RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 LRRC75AQ8NAA5 344 aa26.17■■□□□ 1.78
SSSCA1-207ENST00000533115 FAM168AQ92567 244 aa26.17■■□□□ 1.78
SSSCA1-207ENST00000533115 TNFRSF13CQ96RJ3 184 aa26.17■■□□□ 1.78
SSSCA1-207ENST00000533115 KCNK17Q96T54 332 aa26.17■■□□□ 1.78
SSSCA1-207ENST00000533115 VRK1Q99986 396 aaPredicted RBP26.17■■□□□ 1.78
SSSCA1-207ENST00000533115 GORASP2Q9H8Y8 452 aa26.17■■□□□ 1.78
SSSCA1-207ENST00000533115 ZNF346Q9UL40 294 aaKnown RBP26.17■■□□□ 1.78
SSSCA1-207ENST00000533115 FAM32AQ9Y421 112 aaKnown RBP26.17■■□□□ 1.78
SSSCA1-207ENST00000533115 FKBP7Q9Y680 259 aa26.17■■□□□ 1.78
SSSCA1-207ENST00000533115 hCG_2039718K7EN88 272 aa26.16■■□□□ 1.78
SSSCA1-207ENST00000533115 LY6HO94772 140 aa26.16■■□□□ 1.78
SSSCA1-207ENST00000533115 SLC2A10O95528 541 aa26.16■■□□□ 1.78
SSSCA1-207ENST00000533115 SERPINA5P05154 406 aa26.16■■□□□ 1.78
SSSCA1-207ENST00000533115 HSD17B1P14061 328 aa26.16■■□□□ 1.78
SSSCA1-207ENST00000533115 TCN1P20061 433 aaPredicted RBP26.16■■□□□ 1.78
SSSCA1-207ENST00000533115 PPOXP50336 477 aa26.16■■□□□ 1.78
SSSCA1-207ENST00000533115 FXNQ16595 210 aa26.16■■□□□ 1.78
SSSCA1-207ENST00000533115 KRTAP21-3Q3LHN1 58 aa26.16■■□□□ 1.78
SSSCA1-207ENST00000533115 TMEM53Q6P2H8 277 aa26.16■■□□□ 1.78
SSSCA1-207ENST00000533115 TMPRSS11FQ6ZWK6 438 aa26.16■■□□□ 1.78
SSSCA1-207ENST00000533115 RRM2BQ7LG56 351 aa26.16■■□□□ 1.78
SSSCA1-207ENST00000533115 SLC16A14Q7RTX9 510 aa26.16■■□□□ 1.78
SSSCA1-207ENST00000533115 IGFN1Q86VF2 1251 aa26.16■■□□□ 1.78
SSSCA1-207ENST00000533115 OR13C2Q8NGS9 318 aa26.16■■□□□ 1.78
SSSCA1-207ENST00000533115 NMD3Q96D46 503 aaKnown RBP26.16■■□□□ 1.78
SSSCA1-207ENST00000533115 C7orf34Q96L11 122 aa26.16■■□□□ 1.78
SSSCA1-207ENST00000533115 SMURF2Q9HAU4 748 aa26.16■■□□□ 1.78
SSSCA1-207ENST00000533115 NDUFAF4Q9P032 175 aa26.16■■□□□ 1.78
SSSCA1-207ENST00000533115 H1F0P07305 194 aaKnown RBP26.15■■□□□ 1.78
SSSCA1-207ENST00000533115 CSF3P09919 207 aa26.15■■□□□ 1.78
SSSCA1-207ENST00000533115 NR2C1P13056 603 aa26.15■■□□□ 1.78
SSSCA1-207ENST00000533115 RHCEP18577 417 aa26.15■■□□□ 1.78
SSSCA1-207ENST00000533115 CD47Q08722 323 aa26.15■■□□□ 1.78
SSSCA1-207ENST00000533115 SLC36A2Q495M3 483 aa26.15■■□□□ 1.78
SSSCA1-207ENST00000533115 SVOPLQ8N434 492 aa26.15■■□□□ 1.78
SSSCA1-207ENST00000533115 FAM86B1Q8N7N1 296 aa26.15■■□□□ 1.78
SSSCA1-207ENST00000533115 SLC7A13Q8TCU3 470 aa26.15■■□□□ 1.78
SSSCA1-207ENST00000533115 DOK1Q99704 481 aa26.15■■□□□ 1.78
SSSCA1-207ENST00000533115 ALG12Q9BV10 488 aa26.15■■□□□ 1.78
SSSCA1-207ENST00000533115 RNF121Q9H920 327 aa26.15■■□□□ 1.78
SSSCA1-207ENST00000533115 CMAHPQ9Y471 501 aa26.15■■□□□ 1.78
SSSCA1-207ENST00000533115 A0A1W2PRQ8 180 aa26.14■■□□□ 1.78
SSSCA1-207ENST00000533115 TMEM129A0AVI4 362 aa26.14■■□□□ 1.78
SSSCA1-207ENST00000533115 MGRN1O60291 552 aa26.14■■□□□ 1.78
SSSCA1-207ENST00000533115 SLC25A16P16260 332 aa26.14■■□□□ 1.78
SSSCA1-207ENST00000533115 GPR4P46093 362 aa26.14■■□□□ 1.78
SSSCA1-207ENST00000533115 GALK2Q01415 458 aa26.14■■□□□ 1.78
SSSCA1-207ENST00000533115 FMODQ06828 376 aa26.14■■□□□ 1.78
SSSCA1-207ENST00000533115 DGCR6Q14129 220 aa26.14■■□□□ 1.78
SSSCA1-207ENST00000533115 SAMD4BQ5PRF9 694 aaKnown RBP26.14■■□□□ 1.78
SSSCA1-207ENST00000533115 FAM205BPQ63HN1 556 aa26.14■■□□□ 1.78
SSSCA1-207ENST00000533115 PODNL1Q6PEZ8 512 aa26.14■■□□□ 1.78
SSSCA1-207ENST00000533115 ANKS4BQ8N8V4 417 aa26.14■■□□□ 1.78
SSSCA1-207ENST00000533115 C10orf105Q8TEF2 133 aa26.14■■□□□ 1.78
SSSCA1-207ENST00000533115 TSPAN32Q96QS1 320 aa26.14■■□□□ 1.78
SSSCA1-207ENST00000533115 CDRT15Q96T59 188 aa26.14■■□□□ 1.78
SSSCA1-207ENST00000533115 CD300AQ9UGN4 299 aa26.14■■□□□ 1.78
SSSCA1-207ENST00000533115 MAGEL2Q9UJ55 1249 aa26.14■■□□□ 1.78
SSSCA1-207ENST00000533115 TMEM5Q9Y2B1 443 aa26.14■■□□□ 1.78
SSSCA1-207ENST00000533115 UGT2A1Q9Y4X1 527 aa26.14■■□□□ 1.78
SSSCA1-207ENST00000533115 A0A096LNT2 108 aa26.13■■□□□ 1.77
SSSCA1-207ENST00000533115 IGKV1D-43A0A0B4J1Z2 117 aa26.13■■□□□ 1.77
SSSCA1-207ENST00000533115 CDC42EP2O14613 210 aa26.13■■□□□ 1.77
SSSCA1-207ENST00000533115 MRPS34P82930 218 aaKnown RBP26.13■■□□□ 1.77
SSSCA1-207ENST00000533115 GKAP1Q5VSY0 366 aaPredicted RBP26.13■■□□□ 1.77
SSSCA1-207ENST00000533115 LRRC18Q8N456 261 aa26.13■■□□□ 1.77
SSSCA1-207ENST00000533115 ZNF519Q8TB69 540 aa26.13■■□□□ 1.77
SSSCA1-207ENST00000533115 RBP7Q96R05 134 aa26.13■■□□□ 1.77
SSSCA1-207ENST00000533115 SIAEQ9HAT2 523 aa26.13■■□□□ 1.77
SSSCA1-207ENST00000533115 GPRIN2O60269 458 aa26.12■■□□□ 1.77
SSSCA1-207ENST00000533115 PCSK6P29122 969 aa26.12■■□□□ 1.77
SSSCA1-207ENST00000533115 CDAP32320 146 aa26.12■■□□□ 1.77
SSSCA1-207ENST00000533115 GLRXP35754 106 aa26.12■■□□□ 1.77
SSSCA1-207ENST00000533115 VLDLRP98155 873 aa26.12■■□□□ 1.77
SSSCA1-207ENST00000533115 PPP2R2BQ00005 443 aa26.12■■□□□ 1.77
SSSCA1-207ENST00000533115 ZBED5Q49AG3 693 aa26.12■■□□□ 1.77
SSSCA1-207ENST00000533115 THEM4Q5T1C6 240 aa26.12■■□□□ 1.77
SSSCA1-207ENST00000533115 SLC25A47Q6Q0C1 308 aa26.12■■□□□ 1.77
SSSCA1-207ENST00000533115 C16orf89Q6UX73 402 aa26.12■■□□□ 1.77
SSSCA1-207ENST00000533115 SLC30A7Q8NEW0 376 aa26.12■■□□□ 1.77
SSSCA1-207ENST00000533115 FNDC8Q8TC99 324 aa26.12■■□□□ 1.77
SSSCA1-207ENST00000533115 NSMAFQ92636 917 aa26.12■■□□□ 1.77
SSSCA1-207ENST00000533115 RAB1BQ9H0U4 201 aa26.12■■□□□ 1.77
SSSCA1-207ENST00000533115 NDE1Q9NXR1 346 aa26.12■■□□□ 1.77
SSSCA1-207ENST00000533115 SLC7A8Q9UHI5 535 aa26.12■■□□□ 1.77
SSSCA1-207ENST00000533115 A6NIZ1 184 aa26.11■■□□□ 1.77
SSSCA1-207ENST00000533115 INAFM1C9JVW0 142 aa26.11■■□□□ 1.77
SSSCA1-207ENST00000533115 TP53P04637 393 aaPredicted RBP26.11■■□□□ 1.77
SSSCA1-207ENST00000533115 PDLIM4P50479 330 aa26.11■■□□□ 1.77
SSSCA1-207ENST00000533115 RAP1BP61224 184 aa26.11■■□□□ 1.77
SSSCA1-207ENST00000533115 RPS23P62266 143 aaKnown RBP26.11■■□□□ 1.77
SSSCA1-207ENST00000533115 RAP1AP62834 184 aa26.11■■□□□ 1.77
SSSCA1-207ENST00000533115 MSMPQ1L6U9 139 aa26.11■■□□□ 1.77
SSSCA1-207ENST00000533115 FGD3Q5JSP0 725 aa26.11■■□□□ 1.77
SSSCA1-207ENST00000533115 CLDN22Q8N7P3 220 aa26.11■■□□□ 1.77
SSSCA1-207ENST00000533115 MRPL24Q96A35 216 aaKnown RBP26.11■■□□□ 1.77
SSSCA1-207ENST00000533115 NABP1Q96AH0 204 aa26.11■■□□□ 1.77
SSSCA1-207ENST00000533115 PYURFQ96I23 114 aa26.11■■□□□ 1.77
SSSCA1-207ENST00000533115 FAM46AQ96IP4 442 aaKnown RBP26.11■■□□□ 1.77
SSSCA1-207ENST00000533115 CCT8L2Q96SF2 557 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms