RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 SNX13Q9Y5W8 968 aa11.01□□□□□ -0.65
TM9SF1-211ENST00000531406 ANK2Q01484 3957 aa11.01□□□□□ -0.65
TM9SF1-211ENST00000531406 HEATR1Q9H583 2144 aaKnown RBP11□□□□□ -0.65
TM9SF1-211ENST00000531406 ELOVL7A1L3X0 281 aa11□□□□□ -0.65
TM9SF1-211ENST00000531406 B4DSR2 109 aa11□□□□□ -0.65
TM9SF1-211ENST00000531406 C11orf98E9PRG8 122 aa11□□□□□ -0.65
TM9SF1-211ENST00000531406 M0R3H8 397 aa11□□□□□ -0.65
TM9SF1-211ENST00000531406 HPXP02790 462 aa11□□□□□ -0.65
TM9SF1-211ENST00000531406 PATE4P0C8F1 98 aa11□□□□□ -0.65
TM9SF1-211ENST00000531406 ADORA3P0DMS8 318 aa11□□□□□ -0.65
TM9SF1-211ENST00000531406 COL8A2P25067 703 aa11□□□□□ -0.65
TM9SF1-211ENST00000531406 PCGF2P35227 344 aa11□□□□□ -0.65
TM9SF1-211ENST00000531406 GPR6P46095 362 aaPredicted RBP11□□□□□ -0.65
TM9SF1-211ENST00000531406 BIDP55957 195 aa11□□□□□ -0.65
TM9SF1-211ENST00000531406 PCBP3P57721 371 aaKnown RBP11□□□□□ -0.65
TM9SF1-211ENST00000531406 RPS23P62266 143 aaKnown RBP11□□□□□ -0.65
TM9SF1-211ENST00000531406 GALK2Q01415 458 aa11□□□□□ -0.65
TM9SF1-211ENST00000531406 TRAP1Q12931 704 aaKnown RBP11□□□□□ -0.65
TM9SF1-211ENST00000531406 FLOT2Q14254 428 aa11□□□□□ -0.65
TM9SF1-211ENST00000531406 TRIM25Q14258 630 aaKnown RBP11□□□□□ -0.65
TM9SF1-211ENST00000531406 RAB39AQ14964 217 aa11□□□□□ -0.65
TM9SF1-211ENST00000531406 MAD2L1BPQ15013 274 aaPredicted RBP11□□□□□ -0.65
TM9SF1-211ENST00000531406 NPTX1Q15818 432 aa11□□□□□ -0.65
TM9SF1-211ENST00000531406 ZNF613Q6PF04 617 aa11□□□□□ -0.65
TM9SF1-211ENST00000531406 PIWIL3Q7Z3Z3 882 aaKnown RBP11□□□□□ -0.65
TM9SF1-211ENST00000531406 CARM1Q86X55 608 aa11□□□□□ -0.65
TM9SF1-211ENST00000531406 CALHM3Q86XJ0 350 aa11□□□□□ -0.65
TM9SF1-211ENST00000531406 PTOV1Q86YD1 416 aa11□□□□□ -0.65
TM9SF1-211ENST00000531406 SKA3Q8IX90 412 aa11□□□□□ -0.65
TM9SF1-211ENST00000531406 C11orf65Q8NCR3 313 aa11□□□□□ -0.65
TM9SF1-211ENST00000531406 OR5J2Q8NH18 312 aa11□□□□□ -0.65
TM9SF1-211ENST00000531406 FGFBP3Q8TAT2 258 aa11□□□□□ -0.65
TM9SF1-211ENST00000531406 RDH5Q92781 318 aa11□□□□□ -0.65
TM9SF1-211ENST00000531406 UTP4Q969X6 686 aaKnown RBP11□□□□□ -0.65
TM9SF1-211ENST00000531406 ZNF583Q96ND8 569 aa11□□□□□ -0.65
TM9SF1-211ENST00000531406 ARHGDIGQ99819 225 aa11□□□□□ -0.65
TM9SF1-211ENST00000531406 MYEF2Q9P2K5 600 aaKnown RBP11□□□□□ -0.65
TM9SF1-211ENST00000531406 FZR1Q9UM11 496 aa11□□□□□ -0.65
TM9SF1-211ENST00000531406 RRP15Q9Y3B9 282 aaKnown RBP11□□□□□ -0.65
TM9SF1-211ENST00000531406 MALRD1Q5VYJ5 2156 aa10.99□□□□□ -0.65
TM9SF1-211ENST00000531406 CHP2O43745 196 aa10.99□□□□□ -0.65
TM9SF1-211ENST00000531406 OR6A2O95222 327 aa10.99□□□□□ -0.65
TM9SF1-211ENST00000531406 LYPD3O95274 346 aa10.99□□□□□ -0.65
TM9SF1-211ENST00000531406 SERPINA5P05154 406 aa10.99□□□□□ -0.65
TM9SF1-211ENST00000531406 C8BP07358 591 aa10.99□□□□□ -0.65
TM9SF1-211ENST00000531406 PCMT1P22061 227 aa10.99□□□□□ -0.65
TM9SF1-211ENST00000531406 ZP4Q12836 540 aa10.99□□□□□ -0.65
TM9SF1-211ENST00000531406 ZNF74Q16587 644 aa10.99□□□□□ -0.65
TM9SF1-211ENST00000531406 DUSP7Q16829 419 aa10.99□□□□□ -0.65
TM9SF1-211ENST00000531406 MTX3Q5HYI7 312 aa10.99□□□□□ -0.65
TM9SF1-211ENST00000531406 INTS11Q5TA45 600 aaKnown RBP10.99□□□□□ -0.65
TM9SF1-211ENST00000531406 LRFN4Q6PJG9 635 aa10.99□□□□□ -0.65
TM9SF1-211ENST00000531406 SLC35D2Q76EJ3 337 aa10.99□□□□□ -0.65
TM9SF1-211ENST00000531406 DHFR2Q86XF0 187 aa10.99□□□□□ -0.65
TM9SF1-211ENST00000531406 ZNF584Q8IVC4 421 aa10.99□□□□□ -0.65
TM9SF1-211ENST00000531406 SLC22A24Q8N4F4 322 aa10.99□□□□□ -0.65
TM9SF1-211ENST00000531406 FAM156AQ8NDB6 213 aa10.99□□□□□ -0.65
TM9SF1-211ENST00000531406 GPR32P1Q8NGA4 272 aa10.99□□□□□ -0.65
TM9SF1-211ENST00000531406 OR6T1Q8NGN1 323 aa10.99□□□□□ -0.65
TM9SF1-211ENST00000531406 OR6X1Q8NH79 312 aa10.99□□□□□ -0.65
TM9SF1-211ENST00000531406 CLDND2Q8NHS1 167 aa10.99□□□□□ -0.65
TM9SF1-211ENST00000531406 POP5Q969H6 163 aaKnown RBP10.99□□□□□ -0.65
TM9SF1-211ENST00000531406 NSMCE2Q96MF7 247 aa10.99□□□□□ -0.65
TM9SF1-211ENST00000531406 RACGAP1Q9H0H5 632 aa10.99□□□□□ -0.65
TM9SF1-211ENST00000531406 TAS2R5Q9NYW4 299 aa10.99□□□□□ -0.65
TM9SF1-211ENST00000531406 GLTPQ9NZD2 209 aa10.99□□□□□ -0.65
TM9SF1-211ENST00000531406 DUSP13Q9UII6 198 aa10.99□□□□□ -0.65
TM9SF1-211ENST00000531406 POMPQ9Y244 141 aa10.99□□□□□ -0.65
TM9SF1-211ENST00000531406 CPSF4LA6NMK7 179 aaKnown RBP10.98□□□□□ -0.65
TM9SF1-211ENST00000531406 M0QX08 132 aa10.98□□□□□ -0.65
TM9SF1-211ENST00000531406 CH25HO95992 272 aa10.98□□□□□ -0.65
TM9SF1-211ENST00000531406 OPN1SWP03999 348 aa10.98□□□□□ -0.65
TM9SF1-211ENST00000531406 THY1P04216 161 aa10.98□□□□□ -0.65
TM9SF1-211ENST00000531406 OR8G3PP0DMU2 310 aa10.98□□□□□ -0.65
TM9SF1-211ENST00000531406 ITGA2P17301 1181 aa10.98□□□□□ -0.65
TM9SF1-211ENST00000531406 ACHEP22303 614 aa10.98□□□□□ -0.65
TM9SF1-211ENST00000531406 TMEM33P57088 247 aa10.98□□□□□ -0.65
TM9SF1-211ENST00000531406 MRPS11P82912 194 aaKnown RBP10.98□□□□□ -0.65
TM9SF1-211ENST00000531406 VMACQ2NL98 169 aa10.98□□□□□ -0.65
TM9SF1-211ENST00000531406 ENTPD8Q5MY95 495 aa10.98□□□□□ -0.65
TM9SF1-211ENST00000531406 GLCCI1Q86VQ1 547 aa10.98□□□□□ -0.65
TM9SF1-211ENST00000531406 RBM45Q8IUH3 476 aaKnown RBP10.98□□□□□ -0.65
TM9SF1-211ENST00000531406 C10orf67Q8IYJ2 551 aa10.98□□□□□ -0.65
TM9SF1-211ENST00000531406 OR4D11Q8NGI4 311 aa10.98□□□□□ -0.65
TM9SF1-211ENST00000531406 YIPF5Q969M3 257 aa10.98□□□□□ -0.65
TM9SF1-211ENST00000531406 ZNF566Q969W8 418 aa10.98□□□□□ -0.65
TM9SF1-211ENST00000531406 FAM162AQ96A26 154 aa10.98□□□□□ -0.65
TM9SF1-211ENST00000531406 SLC25A44Q96H78 314 aaPredicted RBP10.98□□□□□ -0.65
TM9SF1-211ENST00000531406 RSRC1Q96IZ7 334 aaKnown RBP10.98□□□□□ -0.65
TM9SF1-211ENST00000531406 SH3GL3Q99963 347 aa10.98□□□□□ -0.65
TM9SF1-211ENST00000531406 NARFLQ9H6Q4 476 aa10.98□□□□□ -0.65
TM9SF1-211ENST00000531406 ZNF275Q9NSD4 429 aaPredicted RBP10.98□□□□□ -0.65
TM9SF1-211ENST00000531406 TMEM38BQ9NVV0 291 aa10.98□□□□□ -0.65
TM9SF1-211ENST00000531406 TREM2Q9NZC2 230 aa10.98□□□□□ -0.65
TM9SF1-211ENST00000531406 ACTR3BQ9P1U1 418 aa10.98□□□□□ -0.65
TM9SF1-211ENST00000531406 EGFL7Q9UHF1 273 aa10.98□□□□□ -0.65
TM9SF1-211ENST00000531406 METRNQ9UJH8 293 aa10.98□□□□□ -0.65
TM9SF1-211ENST00000531406 ZNF346Q9UL40 294 aaKnown RBP10.98□□□□□ -0.65
TM9SF1-211ENST00000531406 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.98□□□□□ -0.653e-22■■■■■ 34.5
TM9SF1-211ENST00000531406 A0A1W2PPW3 197 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms