RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 SGK3Q96BR1 496 aa3.08□□□□□ -1.92
PTPN12-214ENST00000520947 LRRC58Q96CX6 371 aa3.08□□□□□ -1.92
PTPN12-214ENST00000520947 BCL7BQ9BQE9 202 aa3.08□□□□□ -1.92
PTPN12-214ENST00000520947 HDHD3Q9BSH5 251 aaPredicted RBP3.08□□□□□ -1.92
PTPN12-214ENST00000520947 C20orf24Q9BUV8 137 aa3.08□□□□□ -1.92
PTPN12-214ENST00000520947 UGT1A7Q9HAW7 530 aa3.08□□□□□ -1.92
PTPN12-214ENST00000520947 UGT1A10Q9HAW8 530 aa3.08□□□□□ -1.92
PTPN12-214ENST00000520947 UGT1A8Q9HAW9 530 aa3.08□□□□□ -1.92
PTPN12-214ENST00000520947 SLCO1B3Q9NPD5 702 aa3.08□□□□□ -1.92
PTPN12-214ENST00000520947 NUP50Q9UKX7 468 aa3.08□□□□□ -1.92
PTPN12-214ENST00000520947 PACSIN2Q9UNF0 486 aaPredicted RBP3.08□□□□□ -1.92
PTPN12-214ENST00000520947 STARD10Q9Y365 291 aa3.08□□□□□ -1.92
PTPN12-214ENST00000520947 MTCL1Q9Y4B5 1905 aaKnown RBP3.07□□□□□ -1.92
PTPN12-214ENST00000520947 IGHV3-64DA0A0J9YX35 117 aa3.07□□□□□ -1.92
PTPN12-214ENST00000520947 NKX2-6A6NCS4 301 aa3.07□□□□□ -1.92
PTPN12-214ENST00000520947 PEX7O00628 323 aa3.07□□□□□ -1.92
PTPN12-214ENST00000520947 LSM1O15116 133 aaKnown RBP3.07□□□□□ -1.92
PTPN12-214ENST00000520947 OR2F2O95006 317 aa3.07□□□□□ -1.92
PTPN12-214ENST00000520947 H6PDO95479 791 aa3.07□□□□□ -1.92
PTPN12-214ENST00000520947 C2P06681 752 aa3.07□□□□□ -1.92
PTPN12-214ENST00000520947 CNR1P21554 472 aa3.07□□□□□ -1.92
PTPN12-214ENST00000520947 MECOMQ03112 1051 aa3.07□□□□□ -1.92
PTPN12-214ENST00000520947 AQP6Q13520 282 aa3.07□□□□□ -1.92
PTPN12-214ENST00000520947 DOC2AQ14183 400 aa3.07□□□□□ -1.92
PTPN12-214ENST00000520947 TGFBIQ15582 683 aa3.07□□□□□ -1.92
PTPN12-214ENST00000520947 SLC8B1Q6J4K2 584 aa3.07□□□□□ -1.92
PTPN12-214ENST00000520947 KATNAL2Q8IYT4 538 aa3.07□□□□□ -1.92
PTPN12-214ENST00000520947 CCDC54Q8NEL0 328 aa3.07□□□□□ -1.92
PTPN12-214ENST00000520947 PLPPR1Q8TBJ4 325 aa3.07□□□□□ -1.92
PTPN12-214ENST00000520947 MCOLN3Q8TDD5 553 aa3.07□□□□□ -1.92
PTPN12-214ENST00000520947 GPR151Q8TDV0 419 aa3.07□□□□□ -1.92
PTPN12-214ENST00000520947 ACMSDQ8TDX5 336 aa3.07□□□□□ -1.92
PTPN12-214ENST00000520947 SDR42E1Q8WUS8 393 aa3.07□□□□□ -1.92
PTPN12-214ENST00000520947 SRSF12Q8WXF0 261 aaKnown RBP3.07□□□□□ -1.92
PTPN12-214ENST00000520947 ISG20Q96AZ6 181 aaKnown RBP3.07□□□□□ -1.92
PTPN12-214ENST00000520947 SH3GL1Q99961 368 aa3.07□□□□□ -1.92
PTPN12-214ENST00000520947 DNTTIP1Q9H147 329 aa3.07□□□□□ -1.92
PTPN12-214ENST00000520947 INPP5EQ9NRR6 644 aa3.07□□□□□ -1.92
PTPN12-214ENST00000520947 PITPNC1Q9UKF7 332 aa3.07□□□□□ -1.92
PTPN12-214ENST00000520947 F11RQ9Y624 299 aaKnown RBP3.07□□□□□ -1.92
PTPN12-214ENST00000520947 WSB1Q9Y6I7 421 aa3.07□□□□□ -1.92
PTPN12-214ENST00000520947 MAP3K15Q6ZN16 1313 aa3.07□□□□□ -1.92
PTPN12-214ENST00000520947 USP47Q96K76 1375 aa3.07□□□□□ -1.92
PTPN12-214ENST00000520947 TNIKQ9UKE5 1360 aa3.07□□□□□ -1.92
PTPN12-214ENST00000520947 A0A1B0GVI7 797 aa3.06□□□□□ -1.92
PTPN12-214ENST00000520947 ZNF726A6NNF4 738 aa3.06□□□□□ -1.92
PTPN12-214ENST00000520947 LAD1O00515 517 aa3.06□□□□□ -1.92
PTPN12-214ENST00000520947 PES1O00541 588 aaKnown RBP3.06□□□□□ -1.92
PTPN12-214ENST00000520947 CLOCKO15516 846 aa3.06□□□□□ -1.92
PTPN12-214ENST00000520947 SPOPO43791 374 aa3.06□□□□□ -1.92
PTPN12-214ENST00000520947 SUPT3HO75486 399 aa3.06□□□□□ -1.92
PTPN12-214ENST00000520947 IGHV3-43DP0DP04 118 aa3.06□□□□□ -1.92
PTPN12-214ENST00000520947 CCNB1P14635 433 aa3.06□□□□□ -1.92
PTPN12-214ENST00000520947 OR1G1P47890 313 aa3.06□□□□□ -1.92
PTPN12-214ENST00000520947 NMUP48645 174 aa3.06□□□□□ -1.92
PTPN12-214ENST00000520947 ACLYP53396 1101 aa3.06□□□□□ -1.92
PTPN12-214ENST00000520947 RSPO1Q2MKA7 263 aaPredicted RBP3.06□□□□□ -1.92
PTPN12-214ENST00000520947 LINC00173Q6ZV60 143 aa3.06□□□□□ -1.92
PTPN12-214ENST00000520947 NIPA1Q7RTP0 329 aa3.06□□□□□ -1.92
PTPN12-214ENST00000520947 CAMK2N1Q7Z7J9 78 aa3.06□□□□□ -1.92
PTPN12-214ENST00000520947 OTUD6BQ8N6M0 293 aa3.06□□□□□ -1.92
PTPN12-214ENST00000520947 FAM104AQ969W3 186 aa3.06□□□□□ -1.92
PTPN12-214ENST00000520947 DNAJC19Q96DA6 116 aa3.06□□□□□ -1.92
PTPN12-214ENST00000520947 GSDMAQ96QA5 445 aa3.06□□□□□ -1.92
PTPN12-214ENST00000520947 PANX1Q96RD7 426 aa3.06□□□□□ -1.92
PTPN12-214ENST00000520947 KCTD14Q9BQ13 255 aaPredicted RBP3.06□□□□□ -1.92
PTPN12-214ENST00000520947 SLC25A39Q9BZJ4 359 aaPredicted RBP3.06□□□□□ -1.92
PTPN12-214ENST00000520947 CDC42EP4Q9H3Q1 356 aaKnown RBP3.06□□□□□ -1.92
PTPN12-214ENST00000520947 ANKRA2Q9H9E1 313 aa3.06□□□□□ -1.92
PTPN12-214ENST00000520947 MYOZ2Q9NPC6 264 aa3.06□□□□□ -1.92
PTPN12-214ENST00000520947 DMAP1Q9NPF5 467 aaPredicted RBP3.06□□□□□ -1.92
PTPN12-214ENST00000520947 CTPS2Q9NRF8 586 aa3.06□□□□□ -1.92
PTPN12-214ENST00000520947 C20orf96Q9NUD7 363 aaPredicted RBP3.06□□□□□ -1.92
PTPN12-214ENST00000520947 ZNF226Q9NYT6 803 aa3.06□□□□□ -1.92
PTPN12-214ENST00000520947 STOX2Q9P2F5 926 aaPredicted RBP3.06□□□□□ -1.92
PTPN12-214ENST00000520947 PEF1Q9UBV8 284 aaKnown RBP3.06□□□□□ -1.92
PTPN12-214ENST00000520947 GNPTGQ9UJJ9 305 aa3.06□□□□□ -1.92
PTPN12-214ENST00000520947 PHLPP2Q6ZVD8 1323 aa3.05□□□□□ -1.92
PTPN12-214ENST00000520947 SUPT3HB4E1H0 165 aa3.05□□□□□ -1.92
PTPN12-214ENST00000520947 GOLGA8TH3BQL2 631 aa3.05□□□□□ -1.92
PTPN12-214ENST00000520947 SOX15O60248 233 aa3.05□□□□□ -1.92
PTPN12-214ENST00000520947 SLC25A27O95847 323 aa3.05□□□□□ -1.92
PTPN12-214ENST00000520947 OTCP00480 354 aa3.05□□□□□ -1.92
PTPN12-214ENST00000520947 IGLV2-23P01705 113 aa3.05□□□□□ -1.92
PTPN12-214ENST00000520947 FGGP02679 453 aa3.05□□□□□ -1.92
PTPN12-214ENST00000520947 ERCC1P07992 297 aaPredicted RBP3.05□□□□□ -1.92
PTPN12-214ENST00000520947 RHOXF2BP0C7M4 288 aa3.05□□□□□ -1.92
PTPN12-214ENST00000520947 PNMA6AP0CW24 399 aaPredicted RBP3.05□□□□□ -1.92
PTPN12-214ENST00000520947 RRM2P31350 389 aa3.05□□□□□ -1.92
PTPN12-214ENST00000520947 NAMPTP43490 491 aa3.05□□□□□ -1.92
PTPN12-214ENST00000520947 CDKN1BP46527 198 aa3.05□□□□□ -1.92
PTPN12-214ENST00000520947 TFPI2P48307 235 aa3.05□□□□□ -1.92
PTPN12-214ENST00000520947 RFX3P48380 749 aa3.05□□□□□ -1.92
PTPN12-214ENST00000520947 RORCP51449 518 aa3.05□□□□□ -1.92
PTPN12-214ENST00000520947 CLDN8P56748 225 aa3.05□□□□□ -1.92
PTPN12-214ENST00000520947 GPX6P59796 221 aa3.05□□□□□ -1.92
PTPN12-214ENST00000520947 RPS21P63220 83 aaKnown RBP3.05□□□□□ -1.92
PTPN12-214ENST00000520947 ZNF92Q03936 586 aa3.05□□□□□ -1.92
PTPN12-214ENST00000520947 ALKBH6Q3KRA9 238 aa3.05□□□□□ -1.92
PTPN12-214ENST00000520947 ZBED5Q49AG3 693 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms