RNA–Protein interactions for RNA: ENST00000524516.1

PUM1-213, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-213ENST00000524516 CDONQ4KMG0 1287 aa6.53□□□□□ -1.36
PUM1-213ENST00000524516 EXOSC6Q5RKV6 272 aaKnown RBP6.53□□□□□ -1.36
PUM1-213ENST00000524516 FAM201AQ5SY85 155 aa6.53□□□□□ -1.36
PUM1-213ENST00000524516 FAM71E1Q6IPT2 247 aa6.53□□□□□ -1.36
PUM1-213ENST00000524516 ANKRD26P1Q6NSI1 321 aa6.53□□□□□ -1.36
PUM1-213ENST00000524516 METTL2BQ6P1Q9 378 aaKnown RBP6.53□□□□□ -1.36
PUM1-213ENST00000524516 CRIP3Q6Q6R5 217 aa6.53□□□□□ -1.36
PUM1-213ENST00000524516 ETV3LQ6ZN32 361 aa6.53□□□□□ -1.36
PUM1-213ENST00000524516 ZNF627Q7L945 461 aa6.53□□□□□ -1.36
PUM1-213ENST00000524516 CENPVQ7Z7K6 275 aaPredicted RBP6.53□□□□□ -1.36
PUM1-213ENST00000524516 ZER1Q7Z7L7 766 aa6.53□□□□□ -1.36
PUM1-213ENST00000524516 SKA3Q8IX90 412 aa6.53□□□□□ -1.36
PUM1-213ENST00000524516 C1orf87Q8N0U7 546 aa6.53□□□□□ -1.36
PUM1-213ENST00000524516 TMEM123Q8N131 208 aa6.53□□□□□ -1.36
PUM1-213ENST00000524516 MIER2Q8N344 545 aa6.53□□□□□ -1.36
PUM1-213ENST00000524516 PNKDQ8N490 385 aa6.53□□□□□ -1.36
PUM1-213ENST00000524516 PTGR2Q8N8N7 351 aaPredicted RBP6.53□□□□□ -1.36
PUM1-213ENST00000524516 HIPK4Q8NE63 616 aa6.53□□□□□ -1.36
PUM1-213ENST00000524516 RORBQ92753 470 aa6.53□□□□□ -1.36
PUM1-213ENST00000524516 PHF21BQ96EK2 531 aa6.53□□□□□ -1.36
PUM1-213ENST00000524516 TM2D3Q9BRN9 247 aa6.53□□□□□ -1.36
PUM1-213ENST00000524516 PTDSS2Q9BVG9 487 aa6.53□□□□□ -1.36
PUM1-213ENST00000524516 CDCA4Q9BXL8 241 aa6.53□□□□□ -1.36
PUM1-213ENST00000524516 ACPTQ9BZG2 426 aa6.53□□□□□ -1.36
PUM1-213ENST00000524516 GCM1Q9NP62 436 aa6.53□□□□□ -1.36
PUM1-213ENST00000524516 PCTPQ9UKL6 214 aa6.53□□□□□ -1.36
PUM1-213ENST00000524516 KCNE3Q9Y6H6 103 aa6.53□□□□□ -1.36
PUM1-213ENST00000524516 MANBAO00462 879 aa6.52□□□□□ -1.37
PUM1-213ENST00000524516 AP3D1O14617 1153 aa6.52□□□□□ -1.37
PUM1-213ENST00000524516 OR10H3O60404 316 aa6.52□□□□□ -1.37
PUM1-213ENST00000524516 BCAS1O75363 584 aaPredicted RBP6.52□□□□□ -1.37
PUM1-213ENST00000524516 FGGP02679 453 aa6.52□□□□□ -1.37
PUM1-213ENST00000524516 KRT16P08779 473 aa6.52□□□□□ -1.37
PUM1-213ENST00000524516 PAICSP22234 425 aaKnown RBP6.52□□□□□ -1.37
PUM1-213ENST00000524516 PGM1P36871 562 aa6.52□□□□□ -1.37
PUM1-213ENST00000524516 THBS3P49746 956 aa6.52□□□□□ -1.37
PUM1-213ENST00000524516 GP2P55259 537 aaKnown RBP6.52□□□□□ -1.37
PUM1-213ENST00000524516 TP53BP2Q13625 1128 aa6.52□□□□□ -1.37
PUM1-213ENST00000524516 ZNF141Q15928 474 aa6.52□□□□□ -1.37
PUM1-213ENST00000524516 SMU1Q2TAY7 513 aa6.52□□□□□ -1.37
PUM1-213ENST00000524516 XKR7Q5GH72 579 aa6.52□□□□□ -1.37
PUM1-213ENST00000524516 SPDYAQ5MJ70 313 aa6.52□□□□□ -1.37
PUM1-213ENST00000524516 C9orf66Q5T8R8 295 aa6.52□□□□□ -1.37
PUM1-213ENST00000524516 METAP1DQ6UB28 335 aaPredicted RBP6.52□□□□□ -1.37
PUM1-213ENST00000524516 CMC1Q7Z7K0 106 aa6.52□□□□□ -1.37
PUM1-213ENST00000524516 CMTM4Q8IZR5 234 aa6.52□□□□□ -1.37
PUM1-213ENST00000524516 FAM71CQ8NEG0 241 aa6.52□□□□□ -1.37
PUM1-213ENST00000524516 OR6N1Q8NGY5 312 aa6.52□□□□□ -1.37
PUM1-213ENST00000524516 RHEBL1Q8TAI7 183 aa6.52□□□□□ -1.37
PUM1-213ENST00000524516 ABHD4Q8TB40 342 aa6.52□□□□□ -1.37
PUM1-213ENST00000524516 FAM120BQ96EK7 910 aaKnown RBP6.52□□□□□ -1.37
PUM1-213ENST00000524516 GPR22Q99680 433 aa6.52□□□□□ -1.37
PUM1-213ENST00000524516 LMBRD1Q9NUN5 540 aa6.52□□□□□ -1.37
PUM1-213ENST00000524516 MRPL15Q9P015 296 aaKnown RBP6.52□□□□□ -1.37
PUM1-213ENST00000524516 KCNE5Q9UJ90 142 aa6.52□□□□□ -1.37
PUM1-213ENST00000524516 MKLN1Q9UL63 735 aa6.52□□□□□ -1.37
PUM1-213ENST00000524516 KPTNQ9Y664 436 aa6.52□□□□□ -1.37
PUM1-213ENST00000524516 NUP214P35658 2090 aaPredicted RBP6.51□□□□□ -1.37
PUM1-213ENST00000524516 PRR23D1E9PI22 279 aaPredicted RBP6.51□□□□□ -1.37
PUM1-213ENST00000524516 PPP6CO00743 305 aa6.51□□□□□ -1.37
PUM1-213ENST00000524516 LDLRAD4O15165 306 aa6.51□□□□□ -1.37
PUM1-213ENST00000524516 DEDDO75618 318 aa6.51□□□□□ -1.37
PUM1-213ENST00000524516 UGT2B17O75795 530 aa6.51□□□□□ -1.37
PUM1-213ENST00000524516 OR4F21O95013 312 aa6.51□□□□□ -1.37
PUM1-213ENST00000524516 FARS2O95363 451 aaKnown RBP6.51□□□□□ -1.37
PUM1-213ENST00000524516 PRR23D2P0DMB1 279 aaPredicted RBP6.51□□□□□ -1.37
PUM1-213ENST00000524516 PNMTP11086 282 aa6.51□□□□□ -1.37
PUM1-213ENST00000524516 IRF2P14316 349 aa6.51□□□□□ -1.37
PUM1-213ENST00000524516 UQCRBP14927 111 aa6.51□□□□□ -1.37
PUM1-213ENST00000524516 EFNA1P20827 205 aaPredicted RBP6.51□□□□□ -1.37
PUM1-213ENST00000524516 HMOX2P30519 316 aa6.51□□□□□ -1.37
PUM1-213ENST00000524516 HTR5AP47898 357 aa6.51□□□□□ -1.37
PUM1-213ENST00000524516 RGS6P49758 472 aa6.51□□□□□ -1.37
PUM1-213ENST00000524516 PPP1CBP62140 327 aa6.51□□□□□ -1.37
PUM1-213ENST00000524516 HSF2Q03933 536 aa6.51□□□□□ -1.37
PUM1-213ENST00000524516 BNIP2Q12982 314 aa6.51□□□□□ -1.37
PUM1-213ENST00000524516 RBMY1FQ15415 496 aaKnown RBP6.51□□□□□ -1.37
PUM1-213ENST00000524516 CNN3Q15417 329 aaKnown RBP6.51□□□□□ -1.37
PUM1-213ENST00000524516 FAM83EQ2M2I3 478 aa6.51□□□□□ -1.37
PUM1-213ENST00000524516 SLC36A2Q495M3 483 aa6.51□□□□□ -1.37
PUM1-213ENST00000524516 RPS27LQ71UM5 84 aaKnown RBP6.51□□□□□ -1.37
PUM1-213ENST00000524516 BTN2A1Q7KYR7 527 aa6.51□□□□□ -1.37
PUM1-213ENST00000524516 IGFN1Q86VF2 1251 aa6.51□□□□□ -1.37
PUM1-213ENST00000524516 ANKMY2Q8IV38 441 aa6.51□□□□□ -1.37
PUM1-213ENST00000524516 C20orf196Q8IYI0 205 aa6.51□□□□□ -1.37
PUM1-213ENST00000524516 PDIK1LQ8N165 341 aa6.51□□□□□ -1.37
PUM1-213ENST00000524516 SLC22A24Q8N4F4 322 aa6.51□□□□□ -1.37
PUM1-213ENST00000524516 RBM15BQ8NDT2 890 aaKnown RBP6.51□□□□□ -1.37
PUM1-213ENST00000524516 C19orf18Q8NEA5 215 aa6.51□□□□□ -1.37
PUM1-213ENST00000524516 PNPT1Q8TCS8 783 aaKnown RBP6.51□□□□□ -1.37
PUM1-213ENST00000524516 SLC25A36Q96CQ1 311 aa6.51□□□□□ -1.37
PUM1-213ENST00000524516 TUBGCP3Q96CW5 907 aa6.51□□□□□ -1.37
PUM1-213ENST00000524516 ITCHQ96J02 903 aa6.51□□□□□ -1.37
PUM1-213ENST00000524516 OXGR1Q96P68 337 aa6.51□□□□□ -1.37
PUM1-213ENST00000524516 SDF2Q99470 211 aa6.51□□□□□ -1.37
PUM1-213ENST00000524516 SH3GL3Q99963 347 aa6.51□□□□□ -1.37
PUM1-213ENST00000524516 MECRQ9BV79 373 aa6.51□□□□□ -1.37
PUM1-213ENST00000524516 EMC6Q9BV81 110 aa6.51□□□□□ -1.37
PUM1-213ENST00000524516 CTSZQ9UBR2 303 aa6.51□□□□□ -1.37
PUM1-213ENST00000524516 POLR3HQ9Y535 204 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms