RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 NEUROG2Q9H2A3 272 aa2.79□□□□□ -1.96
PRKDC-205ENST00000535375 RNF167Q9H6Y7 350 aa2.79□□□□□ -1.96
PRKDC-205ENST00000535375 RANBP3Q9H6Z4 567 aaPredicted RBP2.79□□□□□ -1.96
PRKDC-205ENST00000535375 NEK6Q9HC98 313 aa2.79□□□□□ -1.96
PRKDC-205ENST00000535375 CLCF1Q9UBD9 225 aa2.79□□□□□ -1.96
PRKDC-205ENST00000535375 OR12D3Q9UGF7 316 aa2.79□□□□□ -1.96
PRKDC-205ENST00000535375 TMED5Q9Y3A6 229 aa2.79□□□□□ -1.96
PRKDC-205ENST00000535375 COL1A2P08123 1366 aa2.78□□□□□ -1.96
PRKDC-205ENST00000535375 A0A075B6Q4 140 aa2.78□□□□□ -1.96
PRKDC-205ENST00000535375 C12orf71A8MTZ7 269 aa2.78□□□□□ -1.96
PRKDC-205ENST00000535375 B4GALT5O43286 388 aa2.78□□□□□ -1.96
PRKDC-205ENST00000535375 PSTPIP1O43586 416 aa2.78□□□□□ -1.96
PRKDC-205ENST00000535375 C6orf47O95873 294 aa2.78□□□□□ -1.96
PRKDC-205ENST00000535375 IGLV3-19P01714 112 aa2.78□□□□□ -1.96
PRKDC-205ENST00000535375 CD5P06127 495 aa2.78□□□□□ -1.96
PRKDC-205ENST00000535375 C2P06681 752 aa2.78□□□□□ -1.96
PRKDC-205ENST00000535375 OTX1P32242 354 aaPredicted RBP2.78□□□□□ -1.96
PRKDC-205ENST00000535375 HSD17B2P37059 387 aa2.78□□□□□ -1.96
PRKDC-205ENST00000535375 CDH6P55285 790 aa2.78□□□□□ -1.96
PRKDC-205ENST00000535375 ERVK-25P63136 954 aa2.78□□□□□ -1.96
PRKDC-205ENST00000535375 PPP1R7Q15435 360 aa2.78□□□□□ -1.96
PRKDC-205ENST00000535375 TRIM40Q6P9F5 258 aa2.78□□□□□ -1.96
PRKDC-205ENST00000535375 BIVMQ86UB2 503 aa2.78□□□□□ -1.96
PRKDC-205ENST00000535375 PLA2G4DQ86XP0 818 aa2.78□□□□□ -1.96
PRKDC-205ENST00000535375 MS4A15Q8N5U1 240 aa2.78□□□□□ -1.96
PRKDC-205ENST00000535375 ACOT4Q8N9L9 421 aa2.78□□□□□ -1.96
PRKDC-205ENST00000535375 FNDC5Q8NAU1 212 aa2.78□□□□□ -1.96
PRKDC-205ENST00000535375 B3GNT7Q8NFL0 401 aa2.78□□□□□ -1.96
PRKDC-205ENST00000535375 OR1N2Q8NGR9 330 aa2.78□□□□□ -1.96
PRKDC-205ENST00000535375 GPR151Q8TDV0 419 aa2.78□□□□□ -1.96
PRKDC-205ENST00000535375 ACMSDQ8TDX5 336 aa2.78□□□□□ -1.96
PRKDC-205ENST00000535375 FRZBQ92765 325 aa2.78□□□□□ -1.96
PRKDC-205ENST00000535375 SMARCD2Q92925 531 aa2.78□□□□□ -1.96
PRKDC-205ENST00000535375 CHP1Q99653 195 aa2.78□□□□□ -1.96
PRKDC-205ENST00000535375 ECSITQ9BQ95 431 aa2.78□□□□□ -1.96
PRKDC-205ENST00000535375 GBA3Q9H227 469 aa2.78□□□□□ -1.96
PRKDC-205ENST00000535375 SRMSQ9H3Y6 488 aa2.78□□□□□ -1.96
PRKDC-205ENST00000535375 ANKRA2Q9H9E1 313 aa2.78□□□□□ -1.96
PRKDC-205ENST00000535375 SCN2AQ99250 2005 aa2.78□□□□□ -1.96
PRKDC-205ENST00000535375 TRBV11-1A0A0K0K1C0 115 aa2.77□□□□□ -1.97
PRKDC-205ENST00000535375 RBMY1BA6NDE4 496 aaKnown RBP2.77□□□□□ -1.97
PRKDC-205ENST00000535375 RBMY1EA6NEQ0 496 aaKnown RBP2.77□□□□□ -1.97
PRKDC-205ENST00000535375 C12orf77C9JDV5 145 aa2.77□□□□□ -1.97
PRKDC-205ENST00000535375 C9JVG2 144 aa2.77□□□□□ -1.97
PRKDC-205ENST00000535375 CCL21O00585 134 aa2.77□□□□□ -1.97
PRKDC-205ENST00000535375 SLC31A2O15432 143 aa2.77□□□□□ -1.97
PRKDC-205ENST00000535375 OR2F2O95006 317 aa2.77□□□□□ -1.97
PRKDC-205ENST00000535375 FGF4P08620 206 aa2.77□□□□□ -1.97
PRKDC-205ENST00000535375 RHOXF2BP0C7M4 288 aa2.77□□□□□ -1.97
PRKDC-205ENST00000535375 RBMY1DP0C7P1 496 aaKnown RBP2.77□□□□□ -1.97
PRKDC-205ENST00000535375 RBMY1A1P0DJD3 496 aaKnown RBP2.77□□□□□ -1.97
PRKDC-205ENST00000535375 CHMLP26374 656 aa2.77□□□□□ -1.97
PRKDC-205ENST00000535375 BTCP35070 178 aa2.77□□□□□ -1.97
PRKDC-205ENST00000535375 ATP5OP48047 213 aa2.77□□□□□ -1.97
PRKDC-205ENST00000535375 ACLYP53396 1101 aa2.77□□□□□ -1.97
PRKDC-205ENST00000535375 GPX6P59796 221 aa2.77□□□□□ -1.97
PRKDC-205ENST00000535375 RCN1Q15293 331 aa2.77□□□□□ -1.97
PRKDC-205ENST00000535375 LY6G6FQ5SQ64 297 aa2.77□□□□□ -1.97
PRKDC-205ENST00000535375 NANOGP8Q6NSW7 305 aa2.77□□□□□ -1.97
PRKDC-205ENST00000535375 NIPA1Q7RTP0 329 aa2.77□□□□□ -1.97
PRKDC-205ENST00000535375 SCD5Q86SK9 330 aa2.77□□□□□ -1.97
PRKDC-205ENST00000535375 ZNF615Q8N8J6 731 aa2.77□□□□□ -1.97
PRKDC-205ENST00000535375 ZNF557Q8N988 423 aaPredicted RBP2.77□□□□□ -1.97
PRKDC-205ENST00000535375 VN1R2Q8NFZ6 395 aa2.77□□□□□ -1.97
PRKDC-205ENST00000535375 BMFQ96LC9 184 aa2.77□□□□□ -1.97
PRKDC-205ENST00000535375 LINC00477Q96M19 166 aa2.77□□□□□ -1.97
PRKDC-205ENST00000535375 ZNF578Q96N58 590 aaPredicted RBP2.77□□□□□ -1.97
PRKDC-205ENST00000535375 SORT1Q99523 831 aa2.77□□□□□ -1.97
PRKDC-205ENST00000535375 CENPKQ9BS16 269 aa2.77□□□□□ -1.97
PRKDC-205ENST00000535375 NDFIP1Q9BT67 221 aa2.77□□□□□ -1.97
PRKDC-205ENST00000535375 TMEM59Q9BXS4 323 aa2.77□□□□□ -1.97
PRKDC-205ENST00000535375 EXO5Q9H790 373 aa2.77□□□□□ -1.97
PRKDC-205ENST00000535375 TMEM185BQ9H7F4 350 aa2.77□□□□□ -1.97
PRKDC-205ENST00000535375 CALYQ9NYX4 217 aa2.77□□□□□ -1.97
PRKDC-205ENST00000535375 XCL2Q9UBD3 114 aa2.77□□□□□ -1.97
PRKDC-205ENST00000535375 RABL2AQ9UBK7 228 aaPredicted RBP2.77□□□□□ -1.97
PRKDC-205ENST00000535375 MMP17Q9ULZ9 603 aa2.77□□□□□ -1.97
PRKDC-205ENST00000535375 IGLV2-18A0A075B6J9 118 aa2.76□□□□□ -1.97
PRKDC-205ENST00000535375 SERTM2A0A1B0GWG4 89 aa2.76□□□□□ -1.97
PRKDC-205ENST00000535375 PEX7O00628 323 aa2.76□□□□□ -1.97
PRKDC-205ENST00000535375 RBBP9O75884 186 aa2.76□□□□□ -1.97
PRKDC-205ENST00000535375 TSPAN13O95857 204 aa2.76□□□□□ -1.97
PRKDC-205ENST00000535375 ASGR1P07306 291 aa2.76□□□□□ -1.97
PRKDC-205ENST00000535375 TNNI1P19237 187 aa2.76□□□□□ -1.97
PRKDC-205ENST00000535375 IFNA8P32881 189 aa2.76□□□□□ -1.97
PRKDC-205ENST00000535375 NSG1P42857 185 aa2.76□□□□□ -1.97
PRKDC-205ENST00000535375 TNNT2P45379 298 aaPredicted RBP2.76□□□□□ -1.97
PRKDC-205ENST00000535375 MRPS22P82650 360 aaKnown RBP2.76□□□□□ -1.97
PRKDC-205ENST00000535375 ACVR1Q04771 509 aa2.76□□□□□ -1.97
PRKDC-205ENST00000535375 RSPO1Q2MKA7 263 aaPredicted RBP2.76□□□□□ -1.97
PRKDC-205ENST00000535375 VPS26BQ4G0F5 336 aa2.76□□□□□ -1.97
PRKDC-205ENST00000535375 ABCA11PQ4W5N1 156 aa2.76□□□□□ -1.97
PRKDC-205ENST00000535375 COA6Q5JTJ3 125 aaKnown RBP2.76□□□□□ -1.97
PRKDC-205ENST00000535375 SPANXN2Q5MJ10 180 aa2.76□□□□□ -1.97
PRKDC-205ENST00000535375 SLC8B1Q6J4K2 584 aa2.76□□□□□ -1.97
PRKDC-205ENST00000535375 SLC25A34Q6PIV7 304 aa2.76□□□□□ -1.97
PRKDC-205ENST00000535375 C19orf35Q6ZS72 473 aa2.76□□□□□ -1.97
PRKDC-205ENST00000535375 LHFPL3Q86UP9 236 aa2.76□□□□□ -1.97
PRKDC-205ENST00000535375 TSEN15Q8WW01 171 aaKnown RBP2.76□□□□□ -1.97
PRKDC-205ENST00000535375 SLC38A4Q969I6 547 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms