RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 PIWIL3Q7Z3Z3 882 aaKnown RBP7.07□□□□□ -1.28
CTNNA1-215ENST00000519309 FUNDC1Q8IVP5 155 aa7.07□□□□□ -1.28
CTNNA1-215ENST00000519309 UEVLDQ8IX04 471 aa7.07□□□□□ -1.28
CTNNA1-215ENST00000519309 C11orf40Q8WZ69 217 aa7.07□□□□□ -1.28
CTNNA1-215ENST00000519309 SLC38A4Q969I6 547 aa7.07□□□□□ -1.28
CTNNA1-215ENST00000519309 SLC25A36Q96CQ1 311 aa7.07□□□□□ -1.28
CTNNA1-215ENST00000519309 KTI12Q96EK9 354 aaPredicted RBP7.07□□□□□ -1.28
CTNNA1-215ENST00000519309 DIRC2Q96SL1 478 aa7.07□□□□□ -1.28
CTNNA1-215ENST00000519309 PATZ1Q9HBE1 687 aaKnown RBP7.07□□□□□ -1.28
CTNNA1-215ENST00000519309 NPHS2Q9NP85 383 aa7.07□□□□□ -1.28
CTNNA1-215ENST00000519309 NKIRAS1Q9NYS0 192 aa7.07□□□□□ -1.28
CTNNA1-215ENST00000519309 IL20RAQ9UHF4 553 aa7.07□□□□□ -1.28
CTNNA1-215ENST00000519309 ZNF443Q9Y2A4 671 aaPredicted RBP7.07□□□□□ -1.28
CTNNA1-215ENST00000519309 POFUT2Q9Y2G5 429 aa7.07□□□□□ -1.28
CTNNA1-215ENST00000519309 CHST2Q9Y4C5 530 aa7.07□□□□□ -1.28
CTNNA1-215ENST00000519309 NPTNQ9Y639 398 aa7.07□□□□□ -1.28
CTNNA1-215ENST00000519309 USH1CQ9Y6N9 552 aa7.07□□□□□ -1.28
CTNNA1-215ENST00000519309 NOTCH3Q9UM47 2321 aa7.07□□□□□ -1.28
CTNNA1-215ENST00000519309 MDFIC2A0A1B0GVS7 189 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 C5orf63A6NC05 138 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 ZSCAN5BA6NJL1 495 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 RFXANKO14593 260 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 TPD52L2O43399 206 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 ERLIN1O75477 346 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 SLC22A3O75751 556 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 GPANK1O95872 356 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 NUDT7P0C024 238 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 IDO1P14902 403 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 SLC6A9P48067 706 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 IDH3AP50213 366 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 PROK1P58294 105 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 SEC61A1P61619 476 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 TSTQ16762 297 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 TBC1D28Q2M2D7 210 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 C2orf68Q2NKX9 166 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 TMEM255AQ5JRV8 349 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 SAMD5Q5TGI4 173 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 SLC2A7Q6PXP3 512 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 H1FNTQ75WM6 255 aaPredicted RBP7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 DPPA2Q7Z7J5 298 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 COMTD1Q86VU5 262 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 VRK2Q86Y07 508 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 SKA3Q8IX90 412 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 MSRB3Q8IXL7 192 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 KIRREL3Q8IZU9 778 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 KLHL36Q8N4N3 616 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 SCAIQ8N9R8 606 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 VPS37AQ8NEZ2 397 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 BHLHE22Q8NFJ8 381 aaPredicted RBP7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 OR52E2Q8NGJ4 325 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 OR6S1Q8NH40 331 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 OR52P1PQ8NH57 321 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 FGFBP3Q8TAT2 258 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 CCL17Q92583 94 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 GTF2H4Q92759 462 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 ATP6V1G3Q96LB4 118 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 PAIP1Q9H074 479 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 CDH20Q9HBT6 801 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 A4GALTQ9NPC4 353 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 SLC25A37Q9NYZ2 338 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 SLAMF8Q9P0V8 285 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 KLHL14Q9P2G3 628 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 OR5V1Q9UGF6 321 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 LRCH1Q9Y2L9 728 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 POMT1Q9Y6A1 747 aa7.06□□□□□ -1.28
CTNNA1-215ENST00000519309 IGKV1D-42A0A075B6H8 117 aa7.05□□□□□ -1.28
CTNNA1-215ENST00000519309 TRAV36DV7A0A075B6V5 113 aa7.05□□□□□ -1.28
CTNNA1-215ENST00000519309 A0A087WUJ7 227 aa7.05□□□□□ -1.28
CTNNA1-215ENST00000519309 MS4A18H0YCH9 400 aa7.05□□□□□ -1.28
CTNNA1-215ENST00000519309 H3BSA7 217 aa7.05□□□□□ -1.28
CTNNA1-215ENST00000519309 UBDO15205 165 aa7.05□□□□□ -1.28
CTNNA1-215ENST00000519309 ICMTO60725 284 aa7.05□□□□□ -1.28
CTNNA1-215ENST00000519309 SASH3O75995 380 aa7.05□□□□□ -1.28
CTNNA1-215ENST00000519309 CRYBA1P05813 215 aa7.05□□□□□ -1.28
CTNNA1-215ENST00000519309 LCKP06239 509 aa7.05□□□□□ -1.28
CTNNA1-215ENST00000519309 BCHEP06276 602 aa7.05□□□□□ -1.28
CTNNA1-215ENST00000519309 NR2F1P10589 423 aa7.05□□□□□ -1.28
CTNNA1-215ENST00000519309 HLA-DOBP13765 273 aa7.05□□□□□ -1.28
CTNNA1-215ENST00000519309 NCF2P19878 526 aaPredicted RBP7.05□□□□□ -1.28
CTNNA1-215ENST00000519309 CPT2P23786 658 aa7.05□□□□□ -1.28
CTNNA1-215ENST00000519309 CD80P33681 288 aa7.05□□□□□ -1.28
CTNNA1-215ENST00000519309 POLR2JP52435 117 aaKnown RBP7.05□□□□□ -1.28
CTNNA1-215ENST00000519309 AQP5P55064 265 aa7.05□□□□□ -1.28
CTNNA1-215ENST00000519309 UCP2P55851 309 aa7.05□□□□□ -1.28
CTNNA1-215ENST00000519309 GLO1Q04760 184 aa7.05□□□□□ -1.28
CTNNA1-215ENST00000519309 DEFB112Q30KQ8 113 aa7.05□□□□□ -1.28
CTNNA1-215ENST00000519309 MS4A18Q3C1V0 323 aa7.05□□□□□ -1.28
CTNNA1-215ENST00000519309 NRN1LQ496H8 165 aa7.05□□□□□ -1.28
CTNNA1-215ENST00000519309 ZMAT1Q5H9K5 638 aa7.05□□□□□ -1.28
CTNNA1-215ENST00000519309 PAGE3Q5JUK9 113 aa7.05□□□□□ -1.28
CTNNA1-215ENST00000519309 CARD17Q5XLA6 110 aa7.05□□□□□ -1.28
CTNNA1-215ENST00000519309 ZNF774Q6NX45 483 aa7.05□□□□□ -1.28
CTNNA1-215ENST00000519309 FIP1L1Q6UN15 594 aaKnown RBP7.05□□□□□ -1.28
CTNNA1-215ENST00000519309 ZNF771Q7L3S4 317 aaPredicted RBP7.05□□□□□ -1.28
CTNNA1-215ENST00000519309 NET1Q7Z628 596 aaPredicted RBP7.05□□□□□ -1.28
CTNNA1-215ENST00000519309 SERPINA11Q86U17 422 aa7.05□□□□□ -1.28
CTNNA1-215ENST00000519309 CLIP4Q8N3C7 705 aa7.05□□□□□ -1.28
CTNNA1-215ENST00000519309 SLC22A24Q8N4F4 322 aa7.05□□□□□ -1.28
CTNNA1-215ENST00000519309 ZNF283Q8N7M2 679 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms