536003 GALK2Q01415 458 aa13.18□□□□□ -0.3
PAAF1-207ENST00000536003 FAM166AQ6J272 317 aa13.18□□□□□ -0.3
PAAF1-207ENST00000536003 PODNL1Q6PEZ8 512 aa13.18□□□□□ -0.3
PAAF1-207ENST00000536003 ZNF786Q8N393 782 aa13.18□□□□□ -0.3
PAAF1-207ENST00000536003 PCYOX1LQ8NBM8 494 aa13.18□□□□□ -0.3
PAAF1-207ENST00000536003 NEU4Q8WWR8 484 aaPredicted RBP13.18□□□□□ -0.3
PAAF1-207ENST00000536003 LIPHQ8WWY8 451 aa13.18□□□□□ -0.3
PAAF1-207ENST00000536003 HDAC2Q92769 488 aaKnown RBP13.18□□□□□ -0.3
PAAF1-207ENST00000536003 NMD3Q96D46 503 aaKnown RBP13.18□□□□□ -0.3
PAAF1-207ENST00000536003 PRRC1Q96M27 445 aa13.18□□□□□ -0.3
PAAF1-207ENST00000536003 TSPAN32Q96QS1 320 aa13.18□□□□□ -0.3
PAAF1-207ENST00000536003 BEX2Q9BXY8 128 aa13.18□□□□□ -0.3
PAAF1-207ENST00000536003 GID8Q9NWU2 228 aa13.18□□□□□ -0.3
PAAF1-207ENST00000536003 SLC7A8Q9UHI5 535 aa13.18□□□□□ -0.3
PAAF1-207ENST00000536003 UGT2A1Q9Y4X1 527 aa13.18□□□□□ -0.3
PAAF1-207ENST00000536003 ELOVL7A1L3X0 281 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 NME4O00746 187 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 FFAR1O14842 300 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 IGF2P01344 180 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 ERCC1P07992 297 aaPredicted RBP13.17□□□□□ -0.3
PAAF1-207ENST00000536003 MMP7P09237 267 aaPredicted RBP13.17□□□□□ -0.3
PAAF1-207ENST00000536003 TACSTD2P09758 323 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 ACADSP16219 412 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 TOP3AQ13472 1001 aaPredicted RBP13.17□□□□□ -0.3
PAAF1-207ENST00000536003 LAPTM4AQ15012 233 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 ALKBH6Q3KRA9 238 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 ELFN2Q5R3F8 820 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 FAM120AOSQ5T036 256 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 C10orf128Q5T292 105 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 SLC16A14Q7RTX9 510 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 IGFN1Q86VF2 1251 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 PHC2Q8IXK0 858 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 LRRC18Q8N456 261 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 UBASH3BQ8TF42 649 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 NABP1Q96AH0 204 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 SHARPINQ9H0F6 387 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 REV1Q9UBZ9 1251 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 FBXO9Q9UK97 447 aaPredicted RBP13.17□□□□□ -0.3
PAAF1-207ENST00000536003 KCNS2Q9ULS6 477 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 MED31Q9Y3C7 131 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 SPEF1Q9Y4P9 236 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 RNF212BA8MTL3 300 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 VSTM5A8MXK1 200 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 FARS2O95363 451 aaKnown RBP13.17□□□□□ -0.3
PAAF1-207ENST00000536003 CLPTM1O96005 669 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 TGFAP01135 160 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 IFNA14P01570 189 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 NAT2P11245 290 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 MAKP20794 623 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 EVX1P49640 407 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 DAP3P51398 398 aaKnown RBP13.17□□□□□ -0.3
PAAF1-207ENST00000536003 ZNF133P52736 654 aaPredicted RBP13.17□□□□□ -0.3
PAAF1-207ENST00000536003 RPS23P62266 143 aaKnown RBP13.17□□□□□ -0.3
PAAF1-207ENST00000536003 SELENOWP63302 87 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 SRSF2Q01130 221 aaKnown RBP13.17□□□□□ -0.3
PAAF1-207ENST00000536003 FHL1Q13642 323 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 CCNIQ14094 377 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 TREML1Q86YW5 311 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 SLC15A3Q8IY34 581 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 SPATA3Q8NHX4 192 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 DUSP13Q9UII6 198 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 FBXL3Q9UKT7 428 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 HIF3AQ9Y2N7 669 aa13.17□□□□□ -0.3
PAAF1-207ENST00000536003 TRAV27A0A087WT01 109 aa13.16□□□□□ -0.3
PAAF1-207ENST00000536003 ERICH4A6NGS2 130 aa13.16□□□□□ -0.3
PAAF1-207ENST00000536003 SLC22A2O15244 555 aa13.16□□□□□ -0.3
PAAF1-207ENST00000536003 PHF1O43189 567 aaPredicted RBP13.16□□□□□ -0.3
PAAF1-207ENST00000536003 IFNA2P01563 188 aa13.16□□□□□ -0.3
PAAF1-207ENST00000536003 THRBP10828 461 aa13.16□□□□□ -0.3
PAAF1-207ENST00000536003 IFI30P13284 250 aa13.16□□□□□ -0.3
PAAF1-207ENST00000536003 SLC7A2P52569 658 aa13.16□□□□□ -0.3
PAAF1-207ENST00000536003 LIPEQ05469 1076 aa13.16□□□□□ -0.3
PAAF1-207ENST00000536003 SLC36A2Q495M3 483 aa13.16□□□□□ -0.3
PAAF1-207ENST00000536003 OFCC1Q8IZS5 231 aa13.16□□□□□ -0.3
PAAF1-207ENST00000536003 ZNF540Q8NDQ6 660 aa13.16□□□□□ -0.3
PAAF1-207ENST00000536003 RBM15BQ8NDT2 890 aaKnown RBP13.16□□□□□ -0.3
PAAF1-207ENST00000536003 CPEB3Q8NE35 698 aaKnown RBP13.16□□□□□ -0.3
PAAF1-207ENST00000536003 BPIFA2Q96DR5 249 aa13.16□□□□□ -0.3
PAAF1-207ENST00000536003 RNF121Q9H920 327 aa13.16□□□□□ -0.3
PAAF1-207ENST00000536003 A0A1W2PPW3 197 aa13.15□□□□□ -0.3
PAAF1-207ENST00000536003 NPIPB13A6NJU9 1138 aa13.15□□□□□ -0.3
PAAF1-207ENST00000536003 CENPBD1B2RD01 187 aa13.15□□□□□ -0.3
PAAF1-207ENST00000536003 NPIPB4C9JG80 1138 aa13.15□□□□□ -0.3
PAAF1-207ENST00000536003 MGRN1O60291 552 aa13.15□□□□□ -0.3
PAAF1-207ENST00000536003 COX4I1P13073 169 aa13.15□□□□□ -0.3
PAAF1-207ENST00000536003 APEX1P27695 318 aaKnown RBP13.15□□□□□ -0.3
PAAF1-207ENST00000536003 ZNF84P51523 738 aa13.15□□□□□ -0.3
PAAF1-207ENST00000536003 CD47Q08722 323 aa13.15□□□□□ -0.3
PAAF1-207ENST00000536003 ST3GAL3Q11203 375 aa13.15□□□□□ -0.3
PAAF1-207ENST00000536003 NRN1LQ496H8 165 aa13.15□□□□□ -0.3
PAAF1-207ENST00000536003 ALG10Q5BKT4 473 aa13.15□□□□□ -0.3
PAAF1-207ENST00000536003 TMEM255AQ5JRV8 349 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms