RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 FUT5Q11128 374 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 MFAP5Q13361 173 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 RNPS1Q15287 305 aaKnown RBP3.99□□□□□ -1.77
USP48-211ENST00000526044 ZNF141Q15928 474 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 NTRK2Q16620 822 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 ZSWIM7Q19AV6 140 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 KLHL26Q53HC5 615 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 CYBRD1Q53TN4 286 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 NHSL2Q5HYW2 709 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 SPINK14Q6IE38 97 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 SLC25A25Q6KCM7 469 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 SPSB3Q6PJ21 355 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 RTL4Q6ZR62 310 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 OLIG3Q7RTU3 272 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 NOXA1Q86UR1 476 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 C10orf67Q8IYJ2 551 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 EID3Q8N140 333 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 CYP4Z2PQ8N1L4 340 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 BEST3Q8N1M1 668 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 ZADH2Q8N4Q0 377 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 POMGNT2Q8NAT1 580 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 ZNF114Q8NC26 417 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 CATSPER1Q8NEC5 780 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 OR52E4Q8NGH9 312 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 DUSP19Q8WTR2 217 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 RASSF5Q8WWW0 418 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 TM9SF4Q92544 642 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 HGDQ93099 445 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 POP5Q969H6 163 aaKnown RBP3.99□□□□□ -1.77
USP48-211ENST00000526044 ASB9Q96DX5 294 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 SPACA9Q96E40 222 aaPredicted RBP3.99□□□□□ -1.77
USP48-211ENST00000526044 PYURFQ96I23 114 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 TPD52L3Q96J77 140 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 NSMCE2Q96MF7 247 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 CMTM3Q96MX0 182 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 WDFY2Q96P53 400 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 NR1H4Q96RI1 486 aaPredicted RBP3.99□□□□□ -1.77
USP48-211ENST00000526044 SECISBP2Q96T21 854 aaKnown RBP3.99□□□□□ -1.77
USP48-211ENST00000526044 NAA11Q9BSU3 229 aaPredicted RBP3.99□□□□□ -1.77
USP48-211ENST00000526044 C1QTNF4Q9BXJ3 329 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 PINK1Q9BXM7 581 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 UGT2B28Q9BY64 529 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 TBL1XR1Q9BZK7 514 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 TRIM15Q9C019 465 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 ZNF350Q9GZX5 532 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 SLC38A1Q9H2H9 487 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 ARMC7Q9H6L4 198 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 METTL7AQ9H8H3 244 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 CNIH4Q9P003 139 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 C6orf203Q9P0P8 240 aaPredicted RBP3.99□□□□□ -1.77
USP48-211ENST00000526044 SEC14L3Q9UDX4 400 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 SLC7A8Q9UHI5 535 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 A4GNTQ9UNA3 340 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 POMPQ9Y244 141 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 LSM4Q9Y4Z0 139 aaKnown RBP3.99□□□□□ -1.77
USP48-211ENST00000526044 DCHS1Q96JQ0 3298 aa3.99□□□□□ -1.77
USP48-211ENST00000526044 TNRC6AQ8NDV7 1962 aaKnown RBP3.98□□□□□ -1.77
USP48-211ENST00000526044 EXPH5Q8NEV8 1989 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 NINQ8N4C6 2090 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 A0A1W2PQD3 144 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 hDV102S1A0JD36 115 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 OR5H15A6NDH6 313 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 SERINC4A6NH21 518 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 ANKRD65E5RJM6 399 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 NPIPB9F8W1W9 429 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 KLRC4-KLRK1H3BQV0 150 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 ARPC2O15144 300 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 ZNF264O43296 627 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 FADS1O60427 444 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 TPST1O60507 370 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 OR2C1O95371 312 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 OXSR1O95747 527 aaPredicted RBP3.98□□□□□ -1.77
USP48-211ENST00000526044 ZNF682O95780 498 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 ANGPTL1O95841 491 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 LGI1O95970 557 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 PNPP00491 289 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 SERPINA1P01009 418 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 SP1P08047 785 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 UMPSP11172 480 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 CASP3P42574 277 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 CAMLGP49069 296 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 NPY4RP50391 375 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 LUMP51884 338 aaPredicted RBP3.98□□□□□ -1.77
USP48-211ENST00000526044 GAS1P54826 345 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 SNTA1Q13424 505 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 FLOT2Q14254 428 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 FGFBP1Q14512 234 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 SF3B4Q15427 424 aaKnown RBP eCLIP3.98□□□□□ -1.772e-6■■■■□ 23.6
USP48-211ENST00000526044 OR1C1Q15619 314 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 MAPK14Q16539 360 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 DUSP7Q16829 419 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 LRRC23Q53EV4 343 aaPredicted RBP3.98□□□□□ -1.77
USP48-211ENST00000526044 PDZK1Q5T2W1 519 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 C1orf146Q5VVC0 180 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 C19orf48Q6RUI8 117 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 IGFL2Q6UWQ7 119 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 IGFL3Q6UXB1 125 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 APOOLQ6UXV4 268 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 FRRS1Q6ZNA5 592 aa3.98□□□□□ -1.77
USP48-211ENST00000526044 EIF3MQ7L2H7 374 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms