RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 RPUSD1Q9UJJ7 312 aaKnown RBP3.19□□□□□ -1.9
VPS13B-208ENST00000521037 ZNF490Q9ULM2 529 aaPredicted RBP3.19□□□□□ -1.9
VPS13B-208ENST00000521037 BZW2Q9Y6E2 419 aaKnown RBP3.19□□□□□ -1.9
VPS13B-208ENST00000521037 LRP1BQ9NZR2 4599 aa3.19□□□□□ -1.9
VPS13B-208ENST00000521037 ARHGAP32A7KAX9 2087 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 A0A1B0GUS0 222 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 C2orf92A0A1B0GVN3 265 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 VGLL3A8MV65 326 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 H0YHG0 523 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 J3QLI3 93 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 TP53I11O14683 189 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 TO15178 435 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 ERI3O43414 337 aaKnown RBP3.18□□□□□ -1.9
VPS13B-208ENST00000521037 CXCL13O43927 109 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 FADS1O60427 444 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 FCGR3BO75015 233 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 NME6O75414 186 aaPredicted RBP3.18□□□□□ -1.9
VPS13B-208ENST00000521037 FAM107AO95990 144 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 CATP04040 527 aaKnown RBP3.18□□□□□ -1.9
VPS13B-208ENST00000521037 MPC1LP0DKB6 136 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 SPP1P10451 314 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 ATP5A1P25705 553 aaKnown RBP3.18□□□□□ -1.9
VPS13B-208ENST00000521037 RPL22P35268 128 aaKnown RBP3.18□□□□□ -1.9
VPS13B-208ENST00000521037 OR3A2P47893 321 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 MNAT1P51948 309 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 PGGT1BP53609 377 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 SNRPEP62304 92 aaKnown RBP3.18□□□□□ -1.9
VPS13B-208ENST00000521037 CSNK2A1P68400 391 aaPredicted RBP3.18□□□□□ -1.9
VPS13B-208ENST00000521037 RGS1Q08116 209 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 BAMBIQ13145 260 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 SLAMF1Q13291 335 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 TMED2Q15363 201 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 GABRA6Q16445 453 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 NNATQ16517 81 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 CARTPTQ16568 116 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 DECR1Q16698 335 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 HADHQ16836 314 aaKnown RBP3.18□□□□□ -1.9
VPS13B-208ENST00000521037 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.18□□□□□ -1.9
VPS13B-208ENST00000521037 DCAF12L2Q5VW00 463 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 SAXO2Q658L1 398 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 PPP1R2P3Q6NXS1 205 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 C8orf74Q6P047 294 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 APOOLQ6UXV4 268 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 ADAMTSL5Q6ZMM2 481 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 ZNF813Q6ZN06 617 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 MYPOPQ86VE0 399 aaPredicted RBP3.18□□□□□ -1.9
VPS13B-208ENST00000521037 LRRC6Q86X45 466 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 FAM219AQ8IW50 185 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 ST13P4Q8IZP2 240 aaPredicted RBP3.18□□□□□ -1.9
VPS13B-208ENST00000521037 CSNK2A3Q8NEV1 391 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 OR2L5Q8NG80 312 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 OR51F2Q8NH61 342 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 NANPQ8TBE9 248 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 FAM110BQ8TC76 370 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 RIT1Q92963 219 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 TAAR8Q969N4 342 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 ERGIC1Q969X5 290 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 HAUS1Q96CS2 278 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 OMA1Q96E52 524 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 OTUB1Q96FW1 271 aaPredicted RBP3.18□□□□□ -1.9
VPS13B-208ENST00000521037 ANKRD27Q96NW4 1050 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 PANX3Q96QZ0 392 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 NAP1L3Q99457 506 aaPredicted RBP3.18□□□□□ -1.9
VPS13B-208ENST00000521037 GFI1Q99684 422 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 NARFLQ9H6Q4 476 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 PLAC1Q9HBJ0 212 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 LYRM4Q9HD34 91 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 NGBQ9NPG2 151 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 MMP26Q9NRE1 261 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 CHRAC1Q9NRG0 131 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 FAM114A2Q9NRY5 505 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 PLEK2Q9NYT0 353 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 KLHL13Q9P2N7 655 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 UTS2RQ9UKP6 389 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 FKBP7Q9Y680 259 aa3.18□□□□□ -1.9
VPS13B-208ENST00000521037 IGLV3-32A0A0A0MS00 114 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 ELOVL7A1L3X0 281 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 DUXAA6NLW8 204 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 HACD1B0YJ81 288 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 TRIM49D1C9J1S8 452 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 TRAPPC2LH3BP13 241 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 PEX11AO75192 247 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 GLCEO94923 617 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 OPN1LWP04000 364 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 SERPING1P05155 500 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 SERPIND1P05546 499 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 GSTA1P08263 222 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 OR2T7P0C7T2 308 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 CT45A8P0DMV1 189 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 CT45A9P0DMV2 189 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 IGHV4-38-2P0DP08 117 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 TNNI3P19429 210 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 IL32P24001 234 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 CALCRP30988 508 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 SLC6A6P31641 620 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 MDH1P40925 334 aaKnown RBP3.17□□□□□ -1.9
VPS13B-208ENST00000521037 APOBEC1P41238 236 aaKnown RBP3.17□□□□□ -1.9
VPS13B-208ENST00000521037 MAGEA1P43355 309 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 IER3P46695 156 aa3.17□□□□□ -1.9
VPS13B-208ENST00000521037 FNTAP49354 379 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms