RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 PRR32B1ATL7 298 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 C2CD4DB7Z1M9 353 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 ALG1L2C9J202 215 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 NPIPB4C9JG80 1138 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 ATP6V1G2-DDX39BF2Z307 99 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 GABARAPH6UMI1 98 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 TRIM77I1YAP6 450 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 ZNF264O43296 627 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 CDC40O60508 579 aaKnown RBP eCLIP4.56□□□□□ -1.68
SDC2-204ENST00000519914 TSPAN2O60636 221 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 PRAF2O60831 178 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 NPIPB7O75200 414 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 ZNF780AO75290 641 aaPredicted RBP4.56□□□□□ -1.68
SDC2-204ENST00000519914 MT-ATP6P00846 226 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 BGLAPP02818 100 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 PLA2G1BP04054 148 aaKnown RBP4.56□□□□□ -1.68
SDC2-204ENST00000519914 TCRBP04435 133 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 MRPL3P09001 348 aaKnown RBP4.56□□□□□ -1.68
SDC2-204ENST00000519914 DBHP09172 617 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 TACSTD2P09758 323 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 CTSEP14091 401 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 ATF4P18848 351 aaPredicted RBP4.56□□□□□ -1.68
SDC2-204ENST00000519914 SRMP19623 302 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 EDNRAP25101 427 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 CD27P26842 260 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 MST1P26927 711 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 MAPK3P27361 379 aaPredicted RBP4.56□□□□□ -1.68
SDC2-204ENST00000519914 RORAP35398 523 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 ACVR1BP36896 505 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 CDKN2AP42771 156 aaKnown RBP4.56□□□□□ -1.68
SDC2-204ENST00000519914 STARP49675 285 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 CD83Q01151 205 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 FLI1Q01543 452 aaPredicted RBP4.56□□□□□ -1.68
SDC2-204ENST00000519914 DHODHQ02127 395 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 LTBQ06643 244 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 DMWDQ09019 674 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 ALKBH1Q13686 389 aaKnown RBP4.56□□□□□ -1.68
SDC2-204ENST00000519914 ZNF267Q14586 743 aaPredicted RBP4.56□□□□□ -1.68
SDC2-204ENST00000519914 GRM7Q14831 915 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 NTRK2Q16620 822 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 TP53I3Q53FA7 332 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 EEF1A1P5Q5VTE0 462 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 YOD1Q5VVQ6 348 aaPredicted RBP4.56□□□□□ -1.68
SDC2-204ENST00000519914 ZNF57Q68EA5 555 aaPredicted RBP4.56□□□□□ -1.68
SDC2-204ENST00000519914 FAM199XQ6PEV8 388 aaPredicted RBP4.56□□□□□ -1.68
SDC2-204ENST00000519914 C5orf46Q6UWT4 87 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 ARSKQ6UWY0 536 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 GLRX5Q86SX6 157 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 GLCCI1Q86VQ1 547 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 SFTPA2Q8IWL1 248 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 C9orf62Q8N4C0 152 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 CADM4Q8NFZ8 388 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 OR5H6Q8NGV6 325 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 OR4C3Q8NH37 302 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 OR51Q1Q8NH59 317 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 OR56B4Q8NH76 319 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 ZPLD1Q8TCW7 415 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 DOK4Q8TEW6 326 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 ZNF721Q8TF20 911 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 PTPMT1Q8WUK0 201 aaPredicted RBP4.56□□□□□ -1.68
SDC2-204ENST00000519914 HMGB4Q8WW32 186 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 ZNRF4Q8WWF5 429 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 RGP1Q92546 391 aaPredicted RBP4.56□□□□□ -1.68
SDC2-204ENST00000519914 HAVCR1Q96D42 359 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 ZMYND19Q96E35 227 aaPredicted RBP4.56□□□□□ -1.68
SDC2-204ENST00000519914 ARSGQ96EG1 525 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 RADILQ96JH8 1075 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 GPR137Q96N19 417 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 MAP3K3Q99759 626 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 ALG12Q9BV10 488 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 RERGLQ9H628 205 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 RANBP3Q9H6Z4 567 aaPredicted RBP4.56□□□□□ -1.68
SDC2-204ENST00000519914 PDE7BQ9NP56 450 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 STARD5Q9NSY2 213 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 MCUBQ9NWR8 336 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 C2orf42Q9NWW7 574 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 SLCO1C1Q9NYB5 712 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 HCN3Q9P1Z3 774 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 MALT1Q9UDY8 824 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 MRTO4Q9UKD2 239 aaKnown RBP4.56□□□□□ -1.68
SDC2-204ENST00000519914 ERVK-19Q9WJR5 959 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 TMEM184BQ9Y519 407 aaPredicted RBP4.56□□□□□ -1.68
SDC2-204ENST00000519914 KLF2Q9Y5W3 355 aaPredicted RBP4.56□□□□□ -1.68
SDC2-204ENST00000519914 AUP1Q9Y679 476 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 TMEM14AQ9Y6G1 99 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 CLCA3PQ9Y6N3 262 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 LAMA3Q16787 3333 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 SPTBN5Q9NRC6 3674 aaKnown RBP4.56□□□□□ -1.68
SDC2-204ENST00000519914 BRWD1Q9NSI6 2320 aa4.56□□□□□ -1.68
SDC2-204ENST00000519914 MEIKINA0A087WXM9 373 aa4.55□□□□□ -1.68
SDC2-204ENST00000519914 TRBV2A0A0J9YWF9 115 aa4.55□□□□□ -1.68
SDC2-204ENST00000519914 A0A1B0GUH1 482 aa4.55□□□□□ -1.68
SDC2-204ENST00000519914 TCRBV16S1A1N1A0A5B0 115 aa4.55□□□□□ -1.68
SDC2-204ENST00000519914 LINC00862A6NCI5 91 aa4.55□□□□□ -1.68
SDC2-204ENST00000519914 TRABD2BA6NFA1 517 aa4.55□□□□□ -1.68
SDC2-204ENST00000519914 TMEM212A6NML5 194 aa4.55□□□□□ -1.68
SDC2-204ENST00000519914 OR4C45A6NMZ5 311 aa4.55□□□□□ -1.68
SDC2-204ENST00000519914 A8MV72 311 aaPredicted RBP4.55□□□□□ -1.68
SDC2-204ENST00000519914 LMO7DNF2Z398 122 aa4.55□□□□□ -1.68
SDC2-204ENST00000519914 SCDO00767 359 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms