RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 POMZP3Q6PJE2 187 aa10.59□□□□□ -0.71
USF1-208ENST00000528768 YIPF7Q8N8F6 280 aa10.59□□□□□ -0.71
USF1-208ENST00000528768 BMPERQ8N8U9 685 aa10.59□□□□□ -0.71
USF1-208ENST00000528768 ZBTB8BQ8NAP8 495 aaPredicted RBP10.59□□□□□ -0.71
USF1-208ENST00000528768 NFAM1Q8NET5 270 aaPredicted RBP10.59□□□□□ -0.71
USF1-208ENST00000528768 DUSP19Q8WTR2 217 aa10.59□□□□□ -0.71
USF1-208ENST00000528768 SLC25A36Q96CQ1 311 aa10.59□□□□□ -0.71
USF1-208ENST00000528768 DDIT4LQ96D03 193 aa10.59□□□□□ -0.71
USF1-208ENST00000528768 AGAP4Q96P64 663 aa10.59□□□□□ -0.71
USF1-208ENST00000528768 TSPAN32Q96QS1 320 aa10.59□□□□□ -0.71
USF1-208ENST00000528768 INTS14Q96SY0 518 aa10.59□□□□□ -0.71
USF1-208ENST00000528768 SOSTQ9BQB4 213 aa10.59□□□□□ -0.71
USF1-208ENST00000528768 COMMD4Q9H0A8 199 aa10.59□□□□□ -0.71
USF1-208ENST00000528768 PPP1R3EQ9H7J1 279 aa10.59□□□□□ -0.71
USF1-208ENST00000528768 SRA1Q9HD15 236 aaKnown RBP10.59□□□□□ -0.71
USF1-208ENST00000528768 SERINC1Q9NRX5 453 aa10.59□□□□□ -0.71
USF1-208ENST00000528768 CYSLTR2Q9NS75 346 aa10.59□□□□□ -0.71
USF1-208ENST00000528768 SLC22A11Q9NSA0 550 aa10.59□□□□□ -0.71
USF1-208ENST00000528768 OCIAD1Q9NX40 245 aa10.59□□□□□ -0.71
USF1-208ENST00000528768 MRPL39Q9NYK5 338 aaKnown RBP10.59□□□□□ -0.71
USF1-208ENST00000528768 ZNF346Q9UL40 294 aaKnown RBP10.59□□□□□ -0.71
USF1-208ENST00000528768 TBC1D24Q9ULP9 559 aa10.59□□□□□ -0.71
USF1-208ENST00000528768 F8P00451 2351 aa10.58□□□□□ -0.72
USF1-208ENST00000528768 TRBV11-1A0A0K0K1C0 115 aa10.58□□□□□ -0.72
USF1-208ENST00000528768 TMEM72A0PK05 275 aa10.58□□□□□ -0.72
USF1-208ENST00000528768 C9J4A7 227 aa10.58□□□□□ -0.72
USF1-208ENST00000528768 ARHGEF9O43307 516 aa10.58□□□□□ -0.72
USF1-208ENST00000528768 NCR1O76036 304 aa10.58□□□□□ -0.72
USF1-208ENST00000528768 STK17BO94768 372 aa10.58□□□□□ -0.72
USF1-208ENST00000528768 IGHMP01871 453 aa10.58□□□□□ -0.72
USF1-208ENST00000528768 HLA-DQB1P01920 261 aa10.58□□□□□ -0.72
USF1-208ENST00000528768 CD63P08962 238 aa10.58□□□□□ -0.72
USF1-208ENST00000528768 RNF224P0DH78 156 aa10.58□□□□□ -0.72
USF1-208ENST00000528768 TRAPPC2P0DI81 140 aa10.58□□□□□ -0.72
USF1-208ENST00000528768 TRAPPC2BP0DI82 140 aa10.58□□□□□ -0.72
USF1-208ENST00000528768 FGF5P12034 268 aa10.58□□□□□ -0.72
USF1-208ENST00000528768 FKBP2P26885 142 aaKnown RBP10.58□□□□□ -0.72
USF1-208ENST00000528768 COL8A1P27658 744 aa10.58□□□□□ -0.72
USF1-208ENST00000528768 APEX1P27695 318 aaKnown RBP10.58□□□□□ -0.72
USF1-208ENST00000528768 MAP2K3P46734 347 aa10.58□□□□□ -0.72
USF1-208ENST00000528768 ZNF41P51814 821 aaPredicted RBP10.58□□□□□ -0.72
USF1-208ENST00000528768 LTBQ06643 244 aa10.58□□□□□ -0.72
USF1-208ENST00000528768 GXYLT1Q4G148 440 aa10.58□□□□□ -0.72
USF1-208ENST00000528768 LINC01590Q5TEZ4 76 aa10.58□□□□□ -0.72
USF1-208ENST00000528768 EEF1A1P5Q5VTE0 462 aa10.58□□□□□ -0.72
USF1-208ENST00000528768 PWWP2BQ6NUJ5 590 aa10.58□□□□□ -0.72
USF1-208ENST00000528768 PLET1Q6UQ28 207 aa10.58□□□□□ -0.72
USF1-208ENST00000528768 UNQ9370/PRO34162Q6UXP9 181 aa10.58□□□□□ -0.72
USF1-208ENST00000528768 SHISA6Q6ZSJ9 500 aa10.58□□□□□ -0.72
USF1-208ENST00000528768 SSX6Q7RTT6 188 aa10.58□□□□□ -0.72
USF1-208ENST00000528768 NRARPQ7Z6K4 114 aa10.58□□□□□ -0.72
USF1-208ENST00000528768 SCAIQ8N9R8 606 aa10.58□□□□□ -0.72
USF1-208ENST00000528768 TRMT10AQ8TBZ6 339 aaKnown RBP10.58□□□□□ -0.72
USF1-208ENST00000528768 DCLRE1CQ96SD1 692 aaKnown RBP10.58□□□□□ -0.72
USF1-208ENST00000528768 HDHD2Q9H0R4 259 aa10.58□□□□□ -0.72
USF1-208ENST00000528768 TXNIPQ9H3M7 391 aa10.58□□□□□ -0.72
USF1-208ENST00000528768 WDR54Q9H977 334 aa10.58□□□□□ -0.72
USF1-208ENST00000528768 MOV10Q9HCE1 1003 aaKnown RBP10.58□□□□□ -0.72
USF1-208ENST00000528768 PAIP2BQ9ULR5 123 aaKnown RBP10.58□□□□□ -0.72
USF1-208ENST00000528768 RASD1Q9Y272 281 aa10.58□□□□□ -0.72
USF1-208ENST00000528768 SLC5A6Q9Y289 635 aa10.58□□□□□ -0.72
USF1-208ENST00000528768 SPENQ96T58 3664 aaKnown RBP10.57□□□□□ -0.72
USF1-208ENST00000528768 APCP25054 2843 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 CENPXA8MT69 81 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 K7EM74 188 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 TP53I11O14683 189 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 ZNF208O43345 1280 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 GMFGO60234 142 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 HLA-DQA2P01906 255 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 SPNP16150 400 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 AHCYP23526 432 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 MST1P26927 711 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 PITPNBP48739 271 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 DAP3P51398 398 aaKnown RBP10.57□□□□□ -0.72
USF1-208ENST00000528768 HCCSP53701 268 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 RASGEF1BQ0VAM2 473 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 ZP4Q12836 540 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 ALKBH1Q13686 389 aaKnown RBP10.57□□□□□ -0.72
USF1-208ENST00000528768 MESTQ5EB52 335 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 ZNF57Q68EA5 555 aaPredicted RBP10.57□□□□□ -0.72
USF1-208ENST00000528768 KCTD18Q6PI47 426 aaPredicted RBP10.57□□□□□ -0.72
USF1-208ENST00000528768 TMEM205Q6UW68 189 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 RPTNQ6XPR3 784 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 CDC20BQ86Y33 519 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 ADGRG3Q86Y34 549 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 UBQLNLQ8IYU4 475 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 GHDCQ8N2G8 530 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 SAMD12Q8N8I0 201 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 ZNF454Q8N9F8 522 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 IL17RDQ8NFM7 739 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 OR6N2Q8NGY6 317 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 OR5AK2Q8NH90 309 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 MFSD8Q8NHS3 518 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 ZNF671Q8TAW3 534 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 PRR7Q8TB68 274 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 C15orf40Q8WUR7 153 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 ZC3HAV1LQ96H79 300 aaKnown RBP10.57□□□□□ -0.72
USF1-208ENST00000528768 C5orf34Q96MH7 638 aa10.57□□□□□ -0.72
USF1-208ENST00000528768 FRMD6Q96NE9 622 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms