RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 ZNF556Q9HAH1 456 aa11.33□□□□□ -0.6
SMPD1-202ENST00000526280 SMURF2Q9HAU4 748 aa11.33□□□□□ -0.6
SMPD1-202ENST00000526280 REV1Q9UBZ9 1251 aa11.33□□□□□ -0.6
SMPD1-202ENST00000526280 POFUT2Q9Y2G5 429 aa11.33□□□□□ -0.6
SMPD1-202ENST00000526280 A0A096LPE4 126 aa11.32□□□□□ -0.6
SMPD1-202ENST00000526280 IGKV1D-43A0A0B4J1Z2 117 aa11.32□□□□□ -0.6
SMPD1-202ENST00000526280 A0A1W2PPZ6 126 aa11.32□□□□□ -0.6
SMPD1-202ENST00000526280 A0A1W2PR80 420 aa11.32□□□□□ -0.6
SMPD1-202ENST00000526280 SLC22A23A1A5C7 686 aa11.32□□□□□ -0.6
SMPD1-202ENST00000526280 PRSS37A4D1T9 235 aa11.32□□□□□ -0.6
SMPD1-202ENST00000526280 A6NHS1 94 aa11.32□□□□□ -0.6
SMPD1-202ENST00000526280 DEFB108AA8MXU0 73 aa11.32□□□□□ -0.6
SMPD1-202ENST00000526280 BHLHE40O14503 412 aa11.32□□□□□ -0.6
SMPD1-202ENST00000526280 SOCS2O14508 198 aa11.32□□□□□ -0.6
SMPD1-202ENST00000526280 SIAH2O43255 324 aa11.32□□□□□ -0.6
SMPD1-202ENST00000526280 CTAG2O75638 210 aa11.32□□□□□ -0.6
SMPD1-202ENST00000526280 GOSR1O95249 250 aa11.32□□□□□ -0.6
SMPD1-202ENST00000526280 IGFBP1P08833 259 aaPredicted RBP11.32□□□□□ -0.6
SMPD1-202ENST00000526280 TLE4Q04727 773 aa11.32□□□□□ -0.6
SMPD1-202ENST00000526280 CD47Q08722 323 aa11.32□□□□□ -0.6
SMPD1-202ENST00000526280 KRR1Q13601 381 aaKnown RBP11.32□□□□□ -0.6
SMPD1-202ENST00000526280 CLEC12AQ5QGZ9 265 aa11.32□□□□□ -0.6
SMPD1-202ENST00000526280 FAHD1Q6P587 224 aa11.32□□□□□ -0.6
SMPD1-202ENST00000526280 ADCK1Q86TW2 530 aa11.32□□□□□ -0.6
SMPD1-202ENST00000526280 ZDHHC13Q8IUH4 622 aa11.32□□□□□ -0.6
SMPD1-202ENST00000526280 SVOPLQ8N434 492 aa11.32□□□□□ -0.6
SMPD1-202ENST00000526280 ATG16L2Q8NAA4 619 aa11.32□□□□□ -0.6
SMPD1-202ENST00000526280 OR8D4Q8NGM9 314 aa11.32□□□□□ -0.6
SMPD1-202ENST00000526280 FOXB1Q99853 325 aa11.32□□□□□ -0.6
SMPD1-202ENST00000526280 SEMA6AQ9H2E6 1030 aa11.32□□□□□ -0.6
SMPD1-202ENST00000526280 OBP2BQ9NPH6 170 aa11.32□□□□□ -0.6
SMPD1-202ENST00000526280 AMDHD2Q9Y303 409 aa11.32□□□□□ -0.6
SMPD1-202ENST00000526280 CACNA1DQ01668 2161 aa11.32□□□□□ -0.6
SMPD1-202ENST00000526280 ARPC4-TTLL3A0A0A6YYG9 625 aa11.31□□□□□ -0.6
SMPD1-202ENST00000526280 H7C1C5 153 aa11.31□□□□□ -0.6
SMPD1-202ENST00000526280 SEC14L2O76054 403 aa11.31□□□□□ -0.6
SMPD1-202ENST00000526280 SOX14O95416 240 aa11.31□□□□□ -0.6
SMPD1-202ENST00000526280 SLC2A10O95528 541 aa11.31□□□□□ -0.6
SMPD1-202ENST00000526280 WNT11O96014 354 aa11.31□□□□□ -0.6
SMPD1-202ENST00000526280 HRGP04196 525 aa11.31□□□□□ -0.6
SMPD1-202ENST00000526280 HIST1H1CP16403 213 aaKnown RBP11.31□□□□□ -0.6
SMPD1-202ENST00000526280 ZNF23P17027 643 aa11.31□□□□□ -0.6
SMPD1-202ENST00000526280 NOS3P29474 1203 aa11.31□□□□□ -0.6
SMPD1-202ENST00000526280 HOXC12P31275 282 aa11.31□□□□□ -0.6
SMPD1-202ENST00000526280 CDKN2AP42771 156 aaKnown RBP11.31□□□□□ -0.6
SMPD1-202ENST00000526280 DAPP51397 102 aa11.31□□□□□ -0.6
SMPD1-202ENST00000526280 ZNF84P51523 738 aa11.31□□□□□ -0.6
SMPD1-202ENST00000526280 LCN6P62502 163 aa11.31□□□□□ -0.6
SMPD1-202ENST00000526280 FMODQ06828 376 aa11.31□□□□□ -0.6
SMPD1-202ENST00000526280 BEX5Q5H9J7 111 aa11.31□□□□□ -0.6
SMPD1-202ENST00000526280 ALKBH2Q6NS38 261 aa11.31□□□□□ -0.6
SMPD1-202ENST00000526280 TMEM154Q6P9G4 183 aa11.31□□□□□ -0.6
SMPD1-202ENST00000526280 KLHL24Q6TFL4 600 aa11.31□□□□□ -0.6
SMPD1-202ENST00000526280 ZNF813Q6ZN06 617 aa11.31□□□□□ -0.6
SMPD1-202ENST00000526280 PTCHD4Q6ZW05 846 aa11.31□□□□□ -0.6
SMPD1-202ENST00000526280 CCDC36Q8IYA8 594 aa11.31□□□□□ -0.6
SMPD1-202ENST00000526280 LNX2Q8N448 690 aa11.31□□□□□ -0.6
SMPD1-202ENST00000526280 TSSK6Q9BXA6 273 aa11.31□□□□□ -0.6
SMPD1-202ENST00000526280 VCXQ9H320 206 aa11.31□□□□□ -0.6
SMPD1-202ENST00000526280 NGBQ9NPG2 151 aa11.31□□□□□ -0.6
SMPD1-202ENST00000526280 RASSF1Q9NS23 344 aa11.31□□□□□ -0.6
SMPD1-202ENST00000526280 TBC1D23Q9NUY8 699 aa11.31□□□□□ -0.6
SMPD1-202ENST00000526280 TMEM38BQ9NVV0 291 aa11.31□□□□□ -0.6
SMPD1-202ENST00000526280 VSX1Q9NZR4 365 aaPredicted RBP11.31□□□□□ -0.6
SMPD1-202ENST00000526280 UGT2A1Q9Y4X1 527 aa11.31□□□□□ -0.6
SMPD1-202ENST00000526280 CADP27708 2225 aa11.3□□□□□ -0.6
SMPD1-202ENST00000526280 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.3□□□□□ -0.6
SMPD1-202ENST00000526280 H3BN98 237 aa11.3□□□□□ -0.6
SMPD1-202ENST00000526280 OSMP13725 252 aa11.3□□□□□ -0.6
SMPD1-202ENST00000526280 B4GALT1P15291 398 aa11.3□□□□□ -0.6
SMPD1-202ENST00000526280 PAX7P23759 505 aa11.3□□□□□ -0.6
SMPD1-202ENST00000526280 LOXP28300 417 aaPredicted RBP11.3□□□□□ -0.6
SMPD1-202ENST00000526280 HSPA13P48723 471 aa11.3□□□□□ -0.6
SMPD1-202ENST00000526280 UBE2NP61088 152 aaKnown RBP11.3□□□□□ -0.6
SMPD1-202ENST00000526280 MED21Q13503 144 aa11.3□□□□□ -0.6
SMPD1-202ENST00000526280 SLC36A3Q495N2 470 aa11.3□□□□□ -0.6
SMPD1-202ENST00000526280 NRN1LQ496H8 165 aa11.3□□□□□ -0.6
SMPD1-202ENST00000526280 ZNF362Q5T0B9 420 aaPredicted RBP11.3□□□□□ -0.6
SMPD1-202ENST00000526280 SLC35F1Q5T1Q4 408 aa11.3□□□□□ -0.6
SMPD1-202ENST00000526280 SLC22A24Q8N4F4 322 aa11.3□□□□□ -0.6
SMPD1-202ENST00000526280 OR2T33Q8NG76 320 aa11.3□□□□□ -0.6
SMPD1-202ENST00000526280 OR4Q3Q8NH05 313 aa11.3□□□□□ -0.6
SMPD1-202ENST00000526280 OR4K13Q8NH42 304 aa11.3□□□□□ -0.6
SMPD1-202ENST00000526280 NSMAFQ92636 917 aa11.3□□□□□ -0.6
SMPD1-202ENST00000526280 SNX18Q96RF0 628 aa11.3□□□□□ -0.6
SMPD1-202ENST00000526280 GABARAPL1Q9H0R8 117 aa11.3□□□□□ -0.6
SMPD1-202ENST00000526280 Q9H521 79 aa11.3□□□□□ -0.6
SMPD1-202ENST00000526280 NPAP1Q9NZP6 1156 aa11.3□□□□□ -0.6
SMPD1-202ENST00000526280 KIF17Q9P2E2 1029 aa11.3□□□□□ -0.6
SMPD1-202ENST00000526280 SCOCQ9UIL1 159 aa11.3□□□□□ -0.6
SMPD1-202ENST00000526280 OAZ3Q9UMX2 235 aa11.3□□□□□ -0.6
SMPD1-202ENST00000526280 BAIAP2Q9UQB8 552 aa11.3□□□□□ -0.6
SMPD1-202ENST00000526280 FBN2P35556 2912 aa11.3□□□□□ -0.6
SMPD1-202ENST00000526280 ZNF503-AS2A6NEH8 195 aa11.29□□□□□ -0.6
SMPD1-202ENST00000526280 DPRXA6NFQ7 191 aa11.29□□□□□ -0.6
SMPD1-202ENST00000526280 DENRO43583 198 aaKnown RBP11.29□□□□□ -0.6
SMPD1-202ENST00000526280 LYNP07948 512 aa11.29□□□□□ -0.6
SMPD1-202ENST00000526280 OR8G3PP0DMU2 310 aa11.29□□□□□ -0.6
SMPD1-202ENST00000526280 CTLA4P16410 223 aa11.29□□□□□ -0.6
SMPD1-202ENST00000526280 NPR2P20594 1047 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms