RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 PAQR5Q9NXK6 330 aaPredicted RBP23.13■■□□□ 1.29
COL13A1-213ENST00000520267 ITGB1BP2Q9UKP3 347 aa23.13■■□□□ 1.29
COL13A1-213ENST00000520267 A0A0A6YYJ9 748 aa23.13■■□□□ 1.29
COL13A1-213ENST00000520267 TCRBP04435 133 aa23.13■■□□□ 1.29
COL13A1-213ENST00000520267 YES1P07947 543 aa23.13■■□□□ 1.29
COL13A1-213ENST00000520267 GIFP27352 417 aa23.13■■□□□ 1.29
COL13A1-213ENST00000520267 APOBEC1P41238 236 aaKnown RBP23.13■■□□□ 1.29
COL13A1-213ENST00000520267 SUMO3P55854 103 aaPredicted RBP23.13■■□□□ 1.29
COL13A1-213ENST00000520267 KLF9Q13886 244 aaPredicted RBP23.13■■□□□ 1.29
COL13A1-213ENST00000520267 WDFY1Q8IWB7 410 aa23.13■■□□□ 1.29
COL13A1-213ENST00000520267 ZNF679Q8IYX0 411 aa23.13■■□□□ 1.29
COL13A1-213ENST00000520267 SLC7A5P1Q8MH63 180 aa23.13■■□□□ 1.29
COL13A1-213ENST00000520267 OR8K3Q8NH51 312 aa23.13■■□□□ 1.29
COL13A1-213ENST00000520267 SYNPRQ8TBG9 265 aa23.13■■□□□ 1.29
COL13A1-213ENST00000520267 RNF138Q8WVD3 245 aa23.13■■□□□ 1.29
COL13A1-213ENST00000520267 ASB17Q8WXJ9 295 aa23.13■■□□□ 1.29
COL13A1-213ENST00000520267 AKAP1Q92667 903 aaKnown RBP eCLIP23.13■■□□□ 1.29
COL13A1-213ENST00000520267 TMEM106AQ96A25 262 aa23.13■■□□□ 1.29
COL13A1-213ENST00000520267 GAREM1Q9H706 876 aa23.13■■□□□ 1.29
COL13A1-213ENST00000520267 COA3Q9Y2R0 106 aaPredicted RBP23.13■■□□□ 1.29
COL13A1-213ENST00000520267 FREM3P0C091 2139 aa23.13■■□□□ 1.29
COL13A1-213ENST00000520267 TRABD2BA6NFA1 517 aa23.12■■□□□ 1.29
COL13A1-213ENST00000520267 TMEM127O75204 238 aa23.12■■□□□ 1.29
COL13A1-213ENST00000520267 MPZL1O95297 269 aa23.12■■□□□ 1.29
COL13A1-213ENST00000520267 ONECUT2O95948 504 aa23.12■■□□□ 1.29
COL13A1-213ENST00000520267 WNT11O96014 354 aa23.12■■□□□ 1.29
COL13A1-213ENST00000520267 CALCBP10092 127 aa23.12■■□□□ 1.29
COL13A1-213ENST00000520267 HOXA6P31267 233 aa23.12■■□□□ 1.29
COL13A1-213ENST00000520267 CDK10Q15131 360 aa23.12■■□□□ 1.29
COL13A1-213ENST00000520267 FAM69BQ5VUD6 431 aa23.12■■□□□ 1.29
COL13A1-213ENST00000520267 TIGD3Q6B0B8 471 aa23.12■■□□□ 1.29
COL13A1-213ENST00000520267 FDX2Q6P4F2 183 aa23.12■■□□□ 1.29
COL13A1-213ENST00000520267 OR5L2Q8NGL0 311 aa23.12■■□□□ 1.29
COL13A1-213ENST00000520267 OR6S1Q8NH40 331 aa23.12■■□□□ 1.29
COL13A1-213ENST00000520267 PPP1R14AQ96A00 147 aa23.12■■□□□ 1.29
COL13A1-213ENST00000520267 GDF9O60383 454 aa23.12■■□□□ 1.29
COL13A1-213ENST00000520267 PNPP00491 289 aa23.12■■□□□ 1.29
COL13A1-213ENST00000520267 PDGFBP01127 241 aaPredicted RBP23.12■■□□□ 1.29
COL13A1-213ENST00000520267 GDNFP39905 211 aa23.12■■□□□ 1.29
COL13A1-213ENST00000520267 BLVRAP53004 296 aa23.12■■□□□ 1.29
COL13A1-213ENST00000520267 RPS15P62841 145 aaKnown RBP23.12■■□□□ 1.29
COL13A1-213ENST00000520267 PHF19Q5T6S3 580 aa23.12■■□□□ 1.29
COL13A1-213ENST00000520267 TMPRSS12Q86WS5 348 aa23.12■■□□□ 1.29
COL13A1-213ENST00000520267 DND1Q8IYX4 353 aaKnown RBP23.12■■□□□ 1.29
COL13A1-213ENST00000520267 ZNF248Q8NDW4 579 aa23.12■■□□□ 1.29
COL13A1-213ENST00000520267 MFSD8Q8NHS3 518 aa23.12■■□□□ 1.29
COL13A1-213ENST00000520267 KLRF1Q9NZS2 232 aa23.12■■□□□ 1.29
COL13A1-213ENST00000520267 SLC22A13Q9Y226 551 aa23.12■■□□□ 1.29
COL13A1-213ENST00000520267 FAM172BPA6NC97 362 aa23.11■■□□□ 1.29
COL13A1-213ENST00000520267 MT-ND4P03905 459 aa23.11■■□□□ 1.29
COL13A1-213ENST00000520267 RAF1P04049 648 aa23.11■■□□□ 1.29
COL13A1-213ENST00000520267 NAGAP17050 411 aa23.11■■□□□ 1.29
COL13A1-213ENST00000520267 CCR6P51684 374 aa23.11■■□□□ 1.29
COL13A1-213ENST00000520267 ZP4Q12836 540 aa23.11■■□□□ 1.29
COL13A1-213ENST00000520267 LYPD8Q6UX82 237 aa23.11■■□□□ 1.29
COL13A1-213ENST00000520267 MDGA2Q7Z553 956 aa23.11■■□□□ 1.29
COL13A1-213ENST00000520267 RNF128Q8TEB7 428 aa23.11■■□□□ 1.29
COL13A1-213ENST00000520267 TTC9Q92623 222 aa23.11■■□□□ 1.29
COL13A1-213ENST00000520267 FOXJ3Q9UPW0 622 aa23.11■■□□□ 1.29
COL13A1-213ENST00000520267 NUBP2Q9Y5Y2 271 aa23.11■■□□□ 1.29
COL13A1-213ENST00000520267 GPR171O14626 319 aa23.11■■□□□ 1.29
COL13A1-213ENST00000520267 EIF2B1Q14232 305 aaKnown RBP23.11■■□□□ 1.29
COL13A1-213ENST00000520267 TMEM205Q6UW68 189 aa23.11■■□□□ 1.29
COL13A1-213ENST00000520267 ASB10Q8WXI3 467 aa23.11■■□□□ 1.29
COL13A1-213ENST00000520267 ABHD6Q9BV23 337 aa23.11■■□□□ 1.29
COL13A1-213ENST00000520267 CACNG6Q9BXT2 260 aa23.11■■□□□ 1.29
COL13A1-213ENST00000520267 MYOTQ9UBF9 498 aa23.11■■□□□ 1.29
COL13A1-213ENST00000520267 ANXA2P2A6NMY6 339 aa23.1■■□□□ 1.29
COL13A1-213ENST00000520267 H0YC42 278 aa23.1■■□□□ 1.29
COL13A1-213ENST00000520267 RAD1O60671 282 aa23.1■■□□□ 1.29
COL13A1-213ENST00000520267 ZFAND5O76080 213 aa23.1■■□□□ 1.29
COL13A1-213ENST00000520267 CFIP05156 583 aa23.1■■□□□ 1.29
COL13A1-213ENST00000520267 ANXA2P07355 339 aaKnown RBP23.1■■□□□ 1.29
COL13A1-213ENST00000520267 IFNGR1P15260 489 aa23.1■■□□□ 1.29
COL13A1-213ENST00000520267 CRABP1P29762 137 aa23.1■■□□□ 1.29
COL13A1-213ENST00000520267 PTGDSP41222 190 aa23.1■■□□□ 1.29
COL13A1-213ENST00000520267 ROM1Q03395 351 aa23.1■■□□□ 1.29
COL13A1-213ENST00000520267 MAMSTRQ6ZN01 415 aa23.1■■□□□ 1.29
COL13A1-213ENST00000520267 H1FNTQ75WM6 255 aaPredicted RBP23.1■■□□□ 1.29
COL13A1-213ENST00000520267 KRT77Q7Z794 578 aa23.1■■□□□ 1.29
COL13A1-213ENST00000520267 WDR5BQ86VZ2 330 aa23.1■■□□□ 1.29
COL13A1-213ENST00000520267 MCHR2Q969V1 340 aa23.1■■□□□ 1.29
COL13A1-213ENST00000520267 IER2Q9BTL4 223 aa23.1■■□□□ 1.29
COL13A1-213ENST00000520267 MRI1Q9BV20 369 aa23.1■■□□□ 1.29
COL13A1-213ENST00000520267 ING3Q9NXR8 418 aa23.1■■□□□ 1.29
COL13A1-213ENST00000520267 MRPL15Q9P015 296 aaKnown RBP23.1■■□□□ 1.29
COL13A1-213ENST00000520267 GTF2A1LQ9UNN4 478 aa23.1■■□□□ 1.29
COL13A1-213ENST00000520267 EFNA2O43921 213 aa23.1■■□□□ 1.29
COL13A1-213ENST00000520267 OR2J2O76002 312 aa23.1■■□□□ 1.29
COL13A1-213ENST00000520267 DHFRP00374 187 aa23.1■■□□□ 1.29
COL13A1-213ENST00000520267 SDHBP21912 280 aa23.1■■□□□ 1.29
COL13A1-213ENST00000520267 TCEA1P23193 301 aaKnown RBP23.1■■□□□ 1.29
COL13A1-213ENST00000520267 PTH2RP49190 550 aa23.1■■□□□ 1.29
COL13A1-213ENST00000520267 DLX5P56178 289 aa23.1■■□□□ 1.29
COL13A1-213ENST00000520267 FMODQ06828 376 aa23.1■■□□□ 1.29
COL13A1-213ENST00000520267 TEX30Q5JUR7 227 aa23.1■■□□□ 1.29
COL13A1-213ENST00000520267 OR7E24Q6IFN5 339 aa23.1■■□□□ 1.29
COL13A1-213ENST00000520267 OR10G3Q8NGC4 313 aa23.1■■□□□ 1.29
COL13A1-213ENST00000520267 OR52I2Q8NH67 350 aa23.1■■□□□ 1.29
COL13A1-213ENST00000520267 IFI44Q8TCB0 444 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms