RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 HES5Q5TA89 166 aa12.04□□□□□ -0.48
VPS33B-202ENST00000535906 CD276Q5ZPR3 534 aa12.04□□□□□ -0.48
VPS33B-202ENST00000535906 PRSS45Q7RTY3 260 aa12.04□□□□□ -0.48
VPS33B-202ENST00000535906 CMTM4Q8IZR5 234 aa12.04□□□□□ -0.48
VPS33B-202ENST00000535906 ZNF433Q8N7K0 673 aaPredicted RBP12.04□□□□□ -0.48
VPS33B-202ENST00000535906 BMPERQ8N8U9 685 aa12.04□□□□□ -0.48
VPS33B-202ENST00000535906 OTOSQ8NHW6 89 aa12.04□□□□□ -0.48
VPS33B-202ENST00000535906 TMEM234Q8WY98 164 aa12.04□□□□□ -0.48
VPS33B-202ENST00000535906 PHF21AQ96BD5 680 aa12.04□□□□□ -0.48
VPS33B-202ENST00000535906 CRB3Q9BUF7 120 aa12.04□□□□□ -0.48
VPS33B-202ENST00000535906 MRPL39Q9NYK5 338 aaKnown RBP12.04□□□□□ -0.48
VPS33B-202ENST00000535906 STMN3Q9NZ72 180 aa12.04□□□□□ -0.48
VPS33B-202ENST00000535906 FKBP7Q9Y680 259 aa12.04□□□□□ -0.48
VPS33B-202ENST00000535906 ZNF593O00488 134 aaPredicted RBP12.03□□□□□ -0.48
VPS33B-202ENST00000535906 OR2T1O43869 369 aa12.03□□□□□ -0.48
VPS33B-202ENST00000535906 ONECUT2O95948 504 aa12.03□□□□□ -0.48
VPS33B-202ENST00000535906 HLA-DQA2P01906 255 aa12.03□□□□□ -0.48
VPS33B-202ENST00000535906 CTLA4P16410 223 aa12.03□□□□□ -0.48
VPS33B-202ENST00000535906 CENPAP49450 140 aa12.03□□□□□ -0.48
VPS33B-202ENST00000535906 SNRPD2P62316 118 aaKnown RBP12.03□□□□□ -0.48
VPS33B-202ENST00000535906 EGR3Q06889 387 aa12.03□□□□□ -0.48
VPS33B-202ENST00000535906 SNTB2Q13425 540 aaKnown RBP12.03□□□□□ -0.48
VPS33B-202ENST00000535906 ANGPT1Q15389 498 aa12.03□□□□□ -0.48
VPS33B-202ENST00000535906 FAM199XQ6PEV8 388 aaPredicted RBP12.03□□□□□ -0.48
VPS33B-202ENST00000535906 SLC35D2Q76EJ3 337 aa12.03□□□□□ -0.48
VPS33B-202ENST00000535906 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.03□□□□□ -0.48
VPS33B-202ENST00000535906 OR11H7Q8NGC8 314 aa12.03□□□□□ -0.48
VPS33B-202ENST00000535906 OR2G2Q8NGZ5 317 aa12.03□□□□□ -0.48
VPS33B-202ENST00000535906 IFI44Q8TCB0 444 aa12.03□□□□□ -0.48
VPS33B-202ENST00000535906 NAT6Q93015 286 aa12.03□□□□□ -0.48
VPS33B-202ENST00000535906 SLX1AQ9BQ83 275 aa12.03□□□□□ -0.48
VPS33B-202ENST00000535906 OR51J1Q9H342 316 aa12.03□□□□□ -0.48
VPS33B-202ENST00000535906 EMC7Q9NPA0 242 aa12.03□□□□□ -0.48
VPS33B-202ENST00000535906 ZNF275Q9NSD4 429 aaPredicted RBP12.03□□□□□ -0.48
VPS33B-202ENST00000535906 SLCO1C1Q9NYB5 712 aa12.03□□□□□ -0.48
VPS33B-202ENST00000535906 TMEM14AQ9Y6G1 99 aa12.03□□□□□ -0.48
VPS33B-202ENST00000535906 MEN1O00255 615 aa12.03□□□□□ -0.48
VPS33B-202ENST00000535906 ADRB1P08588 477 aa12.03□□□□□ -0.48
VPS33B-202ENST00000535906 SOX2P48431 317 aa12.03□□□□□ -0.48
VPS33B-202ENST00000535906 CCR6P51684 374 aa12.03□□□□□ -0.48
VPS33B-202ENST00000535906 Q499Y3 187 aa12.03□□□□□ -0.48
VPS33B-202ENST00000535906 BTN2A1Q7KYR7 527 aa12.03□□□□□ -0.48
VPS33B-202ENST00000535906 IZUMO1Q8IYV9 350 aa12.03□□□□□ -0.48
VPS33B-202ENST00000535906 C9orf62Q8N4C0 152 aa12.03□□□□□ -0.48
VPS33B-202ENST00000535906 ST8SIA1Q92185 356 aa12.03□□□□□ -0.48
VPS33B-202ENST00000535906 NSMAFQ92636 917 aa12.03□□□□□ -0.48
VPS33B-202ENST00000535906 ATOH1Q92858 354 aaPredicted RBP12.03□□□□□ -0.48
VPS33B-202ENST00000535906 MNTQ99583 582 aa12.03□□□□□ -0.48
VPS33B-202ENST00000535906 MRPL22Q9NWU5 206 aaKnown RBP12.03□□□□□ -0.48
VPS33B-202ENST00000535906 VSX1Q9NZR4 365 aaPredicted RBP12.03□□□□□ -0.48
VPS33B-202ENST00000535906 ING4Q9UNL4 249 aa12.03□□□□□ -0.48
VPS33B-202ENST00000535906 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.02□□□□□ -0.48
VPS33B-202ENST00000535906 IGLV1-36A0A0B4J1U3 117 aa12.02□□□□□ -0.48
VPS33B-202ENST00000535906 SLC22A23A1A5C7 686 aa12.02□□□□□ -0.48
VPS33B-202ENST00000535906 OR4C45A6NMZ5 311 aa12.02□□□□□ -0.48
VPS33B-202ENST00000535906 SHISA8B8ZZ34 492 aa12.02□□□□□ -0.48
VPS33B-202ENST00000535906 MS4A18H0YCH9 400 aa12.02□□□□□ -0.48
VPS33B-202ENST00000535906 H3BSH0 61 aa12.02□□□□□ -0.48
VPS33B-202ENST00000535906 ITGA10O75578 1167 aa12.02□□□□□ -0.48
VPS33B-202ENST00000535906 IGHMP01871 453 aa12.02□□□□□ -0.48
VPS33B-202ENST00000535906 DPP4P27487 766 aa12.02□□□□□ -0.48
VPS33B-202ENST00000535906 GDNFP39905 211 aa12.02□□□□□ -0.48
VPS33B-202ENST00000535906 HTR2BP41595 481 aa12.02□□□□□ -0.48
VPS33B-202ENST00000535906 GSG1Q2KHT4 349 aa12.02□□□□□ -0.48
VPS33B-202ENST00000535906 ODF4Q2M2E3 257 aa12.02□□□□□ -0.48
VPS33B-202ENST00000535906 MS4A18Q3C1V0 323 aa12.02□□□□□ -0.48
VPS33B-202ENST00000535906 TMEM205Q6UW68 189 aa12.02□□□□□ -0.48
VPS33B-202ENST00000535906 STAC2Q6ZMT1 411 aa12.02□□□□□ -0.48
VPS33B-202ENST00000535906 ZNF767PQ75MW2 155 aa12.02□□□□□ -0.48
VPS33B-202ENST00000535906 PRSS35Q8N3Z0 413 aa12.02□□□□□ -0.48
VPS33B-202ENST00000535906 OR51A4Q8NGJ6 313 aa12.02□□□□□ -0.48
VPS33B-202ENST00000535906 OR10AC1Q8NH08 325 aa12.02□□□□□ -0.48
VPS33B-202ENST00000535906 NXPE2Q96DL1 559 aa12.02□□□□□ -0.48
VPS33B-202ENST00000535906 ACTR6Q9GZN1 396 aa12.02□□□□□ -0.48
VPS33B-202ENST00000535906 RANBP3Q9H6Z4 567 aaPredicted RBP12.02□□□□□ -0.48
VPS33B-202ENST00000535906 AUNIPQ9H7T9 357 aa12.02□□□□□ -0.48
VPS33B-202ENST00000535906 PRMT8Q9NR22 394 aaPredicted RBP12.02□□□□□ -0.48
VPS33B-202ENST00000535906 AKAP7Q9P0M2 348 aaPredicted RBP12.02□□□□□ -0.48
VPS33B-202ENST00000535906 MYOTQ9UBF9 498 aa12.02□□□□□ -0.48
VPS33B-202ENST00000535906 V9GY05 133 aa12.02□□□□□ -0.48
VPS33B-202ENST00000535906 FREM3P0C091 2139 aa12.02□□□□□ -0.48
VPS33B-202ENST00000535906 OR2J2O76002 312 aa12.02□□□□□ -0.49
VPS33B-202ENST00000535906 MT-ND4P03905 459 aa12.02□□□□□ -0.49
VPS33B-202ENST00000535906 H2AFB2P0C5Z0 115 aa12.02□□□□□ -0.49
VPS33B-202ENST00000535906 ZNF24P17028 368 aa12.02□□□□□ -0.49
VPS33B-202ENST00000535906 CLDN12P56749 244 aa12.02□□□□□ -0.49
VPS33B-202ENST00000535906 GNG2P59768 71 aa12.02□□□□□ -0.49
VPS33B-202ENST00000535906 STPG1Q5TH74 334 aa12.02□□□□□ -0.49
VPS33B-202ENST00000535906 MRPL14Q6P1L8 145 aaKnown RBP12.02□□□□□ -0.49
VPS33B-202ENST00000535906 C5orf46Q6UWT4 87 aa12.02□□□□□ -0.49
VPS33B-202ENST00000535906 LRRN1Q6UXK5 716 aa12.02□□□□□ -0.49
VPS33B-202ENST00000535906 WDFY1Q8IWB7 410 aa12.02□□□□□ -0.49
VPS33B-202ENST00000535906 MAML2Q8IZL2 1156 aaPredicted RBP12.02□□□□□ -0.49
VPS33B-202ENST00000535906 OR5L2Q8NGL0 311 aa12.02□□□□□ -0.49
VPS33B-202ENST00000535906 OR8K3Q8NH51 312 aa12.02□□□□□ -0.49
VPS33B-202ENST00000535906 RNF138Q8WVD3 245 aa12.02□□□□□ -0.49
VPS33B-202ENST00000535906 SNAPC3Q92966 411 aa12.02□□□□□ -0.49
VPS33B-202ENST00000535906 SLC25A38Q96DW6 304 aa12.02□□□□□ -0.49
VPS33B-202ENST00000535906 MRI1Q9BV20 369 aa12.02□□□□□ -0.49
VPS33B-202ENST00000535906 ULBP3Q9BZM4 244 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms