RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 ACTR3BQ9P1U1 418 aa12.26□□□□□ -0.45
CAPN1-212ENST00000527887 STX18Q9P2W9 335 aaKnown RBP12.26□□□□□ -0.45
CAPN1-212ENST00000527887 KCNS2Q9ULS6 477 aa12.26□□□□□ -0.45
CAPN1-212ENST00000527887 CR1P17927 2039 aa12.25□□□□□ -0.45
CAPN1-212ENST00000527887 CHD3Q12873 2000 aaKnown RBP12.25□□□□□ -0.45
CAPN1-212ENST00000527887 DHHO43323 396 aa12.25□□□□□ -0.45
CAPN1-212ENST00000527887 SYNGR3O43761 229 aa12.25□□□□□ -0.45
CAPN1-212ENST00000527887 SERPINI2O75830 405 aa12.25□□□□□ -0.45
CAPN1-212ENST00000527887 SEC14L2O76054 403 aa12.25□□□□□ -0.45
CAPN1-212ENST00000527887 OR5F1O95221 314 aa12.25□□□□□ -0.45
CAPN1-212ENST00000527887 ATP6V1G2O95670 118 aa12.25□□□□□ -0.45
CAPN1-212ENST00000527887 PTHP01270 115 aa12.25□□□□□ -0.45
CAPN1-212ENST00000527887 IGHG1P01857 330 aa12.25□□□□□ -0.45
CAPN1-212ENST00000527887 MT-ND1P03886 318 aa12.25□□□□□ -0.45
CAPN1-212ENST00000527887 SERPINA5P05154 406 aa12.25□□□□□ -0.45
CAPN1-212ENST00000527887 UMPSP11172 480 aa12.25□□□□□ -0.45
CAPN1-212ENST00000527887 APEHP13798 732 aaKnown RBP12.25□□□□□ -0.45
CAPN1-212ENST00000527887 DAOP14920 347 aa12.25□□□□□ -0.45
CAPN1-212ENST00000527887 B4GALT1P15291 398 aa12.25□□□□□ -0.45
CAPN1-212ENST00000527887 IFNA8P32881 189 aa12.25□□□□□ -0.45
CAPN1-212ENST00000527887 PTDSS1P48651 473 aaKnown RBP12.25□□□□□ -0.45
CAPN1-212ENST00000527887 GALK2Q01415 458 aa12.25□□□□□ -0.45
CAPN1-212ENST00000527887 PIGFQ07326 219 aa12.25□□□□□ -0.45
CAPN1-212ENST00000527887 CARTPTQ16568 116 aa12.25□□□□□ -0.45
CAPN1-212ENST00000527887 KRT80Q6KB66 452 aa12.25□□□□□ -0.45
CAPN1-212ENST00000527887 ZFP1Q6P2D0 407 aa12.25□□□□□ -0.45
CAPN1-212ENST00000527887 NANOGNBQ7Z5D8 188 aa12.25□□□□□ -0.45
CAPN1-212ENST00000527887 SLC22A24Q8N4F4 322 aa12.25□□□□□ -0.45
CAPN1-212ENST00000527887 UBASH3BQ8TF42 649 aa12.25□□□□□ -0.45
CAPN1-212ENST00000527887 LIPHQ8WWY8 451 aa12.25□□□□□ -0.45
CAPN1-212ENST00000527887 HPS1Q92902 700 aa12.25□□□□□ -0.45
CAPN1-212ENST00000527887 DUS3LQ96G46 650 aaKnown RBP12.25□□□□□ -0.45
CAPN1-212ENST00000527887 PRSS27Q9BQR3 290 aa12.25□□□□□ -0.45
CAPN1-212ENST00000527887 TRIM15Q9C019 465 aa12.25□□□□□ -0.45
CAPN1-212ENST00000527887 ZNF224Q9NZL3 707 aa12.25□□□□□ -0.45
CAPN1-212ENST00000527887 SH3GLB1Q9Y371 365 aa12.25□□□□□ -0.45
CAPN1-212ENST00000527887 LOC100289279A0A1B0GTE1 492 aa12.24□□□□□ -0.45
CAPN1-212ENST00000527887 A0A1W2PRG6 482 aa12.24□□□□□ -0.45
CAPN1-212ENST00000527887 NPIPB13A6NJU9 1138 aa12.24□□□□□ -0.45
CAPN1-212ENST00000527887 AQP12BA6NM10 295 aa12.24□□□□□ -0.45
CAPN1-212ENST00000527887 NPIPB4C9JG80 1138 aa12.24□□□□□ -0.45
CAPN1-212ENST00000527887 TACSTD2P09758 323 aa12.24□□□□□ -0.45
CAPN1-212ENST00000527887 PGA4P0DJD7 388 aa12.24□□□□□ -0.45
CAPN1-212ENST00000527887 PGA3P0DJD8 388 aa12.24□□□□□ -0.45
CAPN1-212ENST00000527887 FUT1P19526 365 aa12.24□□□□□ -0.45
CAPN1-212ENST00000527887 GIPRP48546 466 aa12.24□□□□□ -0.45
CAPN1-212ENST00000527887 CRYBA2P53672 197 aa12.24□□□□□ -0.45
CAPN1-212ENST00000527887 TAS2R41P59536 307 aa12.24□□□□□ -0.45
CAPN1-212ENST00000527887 LIPEQ05469 1076 aa12.24□□□□□ -0.45
CAPN1-212ENST00000527887 FLOT2Q14254 428 aa12.24□□□□□ -0.45
CAPN1-212ENST00000527887 HIST3H3Q16695 136 aa12.24□□□□□ -0.45
CAPN1-212ENST00000527887 MTX3Q5HYI7 312 aa12.24□□□□□ -0.45
CAPN1-212ENST00000527887 RABL3Q5HYI8 236 aa12.24□□□□□ -0.45
CAPN1-212ENST00000527887 LRFN4Q6PJG9 635 aa12.24□□□□□ -0.45
CAPN1-212ENST00000527887 CARM1Q86X55 608 aa12.24□□□□□ -0.45
CAPN1-212ENST00000527887 SKA3Q8IX90 412 aa12.24□□□□□ -0.45
CAPN1-212ENST00000527887 AQP12AQ8IXF9 295 aa12.24□□□□□ -0.45
CAPN1-212ENST00000527887 LRRC17Q8N6Y2 441 aa12.24□□□□□ -0.45
CAPN1-212ENST00000527887 TMEM158Q8WZ71 300 aa12.24□□□□□ -0.45
CAPN1-212ENST00000527887 ZNF583Q96ND8 569 aa12.24□□□□□ -0.45
CAPN1-212ENST00000527887 BPESC1Q9GZL8 116 aa12.24□□□□□ -0.45
CAPN1-212ENST00000527887 RNPEPL1Q9HAU8 725 aa12.24□□□□□ -0.45
CAPN1-212ENST00000527887 MEPEQ9NQ76 525 aaPredicted RBP12.24□□□□□ -0.45
CAPN1-212ENST00000527887 TMEM38BQ9NVV0 291 aa12.24□□□□□ -0.45
CAPN1-212ENST00000527887 RIMS3Q9UJD0 308 aa12.24□□□□□ -0.45
CAPN1-212ENST00000527887 ARFGEF3Q5TH69 2177 aa12.23□□□□□ -0.45
CAPN1-212ENST00000527887 IGHV4-61A0A0C4DH41 118 aa12.23□□□□□ -0.45
CAPN1-212ENST00000527887 BLOC1S5-TXNDC5H3BN57 136 aa12.23□□□□□ -0.45
CAPN1-212ENST00000527887 M0R233 179 aa12.23□□□□□ -0.45
CAPN1-212ENST00000527887 KPNA4O00629 521 aaPredicted RBP12.23□□□□□ -0.45
CAPN1-212ENST00000527887 QDPRP09417 244 aa12.23□□□□□ -0.45
CAPN1-212ENST00000527887 TSPAN19P0C672 248 aa12.23□□□□□ -0.45
CAPN1-212ENST00000527887 NR2C1P13056 603 aa12.23□□□□□ -0.45
CAPN1-212ENST00000527887 HNF1AP20823 631 aa12.23□□□□□ -0.45
CAPN1-212ENST00000527887 GSK3BP49841 420 aa12.23□□□□□ -0.45
CAPN1-212ENST00000527887 DAP3P51398 398 aaKnown RBP12.23□□□□□ -0.45
CAPN1-212ENST00000527887 ZNF84P51523 738 aa12.23□□□□□ -0.45
CAPN1-212ENST00000527887 CHN2P52757 468 aa12.23□□□□□ -0.45
CAPN1-212ENST00000527887 SELENOVP59797 346 aa12.23□□□□□ -0.45
CAPN1-212ENST00000527887 SLC36A2Q495M3 483 aa12.23□□□□□ -0.45
CAPN1-212ENST00000527887 LCN8Q6JVE9 175 aa12.23□□□□□ -0.45
CAPN1-212ENST00000527887 TMEM53Q6P2H8 277 aa12.23□□□□□ -0.45
CAPN1-212ENST00000527887 TSPYL5Q86VY4 417 aaPredicted RBP12.23□□□□□ -0.45
CAPN1-212ENST00000527887 DHFR2Q86XF0 187 aa12.23□□□□□ -0.45
CAPN1-212ENST00000527887 WDFY1Q8IWB7 410 aa12.23□□□□□ -0.45
CAPN1-212ENST00000527887 OR1J2Q8NGS2 313 aa12.23□□□□□ -0.45
CAPN1-212ENST00000527887 TMEM239Q8WW34 195 aa12.23□□□□□ -0.45
CAPN1-212ENST00000527887 CCDC124Q96CT7 223 aaKnown RBP12.23□□□□□ -0.45
CAPN1-212ENST00000527887 MSI2Q96DH6 328 aaKnown RBP12.23□□□□□ -0.45
CAPN1-212ENST00000527887 SGTBQ96EQ0 304 aa12.23□□□□□ -0.45
CAPN1-212ENST00000527887 MS4A3Q96HJ5 214 aa12.23□□□□□ -0.45
CAPN1-212ENST00000527887 SEPHS2Q99611 448 aa12.23□□□□□ -0.45
CAPN1-212ENST00000527887 KCTD14Q9BQ13 255 aaPredicted RBP12.23□□□□□ -0.45
CAPN1-212ENST00000527887 MRPL13Q9BYD1 178 aaKnown RBP12.23□□□□□ -0.45
CAPN1-212ENST00000527887 GORASP2Q9H8Y8 452 aa12.23□□□□□ -0.45
CAPN1-212ENST00000527887 REV1Q9UBZ9 1251 aa12.23□□□□□ -0.45
CAPN1-212ENST00000527887 GPR160Q9UJ42 338 aa12.23□□□□□ -0.45
CAPN1-212ENST00000527887 MAGEL2Q9UJ55 1249 aa12.23□□□□□ -0.45
CAPN1-212ENST00000527887 ZNF346Q9UL40 294 aaKnown RBP12.23□□□□□ -0.45
CAPN1-212ENST00000527887 SNX13Q9Y5W8 968 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms