RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 BSPH1Q075Z2 132 aa10.46□□□□□ -0.73
SSBP3-214ENST00000533209 THEM4Q5T1C6 240 aa10.46□□□□□ -0.73
SSBP3-214ENST00000533209 RPL13AP3Q6NVV1 102 aa10.46□□□□□ -0.73
SSBP3-214ENST00000533209 SHQ1Q6PI26 577 aaKnown RBP10.46□□□□□ -0.73
SSBP3-214ENST00000533209 KLHL17Q6TDP4 642 aa10.46□□□□□ -0.73
SSBP3-214ENST00000533209 PTCHD4Q6ZW05 846 aa10.46□□□□□ -0.73
SSBP3-214ENST00000533209 CCDC36Q8IYA8 594 aa10.46□□□□□ -0.73
SSBP3-214ENST00000533209 SLC22A24Q8N4F4 322 aa10.46□□□□□ -0.73
SSBP3-214ENST00000533209 PYDC1Q8WXC3 89 aa10.46□□□□□ -0.73
SSBP3-214ENST00000533209 LRTOMTQ8WZ04 291 aa10.46□□□□□ -0.73
SSBP3-214ENST00000533209 NSMAFQ92636 917 aa10.46□□□□□ -0.73
SSBP3-214ENST00000533209 NRGNQ92686 78 aa10.46□□□□□ -0.73
SSBP3-214ENST00000533209 HTRA1Q92743 480 aa10.46□□□□□ -0.73
SSBP3-214ENST00000533209 NRBF2Q96F24 287 aa10.46□□□□□ -0.73
SSBP3-214ENST00000533209 RAB3IPQ96QF0 476 aaPredicted RBP10.46□□□□□ -0.73
SSBP3-214ENST00000533209 RBP7Q96R05 134 aa10.46□□□□□ -0.73
SSBP3-214ENST00000533209 IFT27Q9BW83 186 aa10.46□□□□□ -0.73
SSBP3-214ENST00000533209 LIME1Q9H400 295 aa10.46□□□□□ -0.73
SSBP3-214ENST00000533209 DENND2DQ9H6A0 471 aaPredicted RBP10.46□□□□□ -0.73
SSBP3-214ENST00000533209 ESRP2Q9H6T0 727 aaKnown RBP10.46□□□□□ -0.73
SSBP3-214ENST00000533209 B3GNT2Q9NY97 397 aa10.46□□□□□ -0.73
SSBP3-214ENST00000533209 ZNF224Q9NZL3 707 aa10.46□□□□□ -0.73
SSBP3-214ENST00000533209 CRNNQ9UBG3 495 aaPredicted RBP10.46□□□□□ -0.73
SSBP3-214ENST00000533209 REV1Q9UBZ9 1251 aa10.46□□□□□ -0.73
SSBP3-214ENST00000533209 NAV2Q8IVL1 2488 aa10.45□□□□□ -0.74
SSBP3-214ENST00000533209 H3BNX3 289 aa10.45□□□□□ -0.74
SSBP3-214ENST00000533209 M0R1B8 84 aa10.45□□□□□ -0.74
SSBP3-214ENST00000533209 BHLHE40O14503 412 aa10.45□□□□□ -0.74
SSBP3-214ENST00000533209 IDH3BO43837 385 aa10.45□□□□□ -0.74
SSBP3-214ENST00000533209 SOX14O95416 240 aa10.45□□□□□ -0.74
SSBP3-214ENST00000533209 HLA-HP01893 362 aa10.45□□□□□ -0.74
SSBP3-214ENST00000533209 CD3EP07766 207 aa10.45□□□□□ -0.74
SSBP3-214ENST00000533209 OR8G3PP0DMU2 310 aa10.45□□□□□ -0.74
SSBP3-214ENST00000533209 FCGR1AP12314 374 aa10.45□□□□□ -0.74
SSBP3-214ENST00000533209 ANXA8P13928 327 aa10.45□□□□□ -0.74
SSBP3-214ENST00000533209 PAX7P23759 505 aa10.45□□□□□ -0.74
SSBP3-214ENST00000533209 FASP25445 335 aa10.45□□□□□ -0.74
SSBP3-214ENST00000533209 CD40P25942 277 aa10.45□□□□□ -0.74
SSBP3-214ENST00000533209 CDAP32320 146 aa10.45□□□□□ -0.74
SSBP3-214ENST00000533209 ZNF84P51523 738 aa10.45□□□□□ -0.74
SSBP3-214ENST00000533209 MRPS34P82930 218 aaKnown RBP10.45□□□□□ -0.74
SSBP3-214ENST00000533209 COX10Q12887 443 aa10.45□□□□□ -0.74
SSBP3-214ENST00000533209 CLEC12AQ5QGZ9 265 aa10.45□□□□□ -0.74
SSBP3-214ENST00000533209 TMEM108Q6UXF1 575 aa10.45□□□□□ -0.74
SSBP3-214ENST00000533209 ZNF704Q6ZNC4 412 aaPredicted RBP10.45□□□□□ -0.74
SSBP3-214ENST00000533209 FOXL2NBQ6ZUU3 175 aa10.45□□□□□ -0.74
SSBP3-214ENST00000533209 AMIGO2Q86SJ2 522 aa10.45□□□□□ -0.74
SSBP3-214ENST00000533209 ADCK1Q86TW2 530 aa10.45□□□□□ -0.74
SSBP3-214ENST00000533209 MDP1Q86V88 176 aa10.45□□□□□ -0.74
SSBP3-214ENST00000533209 SKA3Q8IX90 412 aa10.45□□□□□ -0.74
SSBP3-214ENST00000533209 FAM169BQ8N8A8 192 aa10.45□□□□□ -0.74
SSBP3-214ENST00000533209 OR52L1Q8NGH7 329 aa10.45□□□□□ -0.74
SSBP3-214ENST00000533209 OR5K1Q8NHB7 308 aa10.45□□□□□ -0.74
SSBP3-214ENST00000533209 LILRB1Q8NHL6 650 aaPredicted RBP10.45□□□□□ -0.74
SSBP3-214ENST00000533209 FGFBP3Q8TAT2 258 aa10.45□□□□□ -0.74
SSBP3-214ENST00000533209 NABP1Q96AH0 204 aa10.45□□□□□ -0.74
SSBP3-214ENST00000533209 SYT4Q9H2B2 425 aa10.45□□□□□ -0.74
SSBP3-214ENST00000533209 NOX3Q9HBY0 568 aa10.45□□□□□ -0.74
SSBP3-214ENST00000533209 VSX1Q9NZR4 365 aaPredicted RBP10.45□□□□□ -0.74
SSBP3-214ENST00000533209 RNF115Q9Y4L5 304 aa10.45□□□□□ -0.74
SSBP3-214ENST00000533209 ROS1P08922 2347 aa10.45□□□□□ -0.74
SSBP3-214ENST00000533209 AKAP6Q13023 2319 aa10.45□□□□□ -0.74
SSBP3-214ENST00000533209 CADP27708 2225 aa10.44□□□□□ -0.74
SSBP3-214ENST00000533209 IGHV1-18A0A0C4DH31 117 aa10.44□□□□□ -0.74
SSBP3-214ENST00000533209 SHISA9B4DS77 424 aa10.44□□□□□ -0.74
SSBP3-214ENST00000533209 ABCD4O14678 606 aa10.44□□□□□ -0.74
SSBP3-214ENST00000533209 IGKV3-15P01624 115 aa10.44□□□□□ -0.74
SSBP3-214ENST00000533209 IGLV1-44P01699 117 aa10.44□□□□□ -0.74
SSBP3-214ENST00000533209 CBR1P16152 277 aa10.44□□□□□ -0.74
SSBP3-214ENST00000533209 HIST1H1CP16403 213 aaKnown RBP10.44□□□□□ -0.74
SSBP3-214ENST00000533209 CTLA4P16410 223 aa10.44□□□□□ -0.74
SSBP3-214ENST00000533209 PTAFRP25105 342 aa10.44□□□□□ -0.74
SSBP3-214ENST00000533209 CAPZA2P47755 286 aa10.44□□□□□ -0.74
SSBP3-214ENST00000533209 ARHGDIAP52565 204 aa10.44□□□□□ -0.74
SSBP3-214ENST00000533209 SPOCK1Q08629 439 aa10.44□□□□□ -0.74
SSBP3-214ENST00000533209 ETFDHQ16134 617 aa10.44□□□□□ -0.74
SSBP3-214ENST00000533209 ZSCAN26Q16670 478 aa10.44□□□□□ -0.74
SSBP3-214ENST00000533209 C3orf36Q3SXR2 165 aa10.44□□□□□ -0.74
SSBP3-214ENST00000533209 SLC36A3Q495N2 470 aa10.44□□□□□ -0.74
SSBP3-214ENST00000533209 NRN1LQ496H8 165 aa10.44□□□□□ -0.74
SSBP3-214ENST00000533209 SLC35F1Q5T1Q4 408 aa10.44□□□□□ -0.74
SSBP3-214ENST00000533209 FAHD1Q6P587 224 aa10.44□□□□□ -0.74
SSBP3-214ENST00000533209 MYPOPQ86VE0 399 aaPredicted RBP10.44□□□□□ -0.74
SSBP3-214ENST00000533209 LNX2Q8N448 690 aa10.44□□□□□ -0.74
SSBP3-214ENST00000533209 KBTBD8Q8NFY9 601 aa10.44□□□□□ -0.74
SSBP3-214ENST00000533209 OR4K13Q8NH42 304 aa10.44□□□□□ -0.74
SSBP3-214ENST00000533209 NEUROG1Q92886 237 aa10.44□□□□□ -0.74
SSBP3-214ENST00000533209 ZNF75AQ96N20 296 aa10.44□□□□□ -0.74
SSBP3-214ENST00000533209 SLC38A2Q96QD8 506 aa10.44□□□□□ -0.74
SSBP3-214ENST00000533209 SNX18Q96RF0 628 aa10.44□□□□□ -0.74
SSBP3-214ENST00000533209 NMNAT3Q96T66 252 aa10.44□□□□□ -0.74
SSBP3-214ENST00000533209 SH3GL3Q99963 347 aa10.44□□□□□ -0.74
SSBP3-214ENST00000533209 BDH2Q9BUT1 245 aa10.44□□□□□ -0.74
SSBP3-214ENST00000533209 TSSK6Q9BXA6 273 aa10.44□□□□□ -0.74
SSBP3-214ENST00000533209 SIAEQ9HAT2 523 aa10.44□□□□□ -0.74
SSBP3-214ENST00000533209 TBC1D23Q9NUY8 699 aa10.44□□□□□ -0.74
SSBP3-214ENST00000533209 MGRN1O60291 552 aa10.43□□□□□ -0.74
SSBP3-214ENST00000533209 SLC16A7O60669 478 aa10.43□□□□□ -0.74
SSBP3-214ENST00000533209 ENTPD5O75356 428 aa10.43□□□□□ -0.74
SSBP3-214ENST00000533209 FARS2O95363 451 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms