RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 CCDC71Q8IV32 467 aaPredicted RBP2.91□□□□□ -1.94
CD44-217ENST00000525348 NUDCD3Q8IVD9 361 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 SLC34A3Q8N130 599 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 STK40Q8N2I9 435 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 KDM8Q8N371 416 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 CADM2Q8N3J6 435 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 COMMD1Q8N668 190 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 UXS1Q8NBZ7 420 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 OR4M2Q8NGB6 313 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 OR2D3Q8NGH3 330 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 OR4A15Q8NGL6 344 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 FLVCR1-AS1Q8TAF5 88 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 RNASE8Q8TDE3 154 aaKnown RBP2.91□□□□□ -1.94
CD44-217ENST00000525348 NEK7Q8TDX7 302 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 BCL2L2Q92843 193 aaPredicted RBP2.91□□□□□ -1.94
CD44-217ENST00000525348 DNASE1L2Q92874 299 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 ECHDC3Q96DC8 303 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 CMTM5Q96DZ9 223 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 TCEAL4Q96EI5 215 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 EEF2KMTQ96G04 330 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 PAGE5Q96GU1 130 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 RNF145Q96MT1 663 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 TEAD3Q99594 435 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 ZNF559Q9BR84 538 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 ATG101Q9BSB4 218 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 NAT9Q9BTE0 207 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 TPPP3Q9BW30 176 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 YTHDF1Q9BYJ9 559 aaKnown RBP2.91□□□□□ -1.94
CD44-217ENST00000525348 OR2AG1Q9H205 316 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 RGCCQ9H4X1 137 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 WDR55Q9H6Y2 383 aaPredicted RBP2.91□□□□□ -1.94
CD44-217ENST00000525348 VAT1LQ9HCJ6 419 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 ABCB8Q9NUT2 735 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 ACOXLQ9NUZ1 547 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 IMP3Q9NV31 184 aaKnown RBP2.91□□□□□ -1.94
CD44-217ENST00000525348 BABAM2Q9NXR7 383 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 B3GNT2Q9NY97 397 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 PLEK2Q9NYT0 353 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 AHSPQ9NZD4 102 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 CD274Q9NZQ7 290 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 VAPAQ9P0L0 249 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 SMPXQ9UHP9 88 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 RWDD2AQ9UIY3 292 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 CDH7Q9ULB5 785 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 GUCA1BQ9UMX6 200 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 SLC6A5Q9Y345 797 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 HYOU1Q9Y4L1 999 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 U3KQV3 271 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 PTPRUQ92729 1446 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 RIMS2Q9UQ26 1411 aa2.91□□□□□ -1.94
CD44-217ENST00000525348 COL22A1Q8NFW1 1626 aaPredicted RBP2.9□□□□□ -1.94
CD44-217ENST00000525348 A0A1W2PP64 1363 aa2.9□□□□□ -1.94
CD44-217ENST00000525348 ADGRB3O60242 1522 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 TDRD6O60522 2096 aaKnown RBP2.9□□□□□ -1.95
CD44-217ENST00000525348 A0A0A6YYH2 397 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 A0A1W2PPV4 95 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 HELTA6NFD8 242 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 FABP12A6NFH5 140 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 CCDC160A6NGH7 325 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 A6NJ64 397 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 H0YIG0 161 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 M0QYV0 167 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 DLEU1O43261 78 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 KDELR3O43731 214 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 HCN1O60741 890 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 TBX19O60806 448 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 HUS1O60921 280 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 EIF3GO75821 320 aaKnown RBP eCLIP2.9□□□□□ -1.95
CD44-217ENST00000525348 GLCEO94923 617 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 MT-ATP6P00846 226 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 RLN1P04808 185 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 S100A8P05109 93 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 HTR1AP08908 422 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 ABHD2P08910 425 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 MMP10P09238 476 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 SLC35E2BP0CK96 405 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 SLC35E2P0CK97 266 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 CALCBP10092 127 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 UROSP10746 265 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 IFI30P13284 250 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 ZNF250P15622 560 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 ZNF19P17023 458 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 UGT1A6P19224 532 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 CCNOP22674 350 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 ME2P23368 584 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 CALML3P27482 149 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 ID1P41134 155 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 NAMPTP43490 491 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 NPBWR1P48145 328 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 AKR1D1P51857 326 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 KPNA2P52292 529 aaKnown RBP2.9□□□□□ -1.95
CD44-217ENST00000525348 FGF8P55075 233 aaPredicted RBP2.9□□□□□ -1.95
CD44-217ENST00000525348 ATP5J2P56134 94 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 C21orf59P57076 290 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 OR2B6P58173 313 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 DAOAP59103 153 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 KRTAP10-8P60410 259 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 SNAP25P60880 206 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 ARF6P62330 175 aa2.9□□□□□ -1.95
CD44-217ENST00000525348 TNFRSF9Q07011 255 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms