RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 BARX1Q9HBU1 254 aaPredicted RBP8.23□□□□□ -1.09
CLK4-209ENST00000521621 CBLN4Q9NTU7 201 aa8.23□□□□□ -1.09
CLK4-209ENST00000521621 GRHPRQ9UBQ7 328 aa8.23□□□□□ -1.09
CLK4-209ENST00000521621 KCNG2Q9UJ96 466 aa8.23□□□□□ -1.09
CLK4-209ENST00000521621 TEX13CA0A0J9YWL9 993 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 PRSS37A4D1T9 235 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 J3QW42 95 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 ABCD4O14678 606 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 SERPINA5P05154 406 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 APOBEC3AP31941 199 aaPredicted RBP8.22□□□□□ -1.09
CLK4-209ENST00000521621 ACVR1BP36896 505 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 GPR4P46093 362 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 CDH11P55287 796 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 PCBD1P61457 104 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 RUNX1T1Q06455 604 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 SWI5Q1ZZU3 235 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 DNM1P46Q6ZS02 220 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 ZBTB46Q86UZ6 589 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 OR52N5Q8NH56 324 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 UTP4Q969X6 686 aaKnown RBP8.22□□□□□ -1.09
CLK4-209ENST00000521621 DDOQ99489 341 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 CCL19Q99731 98 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 RACGAP1Q9H0H5 632 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 DNAJB9Q9UBS3 223 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 SLC7A8Q9UHI5 535 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 MSX2P35548 267 aaPredicted RBP8.22□□□□□ -1.09
CLK4-209ENST00000521621 ZNF83P51522 516 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 HIST1H3AP68431 136 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 KEAP1Q14145 624 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 FLOT2Q14254 428 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 MELKQ14680 651 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 PGGHGQ32M88 737 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 MESTQ5EB52 335 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 HIST2H3PS2Q5TEC6 136 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 DNM1P34Q6PK57 102 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 CYP2R1Q6VVX0 501 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 HIST2H3AQ71DI3 136 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 YTHDF3Q7Z739 585 aaKnown RBP8.22□□□□□ -1.09
CLK4-209ENST00000521621 KRTAP1-3Q8IUG1 177 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 SKA3Q8IX90 412 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 KBTBD8Q8NFY9 601 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 SMAP2Q8WU79 429 aaPredicted RBP8.22□□□□□ -1.09
CLK4-209ENST00000521621 ZNF570Q96NI8 536 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 GPA33Q99795 319 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 CHID1Q9BWS9 393 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 TRAV27A0A087WT01 109 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 E7EQL1 145 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 M0R1B8 84 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 SMPD2O60906 423 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 PLAUP00749 431 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 CRYAAP02489 173 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 CECR9P0C854 216 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 CRABP1P29762 137 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 TTKP33981 857 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 MDP1Q86V88 176 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 C10orf67Q8IYJ2 551 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 OR51A7Q8NH64 312 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 TMEM171Q8WVE6 324 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 OR52D1Q9H346 318 aa8.22□□□□□ -1.09
CLK4-209ENST00000521621 CISD1Q9NZ45 108 aaKnown RBP8.22□□□□□ -1.09
CLK4-209ENST00000521621 FREM1Q5H8C1 2179 aa8.21□□□□□ -1.09
CLK4-209ENST00000521621 IGHV2OR16-5A0A0B4J2B6 119 aa8.21□□□□□ -1.1
CLK4-209ENST00000521621 VSTM5A8MXK1 200 aa8.21□□□□□ -1.1
CLK4-209ENST00000521621 BHLHE40O14503 412 aa8.21□□□□□ -1.1
CLK4-209ENST00000521621 ARHGEF9O43307 516 aa8.21□□□□□ -1.1
CLK4-209ENST00000521621 OR10H3O60404 316 aa8.21□□□□□ -1.1
CLK4-209ENST00000521621 FCGR1AP12314 374 aa8.21□□□□□ -1.1
CLK4-209ENST00000521621 PPOXP50336 477 aa8.21□□□□□ -1.1
CLK4-209ENST00000521621 RPS23P62266 143 aaKnown RBP8.21□□□□□ -1.1
CLK4-209ENST00000521621 KRR1Q13601 381 aaKnown RBP8.21□□□□□ -1.1
CLK4-209ENST00000521621 CARD17Q5XLA6 110 aa8.21□□□□□ -1.1
CLK4-209ENST00000521621 TGIF2LYQ8IUE0 185 aa8.21□□□□□ -1.1
CLK4-209ENST00000521621 LNX2Q8N448 690 aa8.21□□□□□ -1.1
CLK4-209ENST00000521621 FANK1Q8TC84 345 aa8.21□□□□□ -1.1
CLK4-209ENST00000521621 CLPTM1LQ96KA5 538 aa8.21□□□□□ -1.1
CLK4-209ENST00000521621 DCLRE1CQ96SD1 692 aaKnown RBP8.21□□□□□ -1.1
CLK4-209ENST00000521621 GABARAPL1Q9H0R8 117 aa8.21□□□□□ -1.1
CLK4-209ENST00000521621 KCNN2Q9H2S1 579 aa8.21□□□□□ -1.1
CLK4-209ENST00000521621 UBTD1Q9HAC8 227 aa8.21□□□□□ -1.1
CLK4-209ENST00000521621 MYOZ1Q9NP98 299 aaPredicted RBP8.21□□□□□ -1.1
CLK4-209ENST00000521621 KLHL21Q9UJP4 597 aa8.21□□□□□ -1.1
CLK4-209ENST00000521621 SPEF1Q9Y4P9 236 aa8.21□□□□□ -1.1
CLK4-209ENST00000521621 ZNF503-AS2A6NEH8 195 aa8.21□□□□□ -1.1
CLK4-209ENST00000521621 B9A039 149 aa8.21□□□□□ -1.1
CLK4-209ENST00000521621 XKRYO14609 159 aa8.21□□□□□ -1.1
CLK4-209ENST00000521621 FKBP6O75344 327 aa8.21□□□□□ -1.1
CLK4-209ENST00000521621 KHDRBS3O75525 346 aaKnown RBP8.21□□□□□ -1.1
CLK4-209ENST00000521621 RAB36O95755 333 aa8.21□□□□□ -1.1
CLK4-209ENST00000521621 CD8AP01732 235 aa8.21□□□□□ -1.1
CLK4-209ENST00000521621 TP53P04637 393 aaPredicted RBP8.21□□□□□ -1.1
CLK4-209ENST00000521621 MSR1P21757 451 aa8.21□□□□□ -1.1
CLK4-209ENST00000521621 NR4A1P22736 598 aa8.21□□□□□ -1.1
CLK4-209ENST00000521621 PTH2RP49190 550 aa8.21□□□□□ -1.1
CLK4-209ENST00000521621 DSCR9P59020 149 aa8.21□□□□□ -1.1
CLK4-209ENST00000521621 SHQ1Q6PI26 577 aaKnown RBP8.21□□□□□ -1.1
CLK4-209ENST00000521621 THSD4Q6ZMP0 1018 aa8.21□□□□□ -1.1
CLK4-209ENST00000521621 CANT1Q8WVQ1 401 aa8.21□□□□□ -1.1
CLK4-209ENST00000521621 SLCO4A1Q96BD0 722 aa8.21□□□□□ -1.1
CLK4-209ENST00000521621 TMUB1Q9BVT8 246 aa8.21□□□□□ -1.1
CLK4-209ENST00000521621 LIME1Q9H400 295 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms