RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 DNAJC8O75937 253 aaPredicted RBP11.64□□□□□ -0.55
CAPN1-227ENST00000533909 SLC2A10O95528 541 aa11.64□□□□□ -0.55
CAPN1-227ENST00000533909 CELA3BP08861 270 aa11.64□□□□□ -0.55
CAPN1-227ENST00000533909 DANCRP0C864 163 aa11.64□□□□□ -0.55
CAPN1-227ENST00000533909 CD99P14209 185 aa11.64□□□□□ -0.55
CAPN1-227ENST00000533909 NPR2P20594 1047 aa11.64□□□□□ -0.55
CAPN1-227ENST00000533909 APOBEC3AP31941 199 aaPredicted RBP11.64□□□□□ -0.55
CAPN1-227ENST00000533909 OMPP47874 163 aa11.64□□□□□ -0.55
CAPN1-227ENST00000533909 MS4A2Q01362 244 aa11.64□□□□□ -0.55
CAPN1-227ENST00000533909 GALK2Q01415 458 aa11.64□□□□□ -0.55
CAPN1-227ENST00000533909 PLP2Q04941 152 aa11.64□□□□□ -0.55
CAPN1-227ENST00000533909 FMODQ06828 376 aa11.64□□□□□ -0.55
CAPN1-227ENST00000533909 TRAP1Q12931 704 aaKnown RBP11.64□□□□□ -0.55
CAPN1-227ENST00000533909 FLOT2Q14254 428 aa11.64□□□□□ -0.55
CAPN1-227ENST00000533909 SGCAQ16586 387 aa11.64□□□□□ -0.55
CAPN1-227ENST00000533909 HIST3H3Q16695 136 aa11.64□□□□□ -0.55
CAPN1-227ENST00000533909 PGGHGQ32M88 737 aa11.64□□□□□ -0.55
CAPN1-227ENST00000533909 VHLLQ6RSH7 139 aa11.64□□□□□ -0.55
CAPN1-227ENST00000533909 B3GLCTQ6Y288 498 aa11.64□□□□□ -0.55
CAPN1-227ENST00000533909 YTHDF3Q7Z739 585 aaKnown RBP11.64□□□□□ -0.55
CAPN1-227ENST00000533909 SKA3Q8IX90 412 aa11.64□□□□□ -0.55
CAPN1-227ENST00000533909 LRRC18Q8N456 261 aa11.64□□□□□ -0.55
CAPN1-227ENST00000533909 LINC00471Q8N535 108 aa11.64□□□□□ -0.55
CAPN1-227ENST00000533909 HDAC2Q92769 488 aaKnown RBP11.64□□□□□ -0.55
CAPN1-227ENST00000533909 KCNK17Q96T54 332 aa11.64□□□□□ -0.55
CAPN1-227ENST00000533909 SH3GL3Q99963 347 aa11.64□□□□□ -0.55
CAPN1-227ENST00000533909 TRAF4Q9BUZ4 470 aaPredicted RBP11.64□□□□□ -0.55
CAPN1-227ENST00000533909 REEP1Q9H902 201 aa11.64□□□□□ -0.55
CAPN1-227ENST00000533909 SEC61A2Q9H9S3 476 aa11.64□□□□□ -0.55
CAPN1-227ENST00000533909 CCNB1IP1Q9NPC3 277 aa11.64□□□□□ -0.55
CAPN1-227ENST00000533909 CBLN4Q9NTU7 201 aa11.64□□□□□ -0.55
CAPN1-227ENST00000533909 IL20RAQ9UHF4 553 aa11.64□□□□□ -0.55
CAPN1-227ENST00000533909 ADAM18Q9Y3Q7 739 aa11.64□□□□□ -0.55
CAPN1-227ENST00000533909 RAI1Q7Z5J4 1906 aaPredicted RBP11.63□□□□□ -0.55
CAPN1-227ENST00000533909 ACANP16112 2415 aa11.63□□□□□ -0.55
CAPN1-227ENST00000533909 A0A1W2PPL8 197 aa11.63□□□□□ -0.55
CAPN1-227ENST00000533909 TCRBV5S2A0A599 114 aa11.63□□□□□ -0.55
CAPN1-227ENST00000533909 ZNF503-AS2A6NEH8 195 aa11.63□□□□□ -0.55
CAPN1-227ENST00000533909 MGRN1O60291 552 aa11.63□□□□□ -0.55
CAPN1-227ENST00000533909 ATP5HO75947 161 aa11.63□□□□□ -0.55
CAPN1-227ENST00000533909 IGLV1-44P01699 117 aa11.63□□□□□ -0.55
CAPN1-227ENST00000533909 HOXB6P17509 224 aaKnown RBP11.63□□□□□ -0.55
CAPN1-227ENST00000533909 FPR3P25089 353 aa11.63□□□□□ -0.55
CAPN1-227ENST00000533909 NOS3P29474 1203 aa11.63□□□□□ -0.55
CAPN1-227ENST00000533909 SLC6A6P31641 620 aa11.63□□□□□ -0.55
CAPN1-227ENST00000533909 CDKN1AP38936 164 aa11.63□□□□□ -0.55
CAPN1-227ENST00000533909 LIMS1P48059 325 aa11.63□□□□□ -0.55
CAPN1-227ENST00000533909 RPS6KA3P51812 740 aa11.63□□□□□ -0.55
CAPN1-227ENST00000533909 ADAM8P78325 824 aa11.63□□□□□ -0.55
CAPN1-227ENST00000533909 HSF2Q03933 536 aa11.63□□□□□ -0.55
CAPN1-227ENST00000533909 NRN1LQ496H8 165 aa11.63□□□□□ -0.55
CAPN1-227ENST00000533909 IQCCQ4KMZ1 466 aa11.63□□□□□ -0.55
CAPN1-227ENST00000533909 C10orf128Q5T292 105 aa11.63□□□□□ -0.55
CAPN1-227ENST00000533909 GPR139Q6DWJ6 353 aa11.63□□□□□ -0.55
CAPN1-227ENST00000533909 SMARCD3Q6STE5 483 aa11.63□□□□□ -0.55
CAPN1-227ENST00000533909 DTX2Q86UW9 622 aa11.63□□□□□ -0.55
CAPN1-227ENST00000533909 SPATA24Q86W54 205 aa11.63□□□□□ -0.55
CAPN1-227ENST00000533909 LRRC75AQ8NAA5 344 aa11.63□□□□□ -0.55
CAPN1-227ENST00000533909 WFDC11Q8NEX6 87 aa11.63□□□□□ -0.55
CAPN1-227ENST00000533909 ZNF519Q8TB69 540 aa11.63□□□□□ -0.55
CAPN1-227ENST00000533909 GNPDA2Q8TDQ7 276 aa11.63□□□□□ -0.55
CAPN1-227ENST00000533909 FBXO17Q96EF6 278 aa11.63□□□□□ -0.55
CAPN1-227ENST00000533909 LRMDAQ9H2I8 198 aa11.63□□□□□ -0.55
CAPN1-227ENST00000533909 RERGLQ9H628 205 aa11.63□□□□□ -0.55
CAPN1-227ENST00000533909 SIAEQ9HAT2 523 aa11.63□□□□□ -0.55
CAPN1-227ENST00000533909 B3GNT2Q9NY97 397 aa11.63□□□□□ -0.55
CAPN1-227ENST00000533909 SIGLEC7Q9Y286 467 aa11.63□□□□□ -0.55
CAPN1-227ENST00000533909 PMF1-BGLAPU3KQ54 211 aa11.63□□□□□ -0.55
CAPN1-227ENST00000533909 IGHV2OR16-5A0A0B4J2B6 119 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 TEX13CA0A0J9YWL9 993 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 IQCMA0A1B0GVH7 501 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 DHRS12A0PJE2 317 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 AQP12BA6NM10 295 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 H7C1C5 153 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 GNGT2O14610 69 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 AHCYL1O43865 530 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 CCNB2O95067 398 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 PTHP01270 115 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 PATE4P0C8F1 98 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 RAP2AP10114 183 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 SDHAP31040 664 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 CDAP32320 146 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 MAGEA2P43356 314 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 SNRPD2P62316 118 aaKnown RBP11.62□□□□□ -0.55
CAPN1-227ENST00000533909 LCN6P62502 163 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 MRPS34P82930 218 aaKnown RBP11.62□□□□□ -0.55
CAPN1-227ENST00000533909 KRR1Q13601 381 aaKnown RBP11.62□□□□□ -0.55
CAPN1-227ENST00000533909 FHL1Q13642 323 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 DAG1Q14118 895 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 RAB39AQ14964 217 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 OR2T5Q6IEZ7 315 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 DPY19L2P2Q6ZN68 376 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 ZER1Q7Z7L7 766 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 ADCK1Q86TW2 530 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 JAZF1Q86VZ6 243 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 AQP12AQ8IXF9 295 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 OR52L1Q8NGH7 329 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 OR2T29Q8NH02 315 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 HTRA1Q92743 480 aa11.62□□□□□ -0.55
CAPN1-227ENST00000533909 MS4A3Q96HJ5 214 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms