RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 GCKP35557 465 aa4.37□□□□□ -1.71
CASP4-213ENST00000534356 ADIGQ0VDE8 80 aa4.37□□□□□ -1.71
CASP4-213ENST00000534356 ILKQ13418 452 aa4.37□□□□□ -1.71
CASP4-213ENST00000534356 FZD2Q14332 565 aa4.37□□□□□ -1.71
CASP4-213ENST00000534356 ELAVL3Q14576 367 aaKnown RBP4.37□□□□□ -1.71
CASP4-213ENST00000534356 LAGE3Q14657 143 aa4.37□□□□□ -1.71
CASP4-213ENST00000534356 NDUFA9Q16795 377 aa4.37□□□□□ -1.71
CASP4-213ENST00000534356 GOLGA7BQ2TAP0 167 aa4.37□□□□□ -1.71
CASP4-213ENST00000534356 TIGITQ495A1 244 aa4.37□□□□□ -1.71
CASP4-213ENST00000534356 SYPL2Q5VXT5 272 aa4.37□□□□□ -1.71
CASP4-213ENST00000534356 ACSM5Q6NUN0 579 aa4.37□□□□□ -1.71
CASP4-213ENST00000534356 CLEC18BQ6UXF7 455 aa4.37□□□□□ -1.71
CASP4-213ENST00000534356 Q6ZSR6 202 aa4.37□□□□□ -1.71
CASP4-213ENST00000534356 CCDC65Q8IXS2 484 aa4.37□□□□□ -1.71
CASP4-213ENST00000534356 NEIL2Q969S2 332 aa4.37□□□□□ -1.71
CASP4-213ENST00000534356 MARC2Q969Z3 335 aa4.37□□□□□ -1.71
CASP4-213ENST00000534356 TBC1D31Q96DN5 1066 aa4.37□□□□□ -1.71
CASP4-213ENST00000534356 OR5B2Q96R09 309 aa4.37□□□□□ -1.71
CASP4-213ENST00000534356 CCNL2Q96S94 520 aaPredicted RBP4.37□□□□□ -1.71
CASP4-213ENST00000534356 CITED1Q99966 193 aa4.37□□□□□ -1.71
CASP4-213ENST00000534356 CALN1Q9BXU9 219 aa4.37□□□□□ -1.71
CASP4-213ENST00000534356 SYNDIG1Q9H7V2 258 aa4.37□□□□□ -1.71
CASP4-213ENST00000534356 STOML2Q9UJZ1 356 aa4.37□□□□□ -1.71
CASP4-213ENST00000534356 MFHAS1Q9Y4C4 1052 aa4.37□□□□□ -1.71
CASP4-213ENST00000534356 MAB21L2Q9Y586 359 aa4.37□□□□□ -1.71
CASP4-213ENST00000534356 HIVEP3Q5T1R4 2406 aa4.37□□□□□ -1.71
CASP4-213ENST00000534356 CSMD1Q96PZ7 3565 aa4.37□□□□□ -1.71
CASP4-213ENST00000534356 ESPL1Q14674 2120 aa4.37□□□□□ -1.71
CASP4-213ENST00000534356 C2CD3Q4AC94 2353 aa4.36□□□□□ -1.71
CASP4-213ENST00000534356 VPS37CA5D8V6 355 aaPredicted RBP4.36□□□□□ -1.71
CASP4-213ENST00000534356 TUBAL3A6NHL2 446 aa4.36□□□□□ -1.71
CASP4-213ENST00000534356 ZNF705EA8MWA4 302 aaPredicted RBP4.36□□□□□ -1.71
CASP4-213ENST00000534356 KLRC4O43908 158 aa4.36□□□□□ -1.71
CASP4-213ENST00000534356 F10P00742 488 aa4.36□□□□□ -1.71
CASP4-213ENST00000534356 IGLV3-27P01718 113 aa4.36□□□□□ -1.71
CASP4-213ENST00000534356 SERPINA2P20848 420 aa4.36□□□□□ -1.71
CASP4-213ENST00000534356 KIR2DS2P43631 304 aa4.36□□□□□ -1.71
CASP4-213ENST00000534356 UQCRFS1P47985 274 aa4.36□□□□□ -1.71
CASP4-213ENST00000534356 GNB2P62879 340 aa4.36□□□□□ -1.71
CASP4-213ENST00000534356 CCL7P80098 99 aa4.36□□□□□ -1.71
CASP4-213ENST00000534356 EGFEM1PQ0D2K5 195 aa4.36□□□□□ -1.71
CASP4-213ENST00000534356 INCA1Q0VD86 236 aa4.36□□□□□ -1.71
CASP4-213ENST00000534356 C2orf83Q53S99 150 aa4.36□□□□□ -1.71
CASP4-213ENST00000534356 DNAJC21Q5F1R6 531 aaKnown RBP4.36□□□□□ -1.71
CASP4-213ENST00000534356 PIP5KL1Q5T9C9 394 aa4.36□□□□□ -1.71
CASP4-213ENST00000534356 PMF1Q6P1K2 205 aa4.36□□□□□ -1.71
CASP4-213ENST00000534356 DPY19L4Q7Z388 723 aa4.36□□□□□ -1.71
CASP4-213ENST00000534356 UNC93AQ86WB7 457 aa4.36□□□□□ -1.71
CASP4-213ENST00000534356 PPP1R27Q86WC6 154 aa4.36□□□□□ -1.71
CASP4-213ENST00000534356 TMEM17Q86X19 198 aa4.36□□□□□ -1.71
CASP4-213ENST00000534356 BBS1Q8NFJ9 593 aa4.36□□□□□ -1.71
CASP4-213ENST00000534356 CCDC110Q8TBZ0 833 aa4.36□□□□□ -1.71
CASP4-213ENST00000534356 LMX1AQ8TE12 382 aa4.36□□□□□ -1.71
CASP4-213ENST00000534356 CYYR1Q96J86 154 aa4.36□□□□□ -1.71
CASP4-213ENST00000534356 CHIAQ9BZP6 476 aa4.36□□□□□ -1.71
CASP4-213ENST00000534356 SHANK1Q9Y566 2161 aa4.36□□□□□ -1.71
CASP4-213ENST00000534356 SETD2Q9BYW2 2564 aaPredicted RBP4.35□□□□□ -1.71
CASP4-213ENST00000534356 CHD5Q8TDI0 1954 aa4.35□□□□□ -1.71
CASP4-213ENST00000534356 PRAMEF26H0Y7S4 382 aa4.35□□□□□ -1.71
CASP4-213ENST00000534356 CSF2P04141 144 aa4.35□□□□□ -1.71
CASP4-213ENST00000534356 CALCBP10092 127 aa4.35□□□□□ -1.71
CASP4-213ENST00000534356 CCL4P13236 92 aa4.35□□□□□ -1.71
CASP4-213ENST00000534356 NCF1P14598 390 aaPredicted RBP4.35□□□□□ -1.71
CASP4-213ENST00000534356 CALRP27797 417 aaKnown RBP4.35□□□□□ -1.71
CASP4-213ENST00000534356 UGT1A5P35504 534 aa4.35□□□□□ -1.71
CASP4-213ENST00000534356 DUSP3P51452 185 aaPredicted RBP4.35□□□□□ -1.71
CASP4-213ENST00000534356 UCNP55089 124 aa4.35□□□□□ -1.71
CASP4-213ENST00000534356 DAOAP59103 153 aa4.35□□□□□ -1.71
CASP4-213ENST00000534356 NUCB2P80303 420 aa4.35□□□□□ -1.71
CASP4-213ENST00000534356 ZNF45Q02386 682 aa4.35□□□□□ -1.71
CASP4-213ENST00000534356 OTPQ5XKR4 325 aa4.35□□□□□ -1.71
CASP4-213ENST00000534356 CCDC73Q6ZRK6 1079 aa4.35□□□□□ -1.71
CASP4-213ENST00000534356 ERI1Q8IV48 349 aaKnown RBP4.35□□□□□ -1.71
CASP4-213ENST00000534356 C12orf56Q8IXR9 622 aa4.35□□□□□ -1.71
CASP4-213ENST00000534356 FAM131CQ96AQ9 280 aa4.35□□□□□ -1.71
CASP4-213ENST00000534356 IMMP1LQ96LU5 166 aa4.35□□□□□ -1.71
CASP4-213ENST00000534356 NICN1Q9BSH3 213 aa4.35□□□□□ -1.71
CASP4-213ENST00000534356 ZSCAN16Q9H4T2 348 aaPredicted RBP4.35□□□□□ -1.71
CASP4-213ENST00000534356 CISHQ9NSE2 258 aa4.35□□□□□ -1.71
CASP4-213ENST00000534356 PISDQ9UG56 409 aa4.35□□□□□ -1.71
CASP4-213ENST00000534356 AURKCQ9UQB9 309 aa4.35□□□□□ -1.71
CASP4-213ENST00000534356 WDR45Q9Y484 360 aa4.35□□□□□ -1.71
CASP4-213ENST00000534356 ANKRD36A6QL64 1941 aa4.34□□□□□ -1.71
CASP4-213ENST00000534356 PRRC2CQ9Y520 2896 aaKnown RBP4.34□□□□□ -1.71
CASP4-213ENST00000534356 FBN2P35556 2912 aa4.34□□□□□ -1.71
CASP4-213ENST00000534356 SYNJ2BP-COX16A0A087WUM0 186 aa4.34□□□□□ -1.71
CASP4-213ENST00000534356 PPIAL4CA0A0B4J2A2 164 aa4.34□□□□□ -1.71
CASP4-213ENST00000534356 YKT6O15498 198 aa4.34□□□□□ -1.71
CASP4-213ENST00000534356 POLR2DO15514 142 aaKnown RBP4.34□□□□□ -1.71
CASP4-213ENST00000534356 EMC8O43402 210 aa4.34□□□□□ -1.71
CASP4-213ENST00000534356 B3GALNT1O75752 331 aa4.34□□□□□ -1.71
CASP4-213ENST00000534356 KRT6AP02538 564 aa4.34□□□□□ -1.71
CASP4-213ENST00000534356 KRT6BP04259 564 aa4.34□□□□□ -1.71
CASP4-213ENST00000534356 PPIAL4GP0DN37 164 aa4.34□□□□□ -1.71
CASP4-213ENST00000534356 KRT6CP48668 564 aa4.34□□□□□ -1.71
CASP4-213ENST00000534356 HERPUD1Q15011 391 aa4.34□□□□□ -1.71
CASP4-213ENST00000534356 TMEM41BQ5BJD5 291 aa4.34□□□□□ -1.71
CASP4-213ENST00000534356 FAHD2BQ6P2I3 314 aaPredicted RBP4.34□□□□□ -1.71
CASP4-213ENST00000534356 APTXQ7Z2E3 356 aaKnown RBP4.34□□□□□ -1.71
CASP4-213ENST00000534356 TAC4Q86UU9 113 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms