RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 DHRS1Q96LJ7 313 aa10.49□□□□□ -0.73
TRAPPC4-209ENST00000528230 NSMCE2Q96MF7 247 aa10.49□□□□□ -0.73
TRAPPC4-209ENST00000528230 RBP7Q96R05 134 aa10.49□□□□□ -0.73
TRAPPC4-209ENST00000528230 KCNK17Q96T54 332 aa10.49□□□□□ -0.73
TRAPPC4-209ENST00000528230 SMR3AQ99954 134 aa10.49□□□□□ -0.73
TRAPPC4-209ENST00000528230 RHNO1Q9BSD3 238 aa10.49□□□□□ -0.73
TRAPPC4-209ENST00000528230 PLK3Q9H4B4 646 aa10.49□□□□□ -0.73
TRAPPC4-209ENST00000528230 NOX3Q9HBY0 568 aa10.49□□□□□ -0.73
TRAPPC4-209ENST00000528230 ZNF346Q9UL40 294 aaKnown RBP10.49□□□□□ -0.73
TRAPPC4-209ENST00000528230 ZNF469Q96JG9 3925 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC4-209ENST00000528230 CHD3Q12873 2000 aaKnown RBP10.48□□□□□ -0.73
TRAPPC4-209ENST00000528230 TRAV27A0A087WT01 109 aa10.48□□□□□ -0.73
TRAPPC4-209ENST00000528230 B2RBV5 119 aa10.48□□□□□ -0.73
TRAPPC4-209ENST00000528230 SSX4O60224 188 aa10.48□□□□□ -0.73
TRAPPC4-209ENST00000528230 LY6G6DO95868 133 aa10.48□□□□□ -0.73
TRAPPC4-209ENST00000528230 F12P00748 615 aaPredicted RBP10.48□□□□□ -0.73
TRAPPC4-209ENST00000528230 PTHP01270 115 aa10.48□□□□□ -0.73
TRAPPC4-209ENST00000528230 SEMG1P04279 462 aa10.48□□□□□ -0.73
TRAPPC4-209ENST00000528230 NPR2P20594 1047 aa10.48□□□□□ -0.73
TRAPPC4-209ENST00000528230 THBS4P35443 961 aa10.48□□□□□ -0.73
TRAPPC4-209ENST00000528230 EFNA4P52798 201 aa10.48□□□□□ -0.73
TRAPPC4-209ENST00000528230 NUDT6P53370 316 aa10.48□□□□□ -0.73
TRAPPC4-209ENST00000528230 SNRPD2P62316 118 aaKnown RBP10.48□□□□□ -0.73
TRAPPC4-209ENST00000528230 MRPS34P82930 218 aaKnown RBP10.48□□□□□ -0.73
TRAPPC4-209ENST00000528230 MXRA7P84157 204 aa10.48□□□□□ -0.73
TRAPPC4-209ENST00000528230 VLDLRP98155 873 aa10.48□□□□□ -0.73
TRAPPC4-209ENST00000528230 DAG1Q14118 895 aa10.48□□□□□ -0.73
TRAPPC4-209ENST00000528230 TMEM53Q6P2H8 277 aa10.48□□□□□ -0.73
TRAPPC4-209ENST00000528230 PODNL1Q6PEZ8 512 aa10.48□□□□□ -0.73
TRAPPC4-209ENST00000528230 SLC25A47Q6Q0C1 308 aa10.48□□□□□ -0.73
TRAPPC4-209ENST00000528230 ARHGAP24Q8N264 748 aa10.48□□□□□ -0.73
TRAPPC4-209ENST00000528230 FAM86B1Q8N7N1 296 aa10.48□□□□□ -0.73
TRAPPC4-209ENST00000528230 CCDC197Q8NCU1 140 aa10.48□□□□□ -0.73
TRAPPC4-209ENST00000528230 OR10H5Q8NGA6 315 aa10.48□□□□□ -0.73
TRAPPC4-209ENST00000528230 OR4K5Q8NGD3 323 aa10.48□□□□□ -0.73
TRAPPC4-209ENST00000528230 FGFBP3Q8TAT2 258 aa10.48□□□□□ -0.73
TRAPPC4-209ENST00000528230 REG4Q9BYZ8 158 aa10.48□□□□□ -0.73
TRAPPC4-209ENST00000528230 NDEL1Q9GZM8 345 aa10.48□□□□□ -0.73
TRAPPC4-209ENST00000528230 SIAEQ9HAT2 523 aa10.48□□□□□ -0.73
TRAPPC4-209ENST00000528230 KRCC1Q9NPI7 259 aaPredicted RBP10.48□□□□□ -0.73
TRAPPC4-209ENST00000528230 FAM53CQ9NYF3 392 aa10.48□□□□□ -0.73
TRAPPC4-209ENST00000528230 CR1P17927 2039 aa10.48□□□□□ -0.73
TRAPPC4-209ENST00000528230 YLPM1P49750 1951 aaKnown RBP10.47□□□□□ -0.73
TRAPPC4-209ENST00000528230 hCG_2039718K7EN88 272 aa10.47□□□□□ -0.73
TRAPPC4-209ENST00000528230 CDC42EP2O14613 210 aa10.47□□□□□ -0.73
TRAPPC4-209ENST00000528230 SMAD7O15105 426 aaKnown RBP10.47□□□□□ -0.73
TRAPPC4-209ENST00000528230 ARPC2O15144 300 aa10.47□□□□□ -0.73
TRAPPC4-209ENST00000528230 AHCYL1O43865 530 aa10.47□□□□□ -0.73
TRAPPC4-209ENST00000528230 PTP4A3O75365 173 aa10.47□□□□□ -0.73
TRAPPC4-209ENST00000528230 CD14P08571 375 aa10.47□□□□□ -0.73
TRAPPC4-209ENST00000528230 CSF3P09919 207 aa10.47□□□□□ -0.73
TRAPPC4-209ENST00000528230 CALB2P22676 271 aa10.47□□□□□ -0.73
TRAPPC4-209ENST00000528230 MSX2P35548 267 aaPredicted RBP10.47□□□□□ -0.73
TRAPPC4-209ENST00000528230 GLRXP35754 106 aa10.47□□□□□ -0.73
TRAPPC4-209ENST00000528230 GPR4P46093 362 aa10.47□□□□□ -0.73
TRAPPC4-209ENST00000528230 OMPP47874 163 aa10.47□□□□□ -0.73
TRAPPC4-209ENST00000528230 EVX1P49640 407 aa10.47□□□□□ -0.73
TRAPPC4-209ENST00000528230 PPOXP50336 477 aa10.47□□□□□ -0.73
TRAPPC4-209ENST00000528230 MYBPC1Q00872 1141 aa10.47□□□□□ -0.73
TRAPPC4-209ENST00000528230 RAB39AQ14964 217 aa10.47□□□□□ -0.73
TRAPPC4-209ENST00000528230 VHLLQ6RSH7 139 aa10.47□□□□□ -0.73
TRAPPC4-209ENST00000528230 SLC16A14Q7RTX9 510 aa10.47□□□□□ -0.73
TRAPPC4-209ENST00000528230 ZNF584Q8IVC4 421 aa10.47□□□□□ -0.73
TRAPPC4-209ENST00000528230 ARIH2OSQ8N7S6 290 aa10.47□□□□□ -0.73
TRAPPC4-209ENST00000528230 OR13C2Q8NGS9 318 aa10.47□□□□□ -0.73
TRAPPC4-209ENST00000528230 ZNF519Q8TB69 540 aa10.47□□□□□ -0.73
TRAPPC4-209ENST00000528230 MCUR1Q96AQ8 359 aa10.47□□□□□ -0.73
TRAPPC4-209ENST00000528230 DOK1Q99704 481 aa10.47□□□□□ -0.73
TRAPPC4-209ENST00000528230 SH3GL3Q99963 347 aa10.47□□□□□ -0.73
TRAPPC4-209ENST00000528230 FUZQ9BT04 418 aa10.47□□□□□ -0.73
TRAPPC4-209ENST00000528230 KCNN2Q9H2S1 579 aa10.47□□□□□ -0.73
TRAPPC4-209ENST00000528230 C1orf198Q9H425 327 aa10.47□□□□□ -0.73
TRAPPC4-209ENST00000528230 RNF121Q9H920 327 aa10.47□□□□□ -0.73
TRAPPC4-209ENST00000528230 IL1RAPQ9NPH3 570 aa10.47□□□□□ -0.73
TRAPPC4-209ENST00000528230 CMAHPQ9Y471 501 aa10.47□□□□□ -0.73
TRAPPC4-209ENST00000528230 C2CD3Q4AC94 2353 aa10.46□□□□□ -0.73
TRAPPC4-209ENST00000528230 TMEM129A0AVI4 362 aa10.46□□□□□ -0.73
TRAPPC4-209ENST00000528230 SLC22A23A1A5C7 686 aa10.46□□□□□ -0.73
TRAPPC4-209ENST00000528230 SH3PXD2BA1X283 911 aa10.46□□□□□ -0.73
TRAPPC4-209ENST00000528230 RNF223E7ERA6 249 aa10.46□□□□□ -0.73
TRAPPC4-209ENST00000528230 NDUFB2O95178 105 aa10.46□□□□□ -0.73
TRAPPC4-209ENST00000528230 MMP7P09237 267 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC4-209ENST00000528230 PATE4P0C8F1 98 aa10.46□□□□□ -0.73
TRAPPC4-209ENST00000528230 RPL4P36578 427 aaKnown RBP10.46□□□□□ -0.73
TRAPPC4-209ENST00000528230 LIMS1P48059 325 aa10.46□□□□□ -0.73
TRAPPC4-209ENST00000528230 RPS23P62266 143 aaKnown RBP10.46□□□□□ -0.73
TRAPPC4-209ENST00000528230 GALK2Q01415 458 aa10.46□□□□□ -0.73
TRAPPC4-209ENST00000528230 PLP2Q04941 152 aa10.46□□□□□ -0.73
TRAPPC4-209ENST00000528230 CD47Q08722 323 aa10.46□□□□□ -0.73
TRAPPC4-209ENST00000528230 SNTB2Q13425 540 aaKnown RBP10.46□□□□□ -0.73
TRAPPC4-209ENST00000528230 TOP3AQ13472 1001 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC4-209ENST00000528230 MTX3Q5HYI7 312 aa10.46□□□□□ -0.73
TRAPPC4-209ENST00000528230 FGD3Q5JSP0 725 aa10.46□□□□□ -0.73
TRAPPC4-209ENST00000528230 FAM27BQ5VT28 67 aa10.46□□□□□ -0.73
TRAPPC4-209ENST00000528230 CLEC2AQ6UVW9 174 aa10.46□□□□□ -0.73
TRAPPC4-209ENST00000528230 FOXL2NBQ6ZUU3 175 aa10.46□□□□□ -0.73
TRAPPC4-209ENST00000528230 IGFN1Q86VF2 1251 aa10.46□□□□□ -0.73
TRAPPC4-209ENST00000528230 MEX3DQ86XN8 651 aaKnown RBP10.46□□□□□ -0.73
TRAPPC4-209ENST00000528230 OR1J2Q8NGS2 313 aa10.46□□□□□ -0.73
TRAPPC4-209ENST00000528230 POP5Q969H6 163 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms