RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 BOD1Q96IK1 185 aa11.04□□□□□ -0.64
COPB1-208ENST00000532088 RBP7Q96R05 134 aa11.04□□□□□ -0.64
COPB1-208ENST00000532088 EMC6Q9BV81 110 aa11.04□□□□□ -0.64
COPB1-208ENST00000532088 CLEC4MQ9H2X3 399 aaPredicted RBP11.04□□□□□ -0.64
COPB1-208ENST00000532088 C12orf49Q9H741 205 aa11.04□□□□□ -0.64
COPB1-208ENST00000532088 ELOVL5Q9NYP7 299 aa11.04□□□□□ -0.64
COPB1-208ENST00000532088 GLTPQ9NZD2 209 aa11.04□□□□□ -0.64
COPB1-208ENST00000532088 HSPE1-MOB4S4R3N1 261 aa11.04□□□□□ -0.64
COPB1-208ENST00000532088 NCOA6Q14686 2063 aaPredicted RBP11.04□□□□□ -0.64
COPB1-208ENST00000532088 SLC22A23A1A5C7 686 aa11.03□□□□□ -0.64
COPB1-208ENST00000532088 PLA2G2AP14555 144 aa11.03□□□□□ -0.64
COPB1-208ENST00000532088 PAICSP22234 425 aaKnown RBP11.03□□□□□ -0.64
COPB1-208ENST00000532088 EPHA2P29317 976 aa11.03□□□□□ -0.64
COPB1-208ENST00000532088 CRABP1P29762 137 aa11.03□□□□□ -0.64
COPB1-208ENST00000532088 CAPGP40121 348 aa11.03□□□□□ -0.64
COPB1-208ENST00000532088 CDKN2AP42771 156 aaKnown RBP11.03□□□□□ -0.64
COPB1-208ENST00000532088 CENPAP49450 140 aa11.03□□□□□ -0.64
COPB1-208ENST00000532088 SH3BGRP55822 239 aaPredicted RBP11.03□□□□□ -0.64
COPB1-208ENST00000532088 RUNX1T1Q06455 604 aa11.03□□□□□ -0.64
COPB1-208ENST00000532088 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.03□□□□□ -0.64
COPB1-208ENST00000532088 P2RY6Q15077 328 aa11.03□□□□□ -0.64
COPB1-208ENST00000532088 SNAPC1Q16533 368 aa11.03□□□□□ -0.64
COPB1-208ENST00000532088 ZIK1Q3SY52 487 aaPredicted RBP11.03□□□□□ -0.64
COPB1-208ENST00000532088 SLC25A30Q5SVS4 291 aa11.03□□□□□ -0.64
COPB1-208ENST00000532088 TSPO2Q5TGU0 170 aa11.03□□□□□ -0.64
COPB1-208ENST00000532088 PTCHD4Q6ZW05 846 aa11.03□□□□□ -0.64
COPB1-208ENST00000532088 GPR137CQ8N3F9 429 aa11.03□□□□□ -0.64
COPB1-208ENST00000532088 ZNF808Q8N4W9 903 aaPredicted RBP11.03□□□□□ -0.64
COPB1-208ENST00000532088 IQCF1Q8N6M8 205 aa11.03□□□□□ -0.64
COPB1-208ENST00000532088 RELL2Q8NC24 303 aaPredicted RBP11.03□□□□□ -0.64
COPB1-208ENST00000532088 SLC37A3Q8NCC5 494 aa11.03□□□□□ -0.64
COPB1-208ENST00000532088 OR52E2Q8NGJ4 325 aa11.03□□□□□ -0.64
COPB1-208ENST00000532088 OR8J1Q8NGP2 316 aa11.03□□□□□ -0.64
COPB1-208ENST00000532088 OR6N1Q8NGY5 312 aa11.03□□□□□ -0.64
COPB1-208ENST00000532088 OR4K13Q8NH42 304 aa11.03□□□□□ -0.64
COPB1-208ENST00000532088 PLEKHA8Q96JA3 519 aa11.03□□□□□ -0.64
COPB1-208ENST00000532088 APOL4Q9BPW4 351 aa11.03□□□□□ -0.64
COPB1-208ENST00000532088 ADI1Q9BV57 179 aa11.03□□□□□ -0.64
COPB1-208ENST00000532088 OR10A4Q9H209 315 aa11.03□□□□□ -0.64
COPB1-208ENST00000532088 SLC7A10Q9NS82 523 aa11.03□□□□□ -0.64
COPB1-208ENST00000532088 ASB6Q9NWX5 421 aa11.03□□□□□ -0.64
COPB1-208ENST00000532088 UPB1Q9UBR1 384 aa11.03□□□□□ -0.64
COPB1-208ENST00000532088 RALYQ9UKM9 306 aaKnown RBP11.03□□□□□ -0.64
COPB1-208ENST00000532088 GMPPBQ9Y5P6 360 aa11.03□□□□□ -0.64
COPB1-208ENST00000532088 FKBP7Q9Y680 259 aa11.03□□□□□ -0.64
COPB1-208ENST00000532088 ZNF587BE7ETH6 402 aa11.02□□□□□ -0.65
COPB1-208ENST00000532088 J3QKU1 62 aa11.02□□□□□ -0.65
COPB1-208ENST00000532088 COX5AP20674 150 aa11.02□□□□□ -0.65
COPB1-208ENST00000532088 BMP5P22003 454 aa11.02□□□□□ -0.65
COPB1-208ENST00000532088 MPGP29372 298 aa11.02□□□□□ -0.65
COPB1-208ENST00000532088 ASCL1P50553 236 aa11.02□□□□□ -0.65
COPB1-208ENST00000532088 AQP4P55087 323 aa11.02□□□□□ -0.65
COPB1-208ENST00000532088 SNRPGP62308 76 aaKnown RBP11.02□□□□□ -0.65
COPB1-208ENST00000532088 SLC35F1Q5T1Q4 408 aa11.02□□□□□ -0.65
COPB1-208ENST00000532088 TMEM236Q5W0B7 351 aa11.02□□□□□ -0.65
COPB1-208ENST00000532088 LEG1Q6P5S2 330 aa11.02□□□□□ -0.65
COPB1-208ENST00000532088 SLC25A47Q6Q0C1 308 aa11.02□□□□□ -0.65
COPB1-208ENST00000532088 IZUMO2Q6UXV1 221 aa11.02□□□□□ -0.65
COPB1-208ENST00000532088 FOXL2NBQ6ZUU3 175 aa11.02□□□□□ -0.65
COPB1-208ENST00000532088 NCCRP1Q6ZVX7 275 aaPredicted RBP11.02□□□□□ -0.65
COPB1-208ENST00000532088 ZNF627Q7L945 461 aa11.02□□□□□ -0.65
COPB1-208ENST00000532088 ZBTB46Q86UZ6 589 aa11.02□□□□□ -0.65
COPB1-208ENST00000532088 LIX1LQ8IVB5 337 aa11.02□□□□□ -0.65
COPB1-208ENST00000532088 WDFY1Q8IWB7 410 aa11.02□□□□□ -0.65
COPB1-208ENST00000532088 GABRG1Q8N1C3 465 aa11.02□□□□□ -0.65
COPB1-208ENST00000532088 SETD9Q8NE22 299 aa11.02□□□□□ -0.65
COPB1-208ENST00000532088 C1orf162Q8NEQ5 155 aaPredicted RBP11.02□□□□□ -0.65
COPB1-208ENST00000532088 SDR9C7Q8NEX9 313 aa11.02□□□□□ -0.65
COPB1-208ENST00000532088 TFAP2CQ92754 450 aa11.02□□□□□ -0.65
COPB1-208ENST00000532088 MCHR2Q969V1 340 aa11.02□□□□□ -0.65
COPB1-208ENST00000532088 LRRC46Q96FV0 321 aa11.02□□□□□ -0.65
COPB1-208ENST00000532088 NMNAT3Q96T66 252 aa11.02□□□□□ -0.65
COPB1-208ENST00000532088 ULBP2Q9BZM5 246 aa11.02□□□□□ -0.65
COPB1-208ENST00000532088 NMNAT2Q9BZQ4 307 aa11.02□□□□□ -0.65
COPB1-208ENST00000532088 RACGAP1Q9H0H5 632 aa11.02□□□□□ -0.65
COPB1-208ENST00000532088 GPR35Q9HC97 309 aa11.02□□□□□ -0.65
COPB1-208ENST00000532088 TVP23BQ9NYZ1 205 aa11.02□□□□□ -0.65
COPB1-208ENST00000532088 PRSS50Q9UI38 385 aa11.02□□□□□ -0.65
COPB1-208ENST00000532088 CFAP46Q8IYW2 2715 aa11.01□□□□□ -0.65
COPB1-208ENST00000532088 PRRC2CQ9Y520 2896 aaKnown RBP11.01□□□□□ -0.65
COPB1-208ENST00000532088 OR6C68A6NDL8 312 aa11.01□□□□□ -0.65
COPB1-208ENST00000532088 WIPF3A6NGB9 483 aa11.01□□□□□ -0.65
COPB1-208ENST00000532088 PRR23D1E9PI22 279 aaPredicted RBP11.01□□□□□ -0.65
COPB1-208ENST00000532088 DHHO43323 396 aa11.01□□□□□ -0.65
COPB1-208ENST00000532088 UPK3AO75631 287 aa11.01□□□□□ -0.65
COPB1-208ENST00000532088 KRT33AO76009 404 aa11.01□□□□□ -0.65
COPB1-208ENST00000532088 QDPRP09417 244 aa11.01□□□□□ -0.65
COPB1-208ENST00000532088 PRR23D2P0DMB1 279 aaPredicted RBP11.01□□□□□ -0.65
COPB1-208ENST00000532088 EDNRAP25101 427 aa11.01□□□□□ -0.65
COPB1-208ENST00000532088 GSTT1P30711 240 aa11.01□□□□□ -0.65
COPB1-208ENST00000532088 ZNF84P51523 738 aa11.01□□□□□ -0.65
COPB1-208ENST00000532088 BLVRAP53004 296 aa11.01□□□□□ -0.65
COPB1-208ENST00000532088 TEKQ02763 1124 aa11.01□□□□□ -0.65
COPB1-208ENST00000532088 TGFBR3Q03167 851 aa11.01□□□□□ -0.65
COPB1-208ENST00000532088 CD47Q08722 323 aa11.01□□□□□ -0.65
COPB1-208ENST00000532088 CRMP1Q14194 572 aa11.01□□□□□ -0.65
COPB1-208ENST00000532088 SLC35D3Q5M8T2 416 aa11.01□□□□□ -0.65
COPB1-208ENST00000532088 ZNF691Q5VV52 312 aa11.01□□□□□ -0.65
COPB1-208ENST00000532088 MEDAGQ5VYS4 303 aa11.01□□□□□ -0.65
COPB1-208ENST00000532088 NXNL2Q5VZ03 156 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms