RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 FOXN4Q96NZ1 517 aa13.99□□□□□ -0.17
CLN8-206ENST00000523237 KCTD14Q9BQ13 255 aaPredicted RBP13.99□□□□□ -0.17
CLN8-206ENST00000523237 MRPL37Q9BZE1 423 aaKnown RBP13.99□□□□□ -0.17
CLN8-206ENST00000523237 TXNIPQ9H3M7 391 aa13.99□□□□□ -0.17
CLN8-206ENST00000523237 C1orf198Q9H425 327 aa13.99□□□□□ -0.17
CLN8-206ENST00000523237 SMURF2Q9HAU4 748 aa13.99□□□□□ -0.17
CLN8-206ENST00000523237 ADAM21Q9UKJ8 722 aa13.99□□□□□ -0.17
CLN8-206ENST00000523237 JMJD1CQ15652 2540 aa13.99□□□□□ -0.17
CLN8-206ENST00000523237 SLC22A23A1A5C7 686 aa13.98□□□□□ -0.17
CLN8-206ENST00000523237 GMNCA6NCL1 334 aa13.98□□□□□ -0.17
CLN8-206ENST00000523237 KIAA1324LA8MWY0 1029 aaPredicted RBP13.98□□□□□ -0.17
CLN8-206ENST00000523237 J3KTA2 159 aa13.98□□□□□ -0.17
CLN8-206ENST00000523237 SYNGR3O43761 229 aa13.98□□□□□ -0.17
CLN8-206ENST00000523237 PTHP01270 115 aa13.98□□□□□ -0.17
CLN8-206ENST00000523237 ADRA2AP08913 450 aa13.98□□□□□ -0.17
CLN8-206ENST00000523237 IGHV4-31P0DP07 118 aa13.98□□□□□ -0.17
CLN8-206ENST00000523237 DAOP14920 347 aa13.98□□□□□ -0.17
CLN8-206ENST00000523237 SEC24CP53992 1094 aa13.98□□□□□ -0.17
CLN8-206ENST00000523237 PLP2Q04941 152 aa13.98□□□□□ -0.17
CLN8-206ENST00000523237 CD47Q08722 323 aa13.98□□□□□ -0.17
CLN8-206ENST00000523237 C10orf128Q5T292 105 aa13.98□□□□□ -0.17
CLN8-206ENST00000523237 CYB5R2Q6BCY4 276 aa13.98□□□□□ -0.17
CLN8-206ENST00000523237 HIPK1Q86Z02 1210 aa13.98□□□□□ -0.17
CLN8-206ENST00000523237 NRMQ8IXM6 262 aa13.98□□□□□ -0.17
CLN8-206ENST00000523237 RNF113BQ8IZP6 322 aaKnown RBP13.98□□□□□ -0.17
CLN8-206ENST00000523237 ZCCHC24Q8N2G6 241 aaKnown RBP13.98□□□□□ -0.17
CLN8-206ENST00000523237 SLC30A7Q8NEW0 376 aa13.98□□□□□ -0.17
CLN8-206ENST00000523237 FAM162AQ96A26 154 aa13.98□□□□□ -0.17
CLN8-206ENST00000523237 FAM107BQ9H098 131 aa13.98□□□□□ -0.17
CLN8-206ENST00000523237 NSRP1Q9H0G5 558 aaKnown RBP13.98□□□□□ -0.17
CLN8-206ENST00000523237 MYLK2Q9H1R3 596 aa13.98□□□□□ -0.17
CLN8-206ENST00000523237 KCNN2Q9H2S1 579 aa13.98□□□□□ -0.17
CLN8-206ENST00000523237 MAN2C1Q9NTJ4 1040 aa13.98□□□□□ -0.17
CLN8-206ENST00000523237 ABCD2Q9UBJ2 740 aa13.98□□□□□ -0.17
CLN8-206ENST00000523237 IQCMA0A1B0GVH7 501 aa13.97□□□□□ -0.17
CLN8-206ENST00000523237 M0R233 179 aa13.97□□□□□ -0.17
CLN8-206ENST00000523237 FFAR1O14842 300 aa13.97□□□□□ -0.17
CLN8-206ENST00000523237 SLC2A10O95528 541 aa13.97□□□□□ -0.17
CLN8-206ENST00000523237 MAKP20794 623 aa13.97□□□□□ -0.17
CLN8-206ENST00000523237 FUT4P22083 530 aa13.97□□□□□ -0.17
CLN8-206ENST00000523237 PRDX6P30041 224 aa13.97□□□□□ -0.17
CLN8-206ENST00000523237 GZMKP49863 264 aa13.97□□□□□ -0.17
CLN8-206ENST00000523237 PSME3P61289 254 aa13.97□□□□□ -0.17
CLN8-206ENST00000523237 RPL27P61353 136 aaKnown RBP13.97□□□□□ -0.17
CLN8-206ENST00000523237 MRPS34P82930 218 aaKnown RBP13.97□□□□□ -0.17
CLN8-206ENST00000523237 PRKCDQ05655 676 aa13.97□□□□□ -0.17
CLN8-206ENST00000523237 TOP3AQ13472 1001 aaPredicted RBP13.97□□□□□ -0.17
CLN8-206ENST00000523237 MSMPQ1L6U9 139 aa13.97□□□□□ -0.17
CLN8-206ENST00000523237 ANKDD1AQ495B1 522 aa13.97□□□□□ -0.17
CLN8-206ENST00000523237 IQCCQ4KMZ1 466 aa13.97□□□□□ -0.17
CLN8-206ENST00000523237 FAM205BPQ63HN1 556 aa13.97□□□□□ -0.17
CLN8-206ENST00000523237 ZNF730Q6ZMV8 503 aa13.97□□□□□ -0.17
CLN8-206ENST00000523237 OAFQ86UD1 273 aa13.97□□□□□ -0.17
CLN8-206ENST00000523237 CYP4Z1Q86W10 505 aa13.97□□□□□ -0.17
CLN8-206ENST00000523237 LRRC18Q8N456 261 aa13.97□□□□□ -0.17
CLN8-206ENST00000523237 RBM15BQ8NDT2 890 aaKnown RBP13.97□□□□□ -0.17
CLN8-206ENST00000523237 OR1J2Q8NGS2 313 aa13.97□□□□□ -0.17
CLN8-206ENST00000523237 OR51A7Q8NH64 312 aa13.97□□□□□ -0.17
CLN8-206ENST00000523237 FNDC8Q8TC99 324 aa13.97□□□□□ -0.17
CLN8-206ENST00000523237 ACOT11Q8WXI4 607 aaPredicted RBP13.97□□□□□ -0.17
CLN8-206ENST00000523237 HDAC2Q92769 488 aaKnown RBP13.97□□□□□ -0.17
CLN8-206ENST00000523237 SYT3Q9BQG1 590 aa13.97□□□□□ -0.17
CLN8-206ENST00000523237 BPESC1Q9GZL8 116 aa13.97□□□□□ -0.17
CLN8-206ENST00000523237 LRMDAQ9H2I8 198 aa13.97□□□□□ -0.17
CLN8-206ENST00000523237 MS4A5Q9H3V2 200 aa13.97□□□□□ -0.17
CLN8-206ENST00000523237 SIAEQ9HAT2 523 aa13.97□□□□□ -0.17
CLN8-206ENST00000523237 CDH20Q9HBT6 801 aa13.97□□□□□ -0.17
CLN8-206ENST00000523237 REV1Q9UBZ9 1251 aa13.97□□□□□ -0.17
CLN8-206ENST00000523237 RPS6KA6Q9UK32 745 aa13.97□□□□□ -0.17
CLN8-206ENST00000523237 A0A087WUU8 490 aa13.96□□□□□ -0.17
CLN8-206ENST00000523237 EFCAB9A8MZ26 197 aa13.96□□□□□ -0.17
CLN8-206ENST00000523237 STAMBPO95630 424 aa13.96□□□□□ -0.17
CLN8-206ENST00000523237 IGHMP01871 453 aa13.96□□□□□ -0.17
CLN8-206ENST00000523237 IGFBP1P08833 259 aaPredicted RBP13.96□□□□□ -0.17
CLN8-206ENST00000523237 APEHP13798 732 aaKnown RBP13.96□□□□□ -0.17
CLN8-206ENST00000523237 NCK1P16333 377 aa13.96□□□□□ -0.17
CLN8-206ENST00000523237 GIFP27352 417 aa13.96□□□□□ -0.17
CLN8-206ENST00000523237 SLC9A3P48764 834 aa13.96□□□□□ -0.17
CLN8-206ENST00000523237 CTXN1P60606 82 aa13.96□□□□□ -0.17
CLN8-206ENST00000523237 FMODQ06828 376 aa13.96□□□□□ -0.17
CLN8-206ENST00000523237 TBC1D28Q2M2D7 210 aa13.96□□□□□ -0.17
CLN8-206ENST00000523237 CHRFAM7AQ494W8 412 aa13.96□□□□□ -0.17
CLN8-206ENST00000523237 RRM2BQ7LG56 351 aa13.96□□□□□ -0.17
CLN8-206ENST00000523237 CPLX4Q7Z7G2 160 aa13.96□□□□□ -0.17
CLN8-206ENST00000523237 ZNF786Q8N393 782 aa13.96□□□□□ -0.17
CLN8-206ENST00000523237 UBASH3BQ8TF42 649 aa13.96□□□□□ -0.17
CLN8-206ENST00000523237 NMD3Q96D46 503 aaKnown RBP13.96□□□□□ -0.17
CLN8-206ENST00000523237 RBP7Q96R05 134 aa13.96□□□□□ -0.17
CLN8-206ENST00000523237 KCNK17Q96T54 332 aa13.96□□□□□ -0.17
CLN8-206ENST00000523237 ALG12Q9BV10 488 aa13.96□□□□□ -0.17
CLN8-206ENST00000523237 TPK1Q9H3S4 243 aa13.96□□□□□ -0.17
CLN8-206ENST00000523237 ANKRD19PQ9H560 264 aa13.96□□□□□ -0.17
CLN8-206ENST00000523237 CCNB1IP1Q9NPC3 277 aa13.96□□□□□ -0.17
CLN8-206ENST00000523237 SPAG4Q9NPE6 437 aa13.96□□□□□ -0.17
CLN8-206ENST00000523237 TMEM160Q9NX00 188 aa13.96□□□□□ -0.17
CLN8-206ENST00000523237 DUSP13Q9UII6 198 aa13.96□□□□□ -0.17
CLN8-206ENST00000523237 ZNF346Q9UL40 294 aaKnown RBP13.96□□□□□ -0.17
CLN8-206ENST00000523237 TRAV27A0A087WT01 109 aa13.95□□□□□ -0.18
CLN8-206ENST00000523237 IGHV4-61A0A0C4DH41 118 aa13.95□□□□□ -0.18
CLN8-206ENST00000523237 A6NIZ1 184 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms